Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00675 ATGGCGGGGAAGCCTAGCTCGGTTTCCTTCAGGGTTCCGTACCGGAACCTCCAGGATGCGGAAGTAGAGATGGTGGCTGTCGATGAACAGCAGCTCCAAGGGATTGATCTCAATTCTCCTTCTTCTAGTAGATGTGCCAATGGAAGCCCAGACGGTTCGTCGTCAACGCCTCATGTTAGATCTACGCCAAATAGTTTGATTATCTTAATTCTCAGTTGTACTATCGCTGCCGGTGTTCAATTTGGTTGGGCATTACAGCTCTCCTTACTAACTCCCTATATTCAGACACTTGGAATCGAGCATGCATTTTCTTCATTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGTTCAACCATGTGTTGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGACATTGGGTATATACTAGGAGATACGGAGGAACATTGCAGAGTATATAAAGGTACACGAACAAGGGCAGCTATTATTTTTGTAATAGGCTTTTGGATGCTTGATCTTGCGAACAATACAGTGCAGGGTCCTGCCCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCAGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCTAGTGGAAACTGGCACAAATGGTTTCCTTTCCTTTTGAGTGATGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTATCGCTGTGGTTTTTCTAACCATATGTACTCTTGTTACCATATATTTTGCCCATGAAGTTCCACTTACTGCTGTAGATCAACTACCACGTTTATCAGATTCTGCTCCTCTGTTGAATGGGAATGAACAAAGTAGTCCTAGTACTGTAAAATCGGAACTTAACAGTCCAAATGGGAGCAATGACAACTATGGCTATCAAAAAGATGTGAATTTGGAAATTTCAAAATCAATAATTGAGGAAAATCACAGTGAAAGTTATTACGATGGTCCTGCAACAGTGGTAGTCAAATTGCTAACCAGTTTAAGGCATTTACCACCGGCCATGCATTCAGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTTGATACGGATTGGATGGGAAGGGAAGTGTACCATGGGGACCCAAAAGGAAGTTTGGCTGATGAACAGGTTTATGATCAGGGTGTCAGAGCAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTCATAGAGCCGATGTGTCAGCGCATGGGAGCAAGACTTGTCTGGGCAATAAGCAACTTTATTGTGTTTGCATGCATGACGGGAACTACTATTATCAGTTTAATATCTGTCAGTCAATACTCTGAAGGAATCGAACGCGTTATCGGAGGAAACTCAACAATAAAAAATGCTGCCTTGGCTGTTTTTGTTCTTCTTGGTTTTCCTCTTGCTATAACTTATAGCGTTCCCTTCTCTTTGACAGCAGAATTGACCGCTGATTCTGGTGGTGGCCAAGGATTGGCTATTGGAGTTCTCAATCTTGCAGTTGTTATTCCCCAGATGATTGTATCACTGGGTGCTGGGCCATGGGATGCATTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTGGCTTCTGTTTGTGCGCTTGCGGCTGGAGTTGTTGCGCTTCTTAGATTGCCTGATCACACCAACAGTTCTTTCAAATCCACAGGTTTTCATTTTGGTTGA 1815 43.03 MAGKPSSVSFRVPYRNLQDAEVEMVAVDEQQLQGIDLNSPSSSRCANGSPDGSSSTPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVVLIGFSADIGYILGDTEEHCRVYKGTRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSDACCEACGNLKAAFLIAVVFLTICTLVTIYFAHEVPLTAVDQLPRLSDSAPLLNGNEQSSPSTVKSELNSPNGSNDNYGYQKDVNLEISKSIIEENHSESYYDGPATVVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLADEQVYDQGVRAGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAISNFIVFACMTGTTIISLISVSQYSEGIERVIGGNSTIKNAALAVFVLLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMIVSLGAGPWDALFSGGNIPAFALASVCALAAGVVALLRLPDHTNSSFKSTGFHFG 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4526412 4532580 + CmoCh12G006750.1 Cmo12g00675 393363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00675 604 Pfam Major Facilitator Superfamily 78 393 IPR011701 GO:0022857|GO:0055085
Cmo12g00675 604 PANTHER SUGAR TRANSPORTER 39 604 - -
Cmo12g00675 604 SUPERFAMILY MFS general substrate transporter 54 591 IPR036259 -
Cmo12g00675 604 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 39 604 - -
Cmo12g00675 604 MobiDBLite consensus disorder prediction 36 59 - -
Cmo12g00675 604 MobiDBLite consensus disorder prediction 306 332 - -
Cmo12g00675 604 CDD MFS_SLC45_SUC 69 586 - -
Cmo12g00675 604 Gene3D MFS general substrate transporter like domains 62 587 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00901 Cmo-Chr5:6793450 Cmo12g00675 Cmo-Chr12:4526412 0 dispersed
Cmo12g00183 Cmo-Chr12:1194417 Cmo12g00675 Cmo-Chr12:4526412 6.51E-152 dispersed
Cmo12g00675 Cmo-Chr12:4526412 Cmo01g00506 Cmo-Chr1:2439390 8.20E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00675 K15378 - csv:101205348 1063.14