Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00576 ATGTTGAAGGTTTCCTCCTCATCTGACTGCATTTCCATCTTCATCTCTCTTCTTCTCCTCTCACTTCCTTCCACCGCTCTCGCCCTCTCCGACGCGGATCACCTGGTTCTCGCTAACGCTACTCTCCAGTCTAGTAATGTATCCAGTCCGAGGAATAAGGAGGGTAGTTTTGCTGACATAATTGATCGTGCTTTGGAGAATGAGTTCAAGGAGAATGAGCAGAATGAAGCAACTGATGCAGGAGGCTTCAACAACAGCGTAGCGGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAGTGATAATGGAGCTGAAGACACTCCTACATTGATTGATCGGAAGGACAATGTCTTTATCATATCCAACTTCAAGTCTAAATATCCAGTGCTGCAGCTAGACTTGAGATTGATCTCAGATTTGGTTATCGTTATTGTCTCTGCAACTTGTGGTGGCAATTGCCTTCGCCTGTGCTGGACAACCAGTATGATTATTTTTTACCTAAGCTATTTGATGGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGGCCTGGAGGATTTAATTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTGGCACAATTTGGTGTAGTTTTTCTTCTTTTTGCACTGGGGTTGGAGTTTTCAACAACTAAGCTTCGAGTTGTTCGTGCAGTTGCAGTCCTTGGTGGCCTGCTCCAAATTATCCTATTTATGTGCCTCAGTGGGATCATAGCCTCGTCATGCGGTGGGAGTGCTTCTGAAGGAGTTTTTGTTGGAGCATTTCTATCAATGTCCTCAACGGCAGTGGTGCTGAAATTTTTGATGGAAAAGAATTCGACAAATGCTCTTCATGGACAAGTCACGATCGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTTTTTGCTTTGCTTCCAGTGCTGGGTGGGAATTCTGGTATTCTTCAGGGAGTGATATCCATGAGTAAAGTGTTGGTGATCTTGGTTACTTTTTGGGTTGTTTTGTCAATTTTATCCCGTACATGTATTCCTTGGTTCTTAAAATTGATGATAAGTCTATCATCACAGACCAACGAACTCTATCAATTAGCATCAGTGGCATTCTGCTTGCTTGTAGCGTGGTGTAGTGATAAGTTAGGGCTAAGTCTAGAATTGGGCTCCTTTGCTGCTGGAGTTATGATATCAACAACTGATCTTGCTCAACATACCTTCGAACAAATAGAGCCTATAAGGAACTTCTTTGCGGCCCTTTTTCTTGCCAGCATTGGAATGCTGATCAACGTTCAGTTTTTGTGGAACCATGTTGATATATTGCTTGCAGCTGTTATACTAGTAATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGGTACAACAACAGGACGTCACTTCTGGTTGGAATGTCTCTGGCTCAGATAGGGGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTTCATCTAGTAGAGGGAAAACTGTATCTGTTGCTTATTGGGACCACAGCCCTTAGTCTGTCGAGCCTTGTCCAAGAATTGACTGCTATAGATGGTTCATACAAGAAGGTTACAACTCCTCTTCTTTTCAAGCTGATACCTGCTGTAGTGCACTTAGGCGTGCTATTGCGGTGGTTCTCTCCAGACGGTCTCGTTGAGATTGGATTTAAAGGAGACATCATCCGCCCGGACAGTGTAAAGCAGCGAGTTATGTTGATAGTTCAGGGACCTCATGATTCATGA 1827 43.13 MLKVSSSSDCISIFISLLLLSLPSTALALSDADHLVLANATLQSSNVSSPRNKEGSFADIIDRALENEFKENEQNEATDAGGFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDSDNGAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGNCLRLCWTTSMIIFYLSYLMVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVVFLLFALGLEFSTTKLRVVRAVAVLGGLLQIILFMCLSGIIASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVISMSKVLVILVTFWVVLSILSRTCIPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTFEQIEPIRNFFAALFLASIGMLINVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLSSLVQELTAIDGSYKKVTTPLLFKLIPAVVHLGVLLRWFSPDGLVEIGFKGDIIRPDSVKQRVMLIVQGPHDS 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3555280 3565362 - CmoCh12G005760.1 Cmo12g00576 393264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00576 608 PANTHER K(+) EFFLUX ANTIPORTER 6 19 608 - -
Cmo12g00576 608 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 19 608 IPR045158 GO:0015386|GO:0071805|GO:1902600
Cmo12g00576 608 Pfam Sodium/hydrogen exchanger family 187 535 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo12g00576 608 Gene3D - 178 545 IPR038770 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00738 Cmo12g00576 CCT
Cmo11g00694 Cmo12g00576 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g00576 Cmo-Chr12:3555280 Cmo18g01218 Cmo-Chr18:12098474 0 dispersed
Cmo10g00738 Cmo-Chr10:3378959 Cmo12g00576 Cmo-Chr12:3555280 0 wgd
Cmo11g00694 Cmo-Chr11:3352763 Cmo12g00576 Cmo-Chr12:3555280 5.39E-87 wgd
Cmo12g00576 Cmo-Chr12:3555280 Cmo05g00106 Cmo-Chr5:420474 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00576 - - csv:101217282 926.776