Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g01137 | ATGGCGTTGAGGTGCAGGAAAAGTGATGAGGTAGTTGAAGTTCTTAATCGTGAAGAACGTCTGGTTATGGCTAAAACTCACAAACGGAGGTGGAAGATGGCCTTTGCCGCCATTTATTTCACTAGAGCTCTCATCTCTCTGACGAGGAAGGTCACTGGCAATAAATCCGGCGCTCTTTTGCGGTCGCTTTCGTTTGTTACTCTTGATGTGCAGGTTAATGATGATAGTACGGATTCTGGCGAGCAGCCGTGCATGGCAGGCTTTTTCGGCGTTGATCAGAAAGTTCTTAGTGAGATGGTGAGGGAGAAGGACTGTGAGTGTTTGAATCGATTTGGAGGCGTTGATGGACTGGCCAATCTTCTTAAAACTAATCCACATGACGGAATTTGTGCAACTGAGGATGATCTTAATTACAGAACAAACGCTTTTGGAACAAATACTTACTCGAAGCGCCACGGCAAAAGCTTCTTTAGGTTCGTGATTGAAGCGTTTAACGATACAACAATAATCATTCTATTGATTTGTGCAGTGCTTTCTTTGGGATTTGGTATCAAACAACACGGTTGGGATGATGGATGGTACGACGGTGGCAGCATTGTCATCGCCATAGTTCTGGTGGTCGTCGTTTCCGCCGCGAGCAACTTCAAGCAATCGCGACAGTTCGAGAAGCTTTCAAACGAGAGAGACGATATAAAAATCGAGGTCACCAGAGCCGGTCGACGCAAATCAGTATCGATATTCGAACTCCTTGTCGGAGACATCGTGTATTTGAAGATCGGAGATCAGATTCCCGCGGACGGAGTGTTCCTCGATGGACATTCGCTGAAGATCGACGAATCGAGCATGACTGGAGAGAGCGAACACGCTGAAGTAAATCACGAAATTAATCCGTTTCTGCTATCAGGAACCAAAGTGAACGATGGATTTGGTGTGATGATGGTGACTTCTGTGGGAATGAACACAGCCTGGGGAGAAATGATGAGTTCAATTAGAAGGGAAATTAATGAGGAAACTCCACTGCAAGCTCGTCTGAACAAGATGACCGCCATTATCGGGAAGCTAGGACTGACGGTCGCAGTGGTGGTGCTTCTTGTTCTTCTGGCTCGCTATTTCACTGGTAGCACCGGCGAGTTCAATGGAAGCAAGACGAGGTTCGATGATGTTATGAATGCAGTTCTTGGCATGGTTGCGGCGGCTGTTACAATCGTTGTGGTGGCGATTCCGGAAGGTTTGCCTCTAGCTGTTACTTTAACTTTAGCTTACTCCATGAAAAAGATGATGGCGGATAATGCAATGGTTCGGAAACTCTCTGCTTGTGAGACCATGGGCTCAGCAACCACAATTTGTACTGATAAAACTGGTACCCTTACTTTGAATCAGATGAAAGTTACAGAGTTTTGGATTGGGGAAGATAAAATTATGAACACAGATTATTCCAATTCAAGGATTAGCAGTAAGGTTGTTGAATTACTGCACCAAGCAGTTGGATTGAACACAACTGGTAGTATTCAAACACCAGCTTCTTCATTGCCTCTAGAAATCTTCGGGAGTCCGACCGAGAAAGCGATACTTTCGTGGGCGGTATTCGACCTGGATTTGAACTTGGATGAACTGAAGAAACAACATGAGATGATCCTGGTAGAGACTTTCAGTTCAGAGAAGAAGAGAAGCGGAGTTTTGACACGACGACACGGGACAAGGCTTGTTAATACACACTGGAAAGGAGCAGCAGAGATGATATTGGCTATGTGTTCATATTACTATGAGAAACAAGGAACAGCTAGAGCCATTGATGGTGAAATGAGAAGACAATTGACTGAAATAATCACAGCCATGGCAGAAAAAAGTCTCCGATGCATAGCCTTTGCTCACAAGTCGAATGAAGACGACGATATCCAAGACATTCCTGTGAAACTCGACGAATCGGAGTTGACATTACTGGGAATAGTTGGTTTGAAAGATCCTTGCAGGCCAGGAGTTAGAGAAGCTGTGGAATCATGTAGAGCTGCTGGAGTGAGTATCAAAATGGTGACAGGTGATAATCTGCACACAGCAACAGCCATAGCAATTGAATGTGGAATACTAAATCCCGACGACGACGCTACTAACAGCGAAGTAATTGTCGAGGGCGTAAAATTTAGAAACTACACACCTGAGGAGAGGCTCGAAAAGATTGGGACCATCCGAGTGATGGCTAGATCTTCCCCATTTGACAAGCTTCTAATGGTACAATGCTTGAAGAATCAAGGCCATGTAGTGGCAGTCACCGGGGATGGAACAAATGACGCCCCAGCTCTTCACGAGGCTGACATTGGCCTTTCCATGGGAATTCAAGGAACAGAAGTGGCAAAGGAGAGCTCCGACATCGTCATCTTAGACGATAACTTTACGTCGGTCGTCACCGTCTTGAAATGGGGAAGATGTGTTTACAACAACATTCAAAAGTTCATTCAATTTCAGCTCACTGTGAACATTGCAGCATTAGTCATCAATTTCATCGCCGCTGTCTCGTCCGGTAAAGTCCCGCTAACAGCGGTACAGCTACTATGGGTGAATCTCATCATGGACACCATGGGAGCTTTAGCCTTAGCTACTGAGCTACCCACCAATGATCTCATGATGAAAACGCCGGTCGGTCGATCCGATCCATTAGTAACGAAGATCATGTGGAGGAATCTCATAACTCAGGCTGTGTATCAAGTGGCAGTCTTGCTGGTTTTGGAATTTAAAGGAAGTTCCATCTTCAATGTCAATGAGAAGGTTAAGAGCACACTGATCTTCAACACTTTTGTTCTATGCCAAATCTTCAACGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAACATATTTGAAGGGCTACACAAAAGCAAGCTGTTTTTGGCAATAATTGTGATAACCTTAGCTTTTCAAGTGGTAATGGTTGAGGTTTTGGGAAGGTTTGCCAATACATCGAGGTTGAATTGGGGCCAGTGGGGGGCATGTCTTGGCGTAGCAGCTTTGACTTGGCCAATTGGATGGCTCTCCAAGTTGATACCAGTTTCAGCCCTGCAGTTTCCATGGGGAAGAAACTCAGCACAATAA | 3081 | 45.18 | MALRCRKSDEVVEVLNREERLVMAKTHKRRWKMAFAAIYFTRALISLTRKVTGNKSGALLRSLSFVTLDVQVNDDSTDSGEQPCMAGFFGVDQKVLSEMVREKDCECLNRFGGVDGLANLLKTNPHDGICATEDDLNYRTNAFGTNTYSKRHGKSFFRFVIEAFNDTTIIILLICAVLSLGFGIKQHGWDDGWYDGGSIVIAIVLVVVVSAASNFKQSRQFEKLSNERDDIKIEVTRAGRRKSVSIFELLVGDIVYLKIGDQIPADGVFLDGHSLKIDESSMTGESEHAEVNHEINPFLLSGTKVNDGFGVMMVTSVGMNTAWGEMMSSIRREINEETPLQARLNKMTAIIGKLGLTVAVVVLLVLLARYFTGSTGEFNGSKTRFDDVMNAVLGMVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADNAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWIGEDKIMNTDYSNSRISSKVVELLHQAVGLNTTGSIQTPASSLPLEIFGSPTEKAILSWAVFDLDLNLDELKKQHEMILVETFSSEKKRSGVLTRRHGTRLVNTHWKGAAEMILAMCSYYYEKQGTARAIDGEMRRQLTEIITAMAEKSLRCIAFAHKSNEDDDIQDIPVKLDESELTLLGIVGLKDPCRPGVREAVESCRAAGVSIKMVTGDNLHTATAIAIECGILNPDDDATNSEVIVEGVKFRNYTPEERLEKIGTIRVMARSSPFDKLLMVQCLKNQGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNIAALVINFIAAVSSGKVPLTAVQLLWVNLIMDTMGALALATELPTNDLMMKTPVGRSDPLVTKIMWRNLITQAVYQVAVLLVLEFKGSSIFNVNEKVKSTLIFNTFVLCQIFNEFNARKLEKKNIFEGLHKSKLFLAIIVITLAFQVVMVEVLGRFANTSRLNWGQWGACLGVAALTWPIGWLSKLIPVSALQFPWGRNSAQ | 1026 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 10355245 | 10358325 | - | CmoCh12G011370.1 | Cmo12g01137 | 393825 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g01137 | 1026 | Gene3D | - | 446 | 801 | IPR023214 | - | |
Cmo12g01137 | 1026 | SFLD | C1.7: P-type atpase like | 431 | 809 | - | - | |
Cmo12g01137 | 1026 | Gene3D | - | 133 | 331 | - | - | |
Cmo12g01137 | 1026 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 728 | 838 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo12g01137 | 1026 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 393 | 473 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo12g01137 | 1026 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 456 | 652 | IPR023299 | GO:0000166 | |
Cmo12g01137 | 1026 | SMART | Cation_ATPase_N_a_2 | 110 | 184 | IPR004014 | - | |
Cmo12g01137 | 1026 | Pfam | E1-E2 ATPase | 232 | 427 | - | - | |
Cmo12g01137 | 1026 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 451 | 457 | IPR018303 | - | |
