Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo12g01254 ATGGTGGGTGGAGTTTTGGAGTGGATTAAAGTTTCGATTTTGGGCTGTTTTTTGGTGGTGGTGGCGCTGAGAGCGGCGGTGGTGCTGTGGTGGCGGCCGAGGAGAATCGAAGACCATTTTTTCCGGCAAGGAATTAGAGGACCTCCTTATCGTTTCTTCATCGGAAATGTTAAGGAACTTGTCGGAATGATGATTAAAGCTTCTTCTGATCATTCTTTTCCTAATTTTTCTCATAACATTCTTCCTCGTGTTCTTCCGTTTTATCATCACTGGAAGAAGATTTATGGTTCGAAATTTTTGGTGTGGTTCGGGCCGACGGTGAGATTAGCGGTGTCTGATCCGGACCTCATTCGAGAAATCTTCACATCAAAATCAGAATTCTGTGAGAAAAATGAACCTCACCCACTGGTTAAACAGCTAGAAGGCGATGGCCTCCTCAGCCTCAAAGGCCAAAAATGGGCTCTTCATCGCAAGATCATCTCTCCTTCTTTCCACATGGACAATCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTCGTGGATATGTTGGAGAAATGGTCAGCAATGTCAGCAGCTTCCGGTGAGGTGGAAATTGAAGTTTCCGAATGGTTCCAAACCCTAACCGAAGACGTCATCACTAGGACTGCCTTTGGCTCCAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCTCAACAAATGGTCCTTGCTTCCCAAGCCTTCGAGAAAGTTTTCATCCCTGGCTACAGATTCTTACCGACGAGAACAAACGTGAATTCGTGGAGACTGGATCGAGAAATAAGAAAATCGTTGTTGAAACTGATCGACCGACGTCGGGAGAGCTCGATCGAGAGCTCGAAGGATTTACTAGGGTTAATGATAAGGGCATCAAACACTTCTCCTTCATCAACTATCACTGTTAATGACATTGTTGAAGAGTGCAAAGGGTTCTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCCATGCACCCACAATGGCAGGTAAAGGCACGTGATGAGGTACTAAGGGAGTGTGGAGCACGTGACATACCCTCCAAAGATGATATTACAAAGCTTAAAACGTTGAGTATGATTGTCAATGAATCGTTACGGTTATATCCACCAACAGTGGCAACTATTCGACAAGCGAAAGCTGACGTGGAGCTTGGTGGCTACATGATTCCACGTGGCACTGAGCTGTTGATTCCGATTTTAGCAGTTCACCATGATCAAAAGATATGGGGTAATGATGTGAACGAATTCAACCCAGGGCGATTTGCTGAAGGAGTGGCTAGGGCGGCCAATCATCGAGTTGGATTCATACCATTTGGACTTGGAGCTCGAACCTGTATTGGCCAAAATTTGGCTATATTGCAAGCTAAATTGGCTCTTGCAATCATACTCCAAAGATTCTCCTTTCGGTTGGGACCTTCTTATCAGCACGCACCAGCAGTACAGATGCTACTTTATCCACGATATGGCGCACCAATTATCTTCCAAAAATTATCCACTCCATCAATCCAGCAAGATTAA 1566 44.89 MVGGVLEWIKVSILGCFLVVVALRAAVVLWWRPRRIEDHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDHSFPNFSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVDMLEKWSAMSAASGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFEKVFIPGYRFLPTRTNVNSWRLDREIRKSLLKLIDRRRESSIESSKDLLGLMIRASNTSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVKARDEVLRECGARDIPSKDDITKLKTLSMIVNESLRLYPPTVATIRQAKADVELGGYMIPRGTELLIPILAVHHDQKIWGNDVNEFNPGRFAEGVARAANHRVGFIPFGLGARTCIGQNLAILQAKLALAIILQRFSFRLGPSYQHAPAVQMLLYPRYGAPIIFQKLSTPSIQQD 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11107044 11110069 - CmoCh12G012540.1 Cmo12g01254 393942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo12g01254 521 Gene3D Cytochrome P450 30 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PANTHER CYTOCHROMEA2 7 508 - -
Cmo12g01254 521 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 SUPERFAMILY Cytochrome P450 45 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Cmo12g01254 521 Pfam Cytochrome P450 87 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo12g01254 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 508 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00614 Cmo12g01254 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00556 Cmo-Chr11:2717443 Cmo12g01254 Cmo-Chr12:11107044 0 dispersed
Cmo12g01254 Cmo-Chr12:11107044 Cmo09g00674 Cmo-Chr9:3349383 2.08E-137 dispersed
Cmo09g00342 Cmo-Chr9:1476828 Cmo12g01254 Cmo-Chr12:11107044 8.73E-35 transposed
Cmo10g00614 Cmo-Chr10:2779472 Cmo12g01254 Cmo-Chr12:11107044 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo12g01254 K15639 - csv:101208789 929.472