Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g01110 | ATGTTGAGATTCCATGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGGAAGAAACACTGGACATGGCGGTTGGATCTGTGGCCATTCGCCATTCTTTATGTGGCCTGGCTTGCTGTTGTTGTTCCTAGTATTGACTTTGGGGATGCTCTCATTGTTTTGGGTGGACTTGTGGCTCTTCATGTTCTGGTCTTGCTTTTCACTGGTTGGTCGGTTGATTTCAAATGTTTTGTCCAGTACAGCAAGGTGTTCTTCTACAATCATTATTCTTTTTCTATAAATTTCGTACTTGCATTTGATGATTCTTATGAATTGCCATTACATTTGAGACGTTGGCTTATCATATGGTTTTCTGCAGTTAATAATATTTATCATGCTGATACATGCAAGATAGTTCCAGCAAAATTTTCGGGCTCAAAAGAAATTGTTTCGCTTCATTTTCGTAAGCTTCTGGCTGGTTCTGAATCTGCAATGGATATTGAGGAGATCTACTTTGATTTCAGAAAACAAAGATTCATTTATTCAAAGGAAAAGGAGACTTTCTGCAAGCTTCCTTACCCAACAAAAGAAACTTTTGGTTATTATCTAAAGAGTACTGGCTATGGCTCCGAGCCTAAAGTTGTAGCCGCCGTTGATAAATGGGGACGCAATATCCTGTTTACACTTTTTATGCTTTTCATGTTTGAATCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGACGTGTCAGAGTGGATACTCAGACCTTAATGGTGCATCGGTGTGGAAAGTGGGTGAAGCTACCTGGAACTGAGCTTTTGCCTGGCGATGTTGTCTCCATTGGGCGTAATTCTGGTCAGAGTGGTGAAGATAAATCTGTACCTGCTGATATGCTTATATTGGCTGGAAGTGCTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACACCACAATGGAAGGTTTCAGTATCTGGGAGAGGAATTGAGGAGAAGTTATCGGCTAAGAGAGACAAGAGTCACATGTTATTTGGTGGAACCAAAATATTGCAGCATACGCCAGATAAGACCTTTCCCCTTAGGACCCCTGATGGTGGCTGCCTAGCAGTTGTTTTGAGAACTGGATTTGAAACAAGTCAAGGGAAACTAATGCGGACAATTTTGTTTTCTACAGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCTTATTTATTTTGTTCTTGGTTGTATTTGCGGTTATAGCTGCTGGTTACGTTCTTGTAAAGGGGTTGGAAGATCCCACGAGAAGCAAGTACAAACTTTTCCTTAGTTGCTCACTTATAATCACTTCTGTTATTCCTCCTGAACTACCGATGGAACTGTCAATAGCCGTTAATACATCATTAATTGCTCTGGCACGTTGTGGAATATTTTGTACAGAGCCTTTCAGAATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTTGATAAAACTGGAACGTTGACATCAGATGACATGGAGTTTCAAGGTGTAGTTGGATTGAATGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGCCTTTGCGCACAGTTGAAATTCTGGCTTCTTGCCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCGCTGAAGGGAGTTGACTGGACTTACAAATCTGATGAGAAAGCCATTCCAAGAAAGGGAAGTGGCCACGCTGTTCAGATTGTTCAGAGGCACCACTTTGCTTCACATTTGAAGAGAATGGCAGTTGTTGTGCGCCTTCAAGAGGAATTTTTTGCATTTGTGAAGGGTGCTCCTGAAACAATACAAGAGAGGCTCACTGATATACCTTCATTTTATGTTGAGACGTACAAGAAATATACACGACAAGGTTCCCGTGTTCTTGCTCTTGCTTACAAATCACTTCCAGACATGATGGTTAGTGAAGCTAGAGGCCTGGATAGGGACTTGGTGGAGAGTGACCTTATATTTGCTGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCGGATTCGGCTACAGTCTTATCTGAGCTTAAAGGATCATCCCATGACTTGGTAATGATTACTGGCGACCAAGCTTTAACAGCATGCCACGTAGCTAGCCAAGTTCATATTACCTCAAAGCAGATTTTAATTCTCAATTCAAAGAAGGGAACTGAGGAATATGAATGGCTCTCCCCAGATGAGTTACAGACAGTTCCCTACAGTGAGAAAGAGGTGGGGAATTTATCGGAGACATACGATCTGTGTATTGGCGGTGACTGCATCGGAATGCTACAAAGCACCTCCACTGTGCTCGATGTTATTCCATACGTTAAGGTTTTCGCTCGAGTTGCTCCAGAGCAGAAAGAACTCATATTGACCACTTTCAAAACAGTTGGAAGAATGACGTTGATGTGCGGGGATGGAACAAATGATGTTGGAGCTTTGAAGCAGGCTCATGTAGGAATTGCTCTTCTAAACGCAGTCCCCCCTCCTAAAACTGGCAACTCTCCTTCAGAAGCATCAAAAGATGACTCGGGACGGTCTGCAAAGTCGAAGAAATCTAAGCCTTCATCCGAATCATCAGGAAAAGCACTTACAAGTGGAGAAGGTTCTTCAAAAAGCAAAGTTAGTTCGAAACTGGATTCCGTTGCTGAGCAAGCGAGTAATCGTTCAAGGACGCCAGCAGAGATGCAAAGACAAAAGCTAAAGAAACTGATGGATGAGTTAAACGAAGAGGGTGATGGGCGCTCTGCCCCTATCGTCAAGCTTGGGGATGCATCCATGGCATCGCCATTCACAGCAAAGCATGCTTCTGTTGCCCCGACTACCGACATTATTCGCCAAGGTCGAAGTACTCTAGTGACAACTCTCCAGATGTTTAAAATACTCGGTCTCAACTGCCTTGCTACAGCCTATGTATTGAGTGTTATGTATTTGGATGGTGTAAAGCTTGGCGACATTCAAGCGACAATCAGTGGAGTATTCACAGCAGCCTTTTTCCTCTTCATCTCACATGCACGCCCCCTTCCAACACTTTCAGCTGAACGGCCACATCCACATATCTTCTGCTCTTATGTTCTCCTTTCCCTGCTAGGCCAATTTGCAATCCACCTCTTTTTCTTGATTTCTTCAGTTAACGAAGCCGAAAAGCACATGCCCGACGAATGCATCGAGCCAGACTCAGATTTTCATCCCAACTTGGTTAACACTGTTTCGTACATGGTAAGCATGATGCTTCAGGTAGCCACCTTTGCAGTAAACTACATGGGTCATCCTTTCAACCAGAGTGTATCCGAAAACAAACCATTCTTATACGCCCTCTTGGCTGCGGTTGGTTTCTTCACCGTCATTACCTCGGATTTGTTCCGAGACCTGAATGACTGGCTGAAACTCGTTCCATTGCCTGCGGGATTGAGGGACAAGCTTCTGTTATGGGCACTTCTTATGTTCGTGTGCTGTTACTCTTGGGAAAGACTGTTGAGATGGATGTTCCCTGGAAAAATCCCGGCATGGCGTAAGCGACAACGAGTGGTAGCGGCGAATCTGGAGAAGAAGAAACAGATCATGAAGCAAGATTCAAATATGGAGGCAGAGTCAACTCTGCCTGAATGCGAAGAGAAGGACGTAGGTAGTTCTGATGTACAGACGGACGAGGGAAATGTAGAAAATTTATCAACAGAACATGAAGGTAAGAGAAAAGAAGCTCCTACAGAACAAGTAGATGACATGAAAGAAGATGCGACTGAAGTCGGTAACACGTCTGAAGCTGGAAAGTCTAATGAAAAATGCATTGCAAAAGGGTCGCGTAAAACGAAAACTGTAAAAGTTTTGAAGGTAAAGCGAAAAATTGTAAAGAAATCCCCTGCTAGCAATGCATTGAGGACCAGAAAGGCACAGGTTGAACAGGAAGATAACAAAAAGGAAAAAGAGGTTCATGTAGCCCAAGAAGTGGGAGAAACTCCTGAAGCTCGGAATTCCAAAAAGGACGATGAGGTTTCTGTCGACCAAGAAGCGGGAGAAACTCTCGAAGCTCCGATTTCCAACAAGGAAGAAGAGGTTTCTGTAGACCAAGCAGTGGGAGAAACTCTTGAAGCTCAGAATTCCAATAAGGACAAAGAGGTTTCTGTTGCCCAAGAAGTGGGAGAAACTCTTGAAGCTCAGAATCCCACTGAAAATTCCAGCAAACCAGAGTCAAAGACGAAGAAGATTACTAAAGCTTTGAAGGTGAAAAGAAAAATCGTAAAGAAATCTCGAGCGAGCAGCCAAATGAAGACTAATAAAAATGGGAAAGGTAATGAAAAGAACGTAGAAGATACCGTGAAGCCTGACGAAAAGGAAAATGCTAATGAAAGTATCTCAAAAGCGGAGCATATCGAGAAGGGTGAAGAGACATCTGCTAGCGATAGAAACAATTCCGAGTTCAAAAGTAGCATCAAGGAACAGAACAATATTGAGAAGGTTGGCTCTTCAGATAAGAGATTAAAGAATCACAAAAGGAAAGAAAAGGATAGAGCTCAAACGAGTCGAATAGAAGATAAGAACGAAGAAAATCTCGGCGGATTGATTTTCATGTGCAGTGCGAAAACGAAGCCAGATTGTTTTCACTACAACGTAATGGGCGTTTCTGCTGGCAGAAAGGATACCGTCTTAGCAATCAAACCCGGGCTAAACCTATTCCTTTATGATTTTGATCTCAGGCTTCTGTATGGGATTTACAAGGCATCTTCTTCCGGTGGCATGAAACTCGAGCCGAAGGCTTTCAATGGAGCTTTCCCTGCTCAGGTACGATTCAATGTTTACAAGGATTGTTTTCCACTACCTGAGAGCATTTTCAAGAATGCCATCCAAGAGAATTATTTTGAGAAGCACAAGTTCAAAGTTGAACTCTCTGTTAAACAGGTTCGGAAGCTCTCAGCTCTTTTCCGTCCAGTAGGACTCCTCTCGAGTTCGGTTACTATTGGGTTCCTTCCAAAGGTGCCAATTAGGGATAGGAAAGTTCGTAGGAAAGTCGAAGACACTTGGGTTAGGAATTCTAAGTCCAAGGGTGATGCCAGGAATGATCAATCGTCATCTCATGGACGGGACCGACACCGAGAGGAGGCACCTAGACATAGAGAGGAAGTTCCTCGCGAATTGTACGTAAGCGAAAAGGACTATCGAACTTATGGTCTTCAGGTAGAAAGAAGAAATTTAGATCCTGTGCCTTTGCCACGGCCTTATTTAGAAACATACCACAGAGATCATGATAGGGACTATCAACTAAGACATCTAGAGCAGCCACAGAGAGAAGTGGTTCGATCGGATCACGTACACTTTAACGGAAAAGATTATCCAGTTTACAGTATTGATTCTAGATCTCAAATATCACGGGCAATATCTGGTAGCGGTTCGGAACGACCTGCCTATGATCCAATTTACACTCATCAATATGGCCTTTCATCGATCGTCCCGTATCTGGTTCCATCAAGGAGAGATGAAGCTGCTGCTCCAACGTATTCAAGAAGTTACGTCGCTGATACTGAGCCCATGCGTCATGCTGCTCATGCTCTACCGTATTACAATCAGGTTCGGGTTGAGTTTCACTTGCAGACGTCTCGAGTTCCATATGTAGCACAGGGACTTTAA | 5628 | 43.35 | MLRFHVGGKVVERVDLLRKKHWTWRLDLWPFAILYVAWLAVVVPSIDFGDALIVLGGLVALHVLVLLFTGWSVDFKCFVQYSKVFFYNHYSFSINFVLAFDDSYELPLHLRRWLIIWFSAVNNIYHADTCKIVPAKFSGSKEIVSLHFRKLLAGSESAMDIEEIYFDFRKQRFIYSKEKETFCKLPYPTKETFGYYLKSTGYGSEPKVVAAVDKWGRNILFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSIGRNSGQSGEDKSVPADMLILAGSAIVNEAILTGESTPQWKVSVSGRGIEEKLSAKRDKSHMLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARCGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFQGVVGLNDKEDLETDMTSVPLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWTYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFFAFVKGAPETIQERLTDIPSFYVETYKKYTRQGSRVLALAYKSLPDMMVSEARGLDRDLVESDLIFAGFAVFNCPIRADSATVLSELKGSSHDLVMITGDQALTACHVASQVHITSKQILILNSKKGTEEYEWLSPDELQTVPYSEKEVGNLSETYDLCIGGDCIGMLQSTSTVLDVIPYVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPPKTGNSPSEASKDDSGRSAKSKKSKPSSESSGKALTSGEGSSKSKVSSKLDSVAEQASNRSRTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPHIFCSYVLLSLLGQFAIHLFFLISSVNEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPAGLRDKLLLWALLMFVCCYSWERLLRWMFPGKIPAWRKRQRVVAANLEKKKQIMKQDSNMEAESTLPECEEKDVGSSDVQTDEGNVENLSTEHEGKRKEAPTEQVDDMKEDATEVGNTSEAGKSNEKCIAKGSRKTKTVKVLKVKRKIVKKSPASNALRTRKAQVEQEDNKKEKEVHVAQEVGETPEARNSKKDDEVSVDQEAGETLEAPISNKEEEVSVDQAVGETLEAQNSNKDKEVSVAQEVGETLEAQNPTENSSKPESKTKKITKALKVKRKIVKKSRASSQMKTNKNGKGNEKNVEDTVKPDEKENANESISKAEHIEKGEETSASDRNNSEFKSSIKEQNNIEKVGSSDKRLKNHKRKEKDRAQTSRIEDKNEENLGGLIFMCSAKTKPDCFHYNVMGVSAGRKDTVLAIKPGLNLFLYDFDLRLLYGIYKASSSGGMKLEPKAFNGAFPAQVRFNVYKDCFPLPESIFKNAIQENYFEKHKFKVELSVKQVRKLSALFRPVGLLSSSVTIGFLPKVPIRDRKVRRKVEDTWVRNSKSKGDARNDQSSSHGRDRHREEAPRHREEVPRELYVSEKDYRTYGLQVERRNLDPVPLPRPYLETYHRDHDRDYQLRHLEQPQREVVRSDHVHFNGKDYPVYSIDSRSQISRAISGSGSERPAYDPIYTHQYGLSSIVPYLVPSRRDEAAAPTYSRSYVADTEPMRHAAHALPYYNQVRVEFHLQTSRVPYVAQGL | 1875 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 10123236 | 10143546 | - | CmoCh12G011100.1 | Cmo12g01110 | 393798 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g01110 | 1875 | TIGRFAM | P-ATPase-V: P-type ATPase of unknown pump specificity (type V) | 220 | 1146 | IPR006544 | GO:0006812|GO:0016021|GO:0019829|GO:0140358 | |
Cmo12g01110 | 1875 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 240 | 1166 | IPR023298 | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 1405 | 1419 | - | - | |
Cmo12g01110 | 1875 | PANTHER | CATION-TRANSPORTING ATPASE-RELATED | 220 | 1183 | - | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 844 | 858 | - | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 1431 | 1476 | - | - | |
Cmo12g01110 | 1875 | SUPERFAMILY | HAD-like | 480 | 831 | IPR036412 | - | |
Cmo12g01110 | 1875 | Pfam | Development and cell death domain | 1520 | 1642 | IPR013989 | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 1486 | 1512 | - | - | |
Cmo12g01110 | 1875 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 487 | 493 | IPR018303 | - | |
Cmo12g01110 | 1875 | Pfam | haloacid dehalogenase-like hydrolase | 482 | 710 | - | - | |
Cmo12g01110 | 1875 | PANTHER | CATION-TRANSPORTING ATPASE-RELATED | 116 | 219 | - | - | |
Cmo12g01110 | 1875 | PANTHER | CATION-TRANSPORTING ATPASE-RELATED | 1 | 84 | - | - | |
Cmo12g01110 | 1875 | Pfam | E1-E2 ATPase | 253 | 464 | - | - | |
Cmo12g01110 | 1875 | PANTHER | CATION-TRANSPORTING ATPASE | 116 | 219 | - | - | |
Cmo12g01110 | 1875 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 400 | 512 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo12g01110 | 1875 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 771 | 825 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo12g01110 | 1875 | Coils | Coil | 893 | 913 | - | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 1298 | 1336 | - | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 827 | 901 | - | - | |
Cmo12g01110 | 1875 | PRINTS | P-type cation-transporting ATPase superfamily signature | 687 | 697 | - | - | |
