Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g00913 ATGGTGGGGAATTTCCAGCCCACGGTTCTTGTGTTTTTGGCGATTCTTGTTGTTGGGAAGGCGGAAATTTACATTGTCACCATTGATGGAGAACCTATTGTGAGTTATAAAGGTGATCTTGATGGATTTGAGGCCACTGCAGTGGAATCTGATGAAAAGATCGACTCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTTGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCAGTTGACATCTCGCACGATCAGGCAGAGACTCTAAGACACACGCCAATTGTAAAATCTGTGGAGAGGGACTGGAAGGTTAGGAAACTAACAACACACACACCGGAGTTTTTGGGTCTTCCAACAGGCGTATGGCCAACCGGCGGTGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATATATCCACACCATCCAAGTTTTGCTACCTATAATACCGAACCTTTCGGGCCATGTTCGAAGTATAAAGGGAAATGTGAAGTTGACCCCAACACCAAGAAGAGTTTTTGTAATGGAAAGATTGTTGGAGCTCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTAATCCTTCTATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGCCATACTGCAGCAATTGCAGCTGGAAACAATGGAATCCCTGTGAGACTGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGGATTTTTGGAGGATTTGTTGCTGATGTAGTGGCAGCTATTGATCAGGCTGTACATGATGGGGTCGATATTCTGAGTCTTTCGGTGGGGCCAAATAGTCCTCCTGCAACTACAAAGATCACATATTTAAACCCTTTTGATGCTACCCTTCTTTCCGCTGTAAAAGCTGGTGTCTTTGTTGCGCAAGCTGCTGGAAATGGAGGTCCATTTCCTAAAACATTGGTGTCCTATAGTCCATGGATAACCACTGTGGCTGCTGCCATTGATGACAGAAGATACAAAAACCATCTCACACTTGGTAATGGAAAAATCTTGGCTGGACTTGGGCTATCACCTGCTACACATTTAAACCGAACGTACACATTGGTCGCAGCTAACGACGTTCTGTTAGATTCATCAGTAAGGAAGTCCAGCCCCTCTGACTGCCAAAGACCAGAAGTTCTAAACAAACGACTGGTTGAAGGGAAGGTTCTTCTTTGTGGCTATTCATTCAGTTTTGTTGTGGGTACTGCTTCAATCAAGAAGGTCGCTCAAACTGCAAAAGCCCTTGGTGCTGCTGGCTTTGTTCTTGCTGTTGAAAACGTCTCTCCTGGAGCAAAATTTGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTTTAACTGATGTCACCAAGTCAATGGATCTTATTGACTACTATAACACCTCTACACCCCGAGACTGGACGGGTCGGGTCAAGAGCTTTGACGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTGTACAAATCAGCTCCTGAGGTTGCATTGTTTTCTGCTCGTGGACCAAATATTAGAGACTTTAGCTTTCAGGATGCTGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATATGGGCTGCTTGGTCTCCAAATGGTACAGACGAGCCTAACTATGTTGGAGAGGCATTTGCTATGATTTCTGGAACGAGCATGGCAGCACCGCATATAGCCGGTATAGCAGCTCTTGTAAAACAGAAGCATCCTAACTGGAGTCCTGCAGCCATCAAATCGGCCTTGATGACGACATCAACGACAATGGACAGAGCAGGAAGACCTCTTAAAGCACAACAATTTTCCGAAACAGAAGTCATGAAACTAGTATCTGCAACGCCTTTCGATTACGGGAGTGGTCATGTAAACCCAAGAGCAGCACTGGATCCTGGACTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTTCTGTGCACGACAGCGGGTATCAACGTGCACGAGATACACAACTATACTAACTCACCCTGCAACTTCACCATGGGACATCCATGGAATCTAAACAGCCCATCAATTACCATCGCCCATCTTGTGGGAACTAAGACTGTTACTCGCACAGTAACAAATGTTGCTGAGGAAGAAACCTACACAGTTACTGCAAGAATGGACCCTGCTATTGCCATAGAAACAAATCCTCCAGCAATGACTCTACGATCCGGGTCGTCGAGAAAATTTTCAGTAACTCTCACAGCTCGTTCGCAGACAGGAACATATAGTTTTGGCGAGGTTATATTGAAGGGCAGTAGGGGTCACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA 2451 45.08 MVGNFQPTVLVFLAILVVGKAEIYIVTIDGEPIVSYKGDLDGFEATAVESDEKIDSTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDISHDQAETLRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCSKYKGKCEVDPNTKKSFCNGKIVGAQHFAEAAKAAGAFNPSIHFASPLDGDGHGSHTAAIAAGNNGIPVRLHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVRKSSPSDCQRPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVAQTAKALGAAGFVLAVENVSPGAKFDPVPVGIPGILLTDVTKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEAFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRAGRPLKAQQFSETEVMKLVSATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLVGTKTVTRTVTNVAEEETYTVTARMDPAIAIETNPPAMTLRSGSSRKFSVTLTARSQTGTYSFGEVILKGSRGHKVRIPVVAMGYQR 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8405049 8411660 - CmoCh12G009130.1 Cmo12g00913 393601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g00913 816 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 815 IPR045051 -
Cmo12g00913 816 Gene3D - 368 533 - -
Cmo12g00913 816 Pfam Peptidase inhibitor I9 24 126 IPR010259 -
Cmo12g00913 816 SUPERFAMILY Subtilisin-like 128 677 IPR036852 GO:0004252|GO:0006508
Cmo12g00913 816 Pfam Subtilase family 153 634 IPR000209 GO:0006508|GO:0008236
Cmo12g00913 816 SUPERFAMILY Protease propeptides/inhibitors 85 126 - -
Cmo12g00913 816 Pfam Fibronectin type-III domain 718 810 IPR041469 -
Cmo12g00913 816 Gene3D - 690 813 - -
Cmo12g00913 816 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Cmo12g00913 816 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Cmo12g00913 816 PRINTS Subtilisin serine protease family (S8) signature 595 611 IPR015500 -
Cmo12g00913 816 CDD PA_subtilisin_like 375 513 - -
Cmo12g00913 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 596 606 IPR023828 -
Cmo12g00913 816 PANTHER CUCUMISIN-RELATED 14 815 - -
Cmo12g00913 816 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Cmo12g00913 816 Gene3D Peptidase S8/S53 domain 155 686 IPR036852 GO:0004252|GO:0006508
Cmo12g00913 816 CDD Peptidases_S8_3 129 632 IPR034197 -
Cmo12g00913 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Cmo12g00913 816 ProSiteProfiles Serine proteases, subtilase domain profile. 122 673 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo05g00748 Cmo12g00913 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01474 Cmo-Chr3:10565873 Cmo12g00913 Cmo-Chr12:8405049 0 dispersed
Cmo07g00039 Cmo-Chr7:270776 Cmo12g00913 Cmo-Chr12:8405049 0 dispersed
Cmo12g00913 Cmo-Chr12:8405049 Cmo10g00800 Cmo-Chr10:3726208 9.04E-112 dispersed
Cmo16g00602 Cmo-Chr16:2939824 Cmo12g00913 Cmo-Chr12:8405049 9.37E-07 dispersed
Cmo18g00546 Cmo-Chr18:4233676 Cmo12g00913 Cmo-Chr12:8405049 3.88E-135 transposed
Cmo12g00913 Cmo-Chr12:8405049 Cmo05g00748 Cmo-Chr5:3956217 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g00913 - - csv:101219351 1558.89