Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g01126 | ATGGATGGTTTCTCAGATCTTGAGCCCGATTGCTCTGAATTCGTTGAAATTGATCCCACTGGCCGATATGGCAGATATAATGAAATTTTAGGAAAAGGGGCTTCAAAAACAGTTTACAGAGCTTTTGATGAGTATAATGGAATTGAAGTAGCTTGGAATCAAGTGAAACTCTATGATTTCTTGCAGAGTCCTGAAGATCTGGAACGACTTTACTGTGAGATTCATCTCTTGAAGACATTGAAACATAGAAATATCATGAAATTCTACACTTCTTGGGTTGATATTGCTAATAGAAACATCAATTTTGTTACTGAAATGTTCACTTCTGGTACTCTTAGACAGTATAGATTGAAGCATAAACGAGTTAATATTAGAGCTGTGAAGCATTGGTGTAGGCAGATTCTGAAGGGGCTTCATTATTTGCATAGCCATGAGCCTCCTATTATCCATAGAGATCTCAAGTGTGATAATATCTTTGTTAATGGTAATCAAGGGGAGGTTAAGATTGGTGATCTTGGACTTGCTGCTATTCTTAGGAAATCTCATGCTGATCATTGTGTAGGAACACCAGAGTTTATGGCTCCAGAAGTGTATGCAGAAGCATATAACGAATTAGTCGATATTTACTCATTCGGGATGTGCGTTCTCGAGATGATAACGTTTGAATATCCATACAGCGAATGCACTCATCCTGCTCAGATCTACAAGAAAGTCGTATCCGGGAAAAAACCAGATGCCTTGTACAAAGTGAAGGATCCCGAAGTGCGACAGTTCATCGATAAGTGTTTAGCATCGGTTTCATTTCGACTCTCGGCAGCAGAGCTTTTGAATGATCCTTTTCTTCAAGTTGATAATGGCGAATATGATCTTAGACCTGTCGATTACGGGAGAGGATTCGACGATGTATGCCCTCTTATAAGACGTGACAGCTCCTTTTGTAACGGATATCCATATGATTATAGTTTCGAAGCTTCGAGTGAATCGGGTTACCATCCGATTGATCACGAAACCAATGGAATCGAGCTTTTCGAGTATTATGAAGGTGAACATTCTGAAGATGTTGATATTAGCATTAAAGGGAAGATGAGAGAAGATGGTAGCATCTTCTTAAGACTCAGAATTACTGATAAAGAAGGACTTATTAGGAACATTTACTTTCCGTTCGATGTCGAGACGGATACAGCATTAAGCGTTGCAACAGAAATGGTAGCGGAGCTAGATATTACAGATCAAGACGTGACGAGAATTGCTGATATGATCGACGGAGAAATCGCTTCCTTGGTACCCGAATGGAGACCAGGTCCGGGAATTGAGGAAACGCCTCGTTTTGCTTGTCATAATTGTGCTACTACTTCTTACAACAATGCTTCATCAAATGGTCTTTCATTGAGGAATCCTGGCGGAAAAAACTCGGACGTAGCTCAATGTTGTGGACATCGATATGCTTCGATACACGGTCGTTTCGAGGAGATAATGTATCAAGCTGACGAATCCGAGCATCATCCAGTAGAGGGTGCACCGAATATATCAAGCTTGAATTATCCTGAAATATGGGGTCGTCACGAAAGCCGTGAACTTAGCTCAATGAGCTCACGACATAGCCACTCGGATGAAGATTACGAGAAAACAGATCGACCAAGTACAGTCACGGATACTAAAGAAACGATTGTGGAAAGTAAAACCGTTCCTAAGACGGGAACGTCGCTTAGGGACCTGATGAATTCCCTTTCTTTCTCGGAAACGCCTTCGTTATATGAACCTCGAGATATTGACGAAAATGATGCCCAGCAAGAACTGAGATGGATTAAGGCAAAGTACCAAATGGAATTAAACAAGCTCAAAGAACAAAAAATGGAGAATGGGACACTGGTAGGCCACGACCAAACCCTCGACAGGTCCGATCGAGATACGAACCGAAATAGTACCGAGAGCCGTGTTTATATCAGTAATAGCTGTTACGGTTCAGACGCTCGGAAGGTCGTGGAATCGCCTGTCGTGGAGAAGGTTGTCACGGCTAAAAATGCCTGTAATGGTTCATTGCTTCCAAGTTCTCTTCATAGAGCAATATCTCTACCAGTTGATGCTGTTCATATGTAA | 2097 | 41.54 | MDGFSDLEPDCSEFVEIDPTGRYGRYNEILGKGASKTVYRAFDEYNGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILKGLHYLHSHEPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHCVGTPEFMAPEVYAEAYNELVDIYSFGMCVLEMITFEYPYSECTHPAQIYKKVVSGKKPDALYKVKDPEVRQFIDKCLASVSFRLSAAELLNDPFLQVDNGEYDLRPVDYGRGFDDVCPLIRRDSSFCNGYPYDYSFEASSESGYHPIDHETNGIELFEYYEGEHSEDVDISIKGKMREDGSIFLRLRITDKEGLIRNIYFPFDVETDTALSVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIEETPRFACHNCATTSYNNASSNGLSLRNPGGKNSDVAQCCGHRYASIHGRFEEIMYQADESEHHPVEGAPNISSLNYPEIWGRHESRELSSMSSRHSHSDEDYEKTDRPSTVTDTKETIVESKTVPKTGTSLRDLMNSLSFSETPSLYEPRDIDENDAQQELRWIKAKYQMELNKLKEQKMENGTLVGHDQTLDRSDRDTNRNSTESRVYISNSCYGSDARKVVESPVVEKVVTAKNACNGSLLPSSLHRAISLPVDAVHM | 698 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 10272669 | 10276890 | - | CmoCh12G011260.1 | Cmo12g01126 | 393814 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g01126 | 698 | MobiDBLite | consensus disorder prediction | 525 | 554 | - | - | |
Cmo12g01126 | 698 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 1 | 669 | - | - | |
Cmo12g01126 | 698 | CDD | STKc_WNK | 22 | 281 | - | - | |
Cmo12g01126 | 698 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 148 | 160 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo12g01126 | 698 | Pfam | Protein kinase domain | 27 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo12g01126 | 698 | Coils | Coil | 596 | 616 | - | - | |
Cmo12g01126 | 698 | SMART | serkin_6 | 24 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo12g01126 | 698 | Gene3D | Transferase(Phosphotransferase) domain 1 | 107 | 287 | - | - | |
Cmo12g01126 | 698 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 105 | - | - | |
Cmo12g01126 | 698 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK1 | 1 | 669 | - | - | |
Cmo12g01126 | 698 | ProSiteProfiles | Protein kinase domain profile. | 24 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo12g01126 | 698 | MobiDBLite | consensus disorder prediction | 525 | 551 | - | - | |
Cmo12g01126 | 698 | SUPERFAMILY | Protein kinase-like (PK-like) | 27 | 282 | IPR011009 | - | |
Cmo12g01126 | 698 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 369 | 423 | IPR024678 | GO:0004674|GO:0005524 | |
Cmo12g01126 | 698 | Gene3D | - | 366 | 431 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g01209 | Cmo12g01126 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g01121 | Cmo-Chr8:7145129 | Cmo12g01126 | Cmo-Chr12:10272669 | 0 | dispersed | |
Cmo12g01126 | Cmo-Chr12:10272669 | Cmo17g00224 | Cmo-Chr17:1320289 | 0 | dispersed | |
Cmo11g01026 | Cmo-Chr11:5621327 | Cmo12g01126 | Cmo-Chr12:10272669 | 0 | transposed | |
Cmo12g01126 | Cmo-Chr12:10272669 | Cmo05g01209 | Cmo-Chr5:9473841 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74741 | PF00069 | Pkinase | 1.10E-49 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g01126 | K08867 | - | csv:101219552 | 1192.56 |