Cmo12g01110 | 1875 | PRINTS | P-type cation-transporting ATPase superfamily signature | 305 | 319 | - | - | |
Cmo12g01110 | 1875 | PRINTS | P-type cation-transporting ATPase superfamily signature | 485 | 499 | - | - | |
Cmo12g01110 | 1875 | PRINTS | P-type cation-transporting ATPase superfamily signature | 806 | 825 | - | - | |
Cmo12g01110 | 1875 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 491 | 675 | IPR023299 | GO:0000166 | |
Cmo12g01110 | 1875 | ProSitePatterns | Hypothetical cof family signature 2. | 806 | 828 | - | - | |
Cmo12g01110 | 1875 | SUPERFAMILY | Calcium ATPase, transduction domain A | 253 | 384 | IPR008250 | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 1223 | 1252 | - | - | |
Cmo12g01110 | 1875 | Gene3D | - | 225 | 385 | - | - | |
Cmo12g01110 | 1875 | PANTHER | CATION-TRANSPORTING ATPASE | 220 | 1183 | - | - | |
Cmo12g01110 | 1875 | PANTHER | CATION-TRANSPORTING ATPASE | 1 | 84 | - | - | |
Cmo12g01110 | 1875 | SFLD | p-type atpase | 466 | 952 | IPR044492 | - | |
Cmo12g01110 | 1875 | ProSiteProfiles | DCD domain profile. | 1517 | 1644 | IPR013989 | - | |
Cmo12g01110 | 1875 | SMART | dcd | 1517 | 1644 | IPR013989 | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 1361 | 1375 | - | - | |
Cmo12g01110 | 1875 | Gene3D | - | 483 | 665 | IPR023299 | GO:0000166 | |
Cmo12g01110 | 1875 | SFLD | Haloacid Dehalogenase | 466 | 952 | - | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 1286 | 1512 | - | - | |
Cmo12g01110 | 1875 | CDD | P-type_ATPase_cation | 220 | 1104 | - | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 1673 | 1712 | - | - | |
Cmo12g01110 | 1875 | Gene3D | - | 666 | 831 | IPR023214 | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 1190 | 1262 | - | - | |
Cmo12g01110 | 1875 | MobiDBLite | consensus disorder prediction | 859 | 896 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g01189 | Cmo12g01110 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g01711 | Cmo-Chr6:11777724 | Cmo12g01110 | Cmo-Chr12:10123236 | 1.62E-25 | dispersed | |
Cmo12g01110 | Cmo-Chr12:10123236 | Cmo01g01844 | Cmo-Chr1:13443728 | 4.70E-17 | dispersed | |
Cmo16g00586 | Cmo-Chr16:2836960 | Cmo12g01110 | Cmo-Chr12:10123236 | 2.07E-18 | dispersed | |
Cmo05g01191 | Cmo-Chr5:9333496 | Cmo12g01110 | Cmo-Chr12:10123236 | 0 | transposed | |
Cmo12g01110 | Cmo-Chr12:10123236 | Cmo05g01189 | Cmo-Chr5:9321986 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g01110 | K14950 | - | csv:101215828 | 2080.83 |