Cmo12g01137 | 1026 | Pfam | Cation transporter/ATPase, N-terminus | 113 | 179 | IPR004014 | - | |
Cmo12g01137 | 1026 | PRINTS | H+-transporting ATPase (proton pump) signature | 605 | 623 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo12g01137 | 1026 | PRINTS | H+-transporting ATPase (proton pump) signature | 756 | 772 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo12g01137 | 1026 | PRINTS | H+-transporting ATPase (proton pump) signature | 788 | 813 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo12g01137 | 1026 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 112 | 1014 | IPR023298 | - | |
Cmo12g01137 | 1026 | Pfam | haloacid dehalogenase-like hydrolase | 446 | 770 | - | - | |
Cmo12g01137 | 1026 | PRINTS | P-type cation-transporting ATPase superfamily signature | 278 | 292 | - | - | |
Cmo12g01137 | 1026 | PRINTS | P-type cation-transporting ATPase superfamily signature | 449 | 463 | - | - | |
Cmo12g01137 | 1026 | PRINTS | P-type cation-transporting ATPase superfamily signature | 648 | 659 | - | - | |
Cmo12g01137 | 1026 | PRINTS | P-type cation-transporting ATPase superfamily signature | 670 | 680 | - | - | |
Cmo12g01137 | 1026 | PRINTS | P-type cation-transporting ATPase superfamily signature | 756 | 775 | - | - | |
Cmo12g01137 | 1026 | PRINTS | P-type cation-transporting ATPase superfamily signature | 780 | 792 | - | - | |
Cmo12g01137 | 1026 | SFLD | p-type atpase | 431 | 809 | IPR044492 | - | |
Cmo12g01137 | 1026 | SUPERFAMILY | HAD-like | 447 | 860 | IPR036412 | - | |
Cmo12g01137 | 1026 | Pfam | Cation transporting ATPase, C-terminus | 841 | 1011 | IPR006068 | - | |
Cmo12g01137 | 1026 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 98 | 1013 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Cmo12g01137 | 1026 | Gene3D | - | 162 | 1010 | - | - | |
Cmo12g01137 | 1026 | Gene3D | - | 459 | 655 | IPR023299 | GO:0000166 | |
Cmo12g01137 | 1026 | SUPERFAMILY | Calcium ATPase, transduction domain A | 233 | 329 | IPR008250 | - | |
Cmo12g01137 | 1026 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 22 | 1006 | - | - | |
Cmo12g01137 | 1026 | PANTHER | CATION TRANSPORTING ATPASE | 22 | 1006 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g00313 | Cmo-Chr8:1930481 | Cmo12g01137 | Cmo-Chr12:10355245 | 0 | dispersed | |
Cmo08g00816 | Cmo-Chr8:5159023 | Cmo12g01137 | Cmo-Chr12:10355245 | 0 | dispersed | |
Cmo12g01137 | Cmo-Chr12:10355245 | Cmo14g00552 | Cmo-Chr14:2805352 | 0 | dispersed | |
Cmo12g01137 | Cmo-Chr12:10355245 | Cmo12g00924 | Cmo-Chr12:8557941 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g01137 | K01537 | - | csv:101218531 | 1585.47 |