Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00551 ATGGCTAATTGGTGGAGAAAAGAGAGCCATAAAGGAACCCCTGTTGTTGTAAAGATGGAGAATCCCAACTGGTCAATGGTTGAACTTCAAGGCCCTTCCGATGATGACTTCATTATCGCCGCCGAGTCGCCGCCGGGTAGAATCAGAGAGAAAGGACGAGGAAAAAACGCCAAGCAACTCACTTGGGTTCTTCTTCTTAAAGCTCATAAGGCTGCCGATTGTTTAACCTCCATTGGCTCAGCATTGGTTAACATCGGCGCTGCTGTTAAACGCCGTGTTGCTTCCGGTAAAACCGATGCCGACCTCGACAACGACAATGACAACGCCGACAGCGGCGAGAGGGAAAACCCAACTGTCAAAACCAGGTTTTATTTGTTTATTAAGATTTTCCTTTGGGTGTCGGTGGGTCTATTAGGGTTTGAAGTGGCGGCGTATTACAAGGGCTGGCATTTTAGGGCACCCCATCTTGAATTGAACTACTTCTGGACATACCCATTTGGGGTTAAGGATGTTTTTGATTGGATTTACTCGAAATGGGTTGTGATTCGTGTGGATTATTTTGCTCCTCCTCTCCAGTTTTTGGCCAATGTTTGTATAGTGTTGTTCCTCATTCAAACTCTGGATAGGTTGATTCTTTGTTTGGGTTGTTTCTGGATCCGCTTCAAGAAAATCAAACCAGTTCCGAATGCTTCGGCCTTCGATCTTGAATCTGGAGAGACTGGTTACTTCCCTATGGTTCTTGTTCAGATCCCAATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTAGACTGGCCAAAAGACAAGTTACTGATTCAGGTTCTCGACGACTCGGATGATCCAATCACCGTATTGCTGATCCAAGAGGAGGTTCGTAAATGGCAGCAACTCGATGCCAACATCGTGTACCGACATAGAGTGATTCGAGAGGGGTATAAGGCAGGCAATCTCAAGTCTGCCATGAGTTGCAGCTATGTCAAAGACTATGAATTTGTTGCTATCTTTGATGCTGATTTTCAGCCTGCCTCTGATTTCCTTAAAAGAACACTTCCTCATTTTAAGGATAATGAGGAACTTGGACTTGTTCAAGCGCGGTGGTCGTTCGTAAACAAGGACGAGAACTTGTTAACCCGACTGCAGAACATTAACTTAGCCTTCCATTTCGAGGTGGAGCAACAGGTTAATGGAGTTTTTCTTAATTTCTTTGGATTCAATGGCACTGCTGGTGTTTGGAGGATTAAGGCTCTTGAAGAAGCCGGTGGATGGCTGGAAAGAACCACGGTTGAGGACATGGACATTGCGGTTCGTGCTCATCTTCATGGCTGGAAATTCATATTCCTCAACGATGTAGAGTGCCAATGTGAATTACCCGAATCGTATGAAGCGTATAGAAAACAGCAGCACCGATGGCATTCTGGACCGATGCAATTGTTTCGTCTTTGTTTGCCTGATATCGTTCGATCAAAGATTGGCATATGGAAGAAATTCAACTTGATCTTCCTGTTCTTTCTGCTACGAAAGCTGATATTACCGTTTTATTCGTTTACACTCTTCTGCATTATTCTTCCAATGACAATGTTCGTTCCCGAAGCCGTGTTACCTGCGTGGGTCGTATGTTACATTCCAGCCACCATGTCTTTTCTCAACATTCTTCCAGCACCAAAGTTCTTCCCTTTCATTGTCCCTTACCTCCTTTTCGAGAACACAATGTCAGTAACAAAGTTCAATGCAATGGTTTCGGGACTTTTTCAACTCGGCAGTGCATACGAATGGGTCGTTACGAAGAAATCAGGTCGATCCTCCGAGGGTGATCTCGTCTCGATGGTCGGGAAAAAAGAGTTGAACACTGAAAAGAGTGCATCAGCTAACAACCTTGAGGAGATTGAGTTAATACAAAAACAGGACAACAATTTGTCGAAGAAGAAGCATAATAGAATATACATGAAGGAACTAGCATTGGCTTTCCTTCTCCTAACAGCCTCAGCTAGAAGCCTTCTCTCAGCTCAAGGGATTCATTTCTACTTCTTGATGTTTCAAGGAATATCCTTTCTCCTCGTCGGTCTCGACTTGATCGGCGAGCAGGTTGTTTGA 2109 44.33 MANWWRKESHKGTPVVVKMENPNWSMVELQGPSDDDFIIAAESPPGRIREKGRGKNAKQLTWVLLLKAHKAADCLTSIGSALVNIGAAVKRRVASGKTDADLDNDNDNADSGERENPTVKTRFYLFIKIFLWVSVGLLGFEVAAYYKGWHFRAPHLELNYFWTYPFGVKDVFDWIYSKWVVIRVDYFAPPLQFLANVCIVLFLIQTLDRLILCLGCFWIRFKKIKPVPNASAFDLESGETGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDPITVLLIQEEVRKWQQLDANIVYRHRVIREGYKAGNLKSAMSCSYVKDYEFVAIFDADFQPASDFLKRTLPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSKIGIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAVLPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLVSMVGKKELNTEKSASANNLEEIELIQKQDNNLSKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLMFQGISFLLVGLDLIGEQVV 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3402529 3405753 - CmoCh12G005510.1 Cmo12g00551 393239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00551 702 PANTHER - 8 701 - -
Cmo12g00551 702 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 8 701 - -
Cmo12g00551 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
Cmo12g00551 702 Pfam Glycosyl transferase family group 2 338 543 IPR001173 -
Cmo12g00551 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 539 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01821 Cmo12g00551 CCT
Cmo09g00311 Cmo12g00551 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g00551 Cmo-Chr12:3402529 Cmo15g00330 Cmo-Chr15:1534075 0 dispersed
Cmo01g01821 Cmo-Chr1:13352801 Cmo12g00551 Cmo-Chr12:3402529 0 wgd
Cmo12g00551 Cmo-Chr12:3402529 Cmo09g00311 Cmo-Chr9:1348139 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00551 - - csv:101203245 1263.83