Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g00651 | ATGTCTGTATGGGGTTGGGTTGGCCAGATTTATGCGATGTCCTCACCACTCTGTTCGTCAATTCGGGCATTGGCACCGCAGTGTTGGCGGCGGACGAACTTGAGATTCTTCATATTGCTTCAATCCAAGAGATGTGTAGGCTTCGCGCCTCGCTTCGTTGCTTGTTTGAGCAGCAATGACGACTCTGTTGCAATCCCCAAACCGGTGCCGCTCGCCTTCGATCCTGTGGAGGAGATGTACGGACTTGGCGTCGATTTAAAACCAAGGAATTCAAATTCCAGCGCTCCTGAACCCAGGTCCTGGTTTGGTCCAAATGGTCAGTATATTAGAGAGCTACCGTGTCCAAGTTGCCGAGGCAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCAGACTGTTCCGTGTGTAATGGAAAGGGTATAGTGACCTGCCACCAATGCTTGGGAGATCGTGTCATATGGGAAGAGTCCATTGATGAACGACCATGGGAGAAAGCACGCTCCACTTCTCCATTAAGAATGAAGGAAGACGATGAAGTTGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCGAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGATTGAAGATCAGCCGATCATTAAAAAGTCTCAATGCCAAAACAGGTCTATTTAGTAAGAGAATGAAGATAATCCATCGTGACCCCACTCTTCATGCCCAGAGAGTGGCTGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCCAGAAAACGTACTTCTGAAGCTTTGAAAGCATTCTTCAGTGATCCAAAAAATCGTCAAAAGCGGAGCATTGCAATGAAAGGAATAAAATTTTACTGTAAAAACTGTGGACGTGAGGGGCATCGAAGACACTATTGTCCAGAACTTAAGGGTGATTCAATTGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGAAGGACCTGTAAGAAGTCTAGGTTGAATGGTAAACCGATGAGCGCAACAATTCAGTGTCATTGCACGATATGTGGTGGTAAGGGTCACAGCAGTAGGAACTGTTCGAAGTCCGAGATGAGAAATTCAAATAAAGGTATACATTATCCCCAACATCAGAATCCTGGCAATGTGTTGAGCCTGAATTTGATCAAGGGAGATAGGATGACTAATGAAAGCAGCAGAGTGAGGCAGTATCGTTGTAGGATCTGCGAAGAAAATGGTCACAATCGGCAGAATTGTCCCAATATCGACACGAAAGTTAACCATACAACTCGTAGAAGAACATACAGCTGCAAACTATGTCATGAAAAAGGGCATAACAGTAGAACATGCCCAGTTATAAAGATGAACAATCTGTAG | 1374 | 45.12 | MSVWGWVGQIYAMSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENGHNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL | 457 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 4187024 | 4199488 | + | CmoCh12G006510.1 | Cmo12g00651 | 393339 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g00651 | 457 | ProSiteProfiles | Zinc finger CCHC-type profile. | 288 | 303 | IPR001878 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | PANTHER | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | 20 | 366 | - | - | |
Cmo12g00651 | 457 | SUPERFAMILY | Retrovirus zinc finger-like domains | 286 | 332 | IPR036875 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | SUPERFAMILY | Retrovirus zinc finger-like domains | 395 | 427 | IPR036875 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | Gene3D | - | 392 | 452 | - | - | |
Cmo12g00651 | 457 | Gene3D | - | 285 | 339 | - | - | |
Cmo12g00651 | 457 | ProSiteProfiles | Zinc finger CCHC-type profile. | 314 | 330 | IPR001878 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | PANTHER | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | 395 | 451 | - | - | |
Cmo12g00651 | 457 | SMART | c2hcfinal6 | 314 | 330 | IPR001878 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | SMART | c2hcfinal6 | 345 | 361 | IPR001878 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | SMART | c2hcfinal6 | 404 | 420 | IPR001878 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | SMART | c2hcfinal6 | 287 | 303 | IPR001878 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | SMART | c2hcfinal6 | 435 | 451 | IPR001878 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | PANTHER | ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN | 395 | 451 | - | - | |
Cmo12g00651 | 457 | ProSiteProfiles | Zinc finger CCHC-type profile. | 346 | 361 | IPR001878 | GO:0003676|GO:0008270 | |
Cmo12g00651 | 457 | Coils | Coil | 177 | 197 | - | - | |
Cmo12g00651 | 457 | PANTHER | ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN | 20 | 366 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g00651 | - | - | csv:101211176 | 721.85 |