Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g00652 | ATGTCGATCTCTTCTTTCTCCGATTGCTTCATTGACTCTCACCTACTCTGTGATGAGGAATCCTCCGGTATTTTTCCCGGAGAGTCGCTGGAGTACTTGACGGATTTTGAATCGGCGGATAGTAGTGAGGATTCTATCGCTGGTTTCATAGAGGATGAGCGGCACTTCGTTCCTGGAATTGATTACTTGTCGCGCTTTCGGTCTCAATCGCTGGACTCTTCCGCTAGAGCTGACTCTGTTGCATGGATTCTCAAGGTTCACTCATATTACGGTTTTCAACCACTCACCGCATACCTCTCCGTGAACTACTTGGATCGTTTCCTTTATTCTCGCCCCTTGCCGGAAACAAATGGGTGGAAGATGCAGCTCCTTTCAGTGGCTTGTTTGTCACTTGCAGCAAAAATGGAGGAACCCCTTGTTCCTTCTTTCCTGGATCTCCAGATTGGAGGAGCAAAACATATATTTGAGCCTAGAACAATACGTAGGATGGAGCTTCTTGTGCTGACAACTTTGAATTGGCGGCTGCGATCTGTAACACCCTTGAGCTTTATCGGATTCTTCGCCTACAAAGTTGATCCCAGCGGAACATTTTCCAGTTTTCTCAACTCACGCTCCACAGAAATTATTCTGTCCAATCTTCGAGACGCTAGCTTTCTCGAGTACTGGCCCTCCTGCATCGCTGCCGCAGCCTTACTATGTGCGGCAAATGAAATTCCAAATTTGACCCTGTTGAATCCTGAACACGCGGAGTCTTGGTGCAACGGACTGAGCAAAGAAAAAATTGGTGGGTGTTATCGGCTAATGCAGCAGCCGTTAACATCGAAAGTGATAGTGCCACTCCGAGTTCGAATCCGAGCTGGGTTGAGGTACATTGACTCATCATCCTCATCCTCCCCATCATCAACATTACCTTTTAAAAGAAGAAAATTGAATAATTGCGTGTACCCAGAAGATGACAAAGAAAATTCCAAACTTAGAGCAGAGCAGTAA | 990 | 46.26 | MSISSFSDCFIDSHLLCDEESSGIFPGESLEYLTDFESADSSEDSIAGFIEDERHFVPGIDYLSRFRSQSLDSSARADSVAWILKVHSYYGFQPLTAYLSVNYLDRFLYSRPLPETNGWKMQLLSVACLSLAAKMEEPLVPSFLDLQIGGAKHIFEPRTIRRMELLVLTTLNWRLRSVTPLSFIGFFAYKVDPSGTFSSFLNSRSTEIILSNLRDASFLEYWPSCIAAAALLCAANEIPNLTLLNPEHAESWCNGLSKEKIGGCYRLMQQPLTSKVIVPLRVRIRAGLRYIDSSSSSSPSSTLPFKRRKLNNCVYPEDDKENSKLRAEQ | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 4203093 | 4206213 | - | CmoCh12G006520.1 | Cmo12g00652 | 393340 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g00652 | 329 | Pfam | Cyclin, C-terminal domain | 178 | 272 | IPR004367 | - | |
Cmo12g00652 | 329 | ProSitePatterns | Cyclins signature. | 76 | 107 | IPR006671 | - | |
Cmo12g00652 | 329 | SUPERFAMILY | Cyclin-like | 160 | 273 | IPR036915 | - | |
Cmo12g00652 | 329 | SUPERFAMILY | Cyclin-like | 40 | 175 | IPR036915 | - | |
Cmo12g00652 | 329 | CDD | CYCLIN | 76 | 168 | IPR013763 | - | |
Cmo12g00652 | 329 | Gene3D | - | 59 | 176 | - | - | |
Cmo12g00652 | 329 | Pfam | Cyclin, N-terminal domain | 47 | 175 | IPR006671 | - | |
Cmo12g00652 | 329 | PANTHER | CYCLIN-D1-1 | 25 | 312 | - | - | |
Cmo12g00652 | 329 | Gene3D | - | 50 | 239 | - | - | |
Cmo12g00652 | 329 | SMART | Cyclin_C_2 | 178 | 300 | IPR004367 | - | |
Cmo12g00652 | 329 | PANTHER | CYCLINS | 25 | 312 | IPR039361 | - | |
Cmo12g00652 | 329 | SMART | cyclin_7 | 81 | 169 | IPR013763 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo12g00652 | Cmo-Chr12:4203093 | Cmo16g00330 | Cmo-Chr16:1507017 | 2.50E-58 | dispersed | |
Cmo12g00652 | Cmo-Chr12:4203093 | Cmo05g00921 | Cmo-Chr5:7189219 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g00652 | K18810 | - | csv:101210686 | 545.043 |