Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g01043 ATGGGAGCTTTGAGTGAGGGTCTAATACAGGTGTTGATACCTGCAGCTGCCTTGCTTGGTATTGGATTTGCCTTTCTTCAATGGGTTTTGGTATCAGGGGTTAAGGTTTCTGGGTATGCTGATGATGAAAGCCAGGAGAACAATTTGATTGAATCTGGACATGAGGAAGGAGCAACCTCATTTTTATTCACCCAGTACAAGTACCTTGTTGTGTTCATGGGAGCATTTGGAGCCGTCATTTTTCTGTTCCTTGGCTCAGTCAAGAGCTTCAGCACCAAAAGTGAACCTTGCACGTACAACAAGGGACAGATGTGTAAACCAGCTCTAGCCAATGCCATCTTCAGCACAATTGCCTTCTTCCTAGGTGCTCTCACCTCGGTTCTATCCGGTTTCCTTGGAATGAAGATAGCAACTTATGCAAACGCTCGAACGAGCCTAGAAGCACGAAAAGGCATCGGAAAAGCATTCACTATCGCCTTTCGTTCGGGTGCTGTCATGGGATTCCTTCTAGCTGCCAATGGCCTCCTTGTGTTATATGCCTCCATCAATTTGTTTAAGCTGTATTATGGCGATGATTGGGAAGGATTGTACGAGTCTATCACCGGGTACGGTCTTGGAGGTTCTTCAATGGCGTTGTTTGGACGTGTTGGGGGTGGCATATACACAAAAGCAGCTGATGTTGGAGCTGATCTTGTCGGGAAAATCGAAAAGAATATCCCGGAAGACGATCCACGAAATCCTGCTAATCAACCTGTGCTGCACTTTTCGTGGCGTCGATATCGTCGTTCGGCTTCACACATAACTATGCAGCCATGTCCTACCCTCTACTTATAA 834 46.4 MGALSEGLIQVLIPAAALLGIGFAFLQWVLVSGVKVSGYADDESQENNLIESGHEEGATSFLFTQYKYLVVFMGAFGAVIFLFLGSVKSFSTKSEPCTYNKGQMCKPALANAIFSTIAFFLGALTSVLSGFLGMKIATYANARTSLEARKGIGKAFTIAFRSGAVMGFLLAANGLLVLYASINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIEKNIPEDDPRNPANQPVLHFSWRRYRRSASHITMQPCPTLYL 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9690983 9694861 + CmoCh12G010430.1 Cmo12g01043 393731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g01043 277 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 50 248 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo12g01043 277 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 50 248 - -
Cmo12g01043 277 Pfam Inorganic H+ pyrophosphatase 41 248 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo12g01043 277 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 4 47 - -
Cmo12g01043 277 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 47 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g01043 Cmo-Chr12:9690983 Cmo17g00604 Cmo-Chr17:6402349 9.84E-32 dispersed
Cmo12g01043 Cmo-Chr12:9690983 Cmo11g00507 Cmo-Chr11:2436611 5.05E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g01043 K23025 - csv:101205277 444.506