Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo12g01254 | ATGGTGGGTGGAGTTTTGGAGTGGATTAAAGTTTCGATTTTGGGCTGTTTTTTGGTGGTGGTGGCGCTGAGAGCGGCGGTGGTGCTGTGGTGGCGGCCGAGGAGAATCGAAGACCATTTTTTCCGGCAAGGAATTAGAGGACCTCCTTATCGTTTCTTCATCGGAAATGTTAAGGAACTTGTCGGAATGATGATTAAAGCTTCTTCTGATCATTCTTTTCCTAATTTTTCTCATAACATTCTTCCTCGTGTTCTTCCGTTTTATCATCACTGGAAGAAGATTTATGGTTCGAAATTTTTGGTGTGGTTCGGGCCGACGGTGAGATTAGCGGTGTCTGATCCGGACCTCATTCGAGAAATCTTCACATCAAAATCAGAATTCTGTGAGAAAAATGAACCTCACCCACTGGTTAAACAGCTAGAAGGCGATGGCCTCCTCAGCCTCAAAGGCCAAAAATGGGCTCTTCATCGCAAGATCATCTCTCCTTCTTTCCACATGGACAATCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTCGTGGATATGTTGGAGAAATGGTCAGCAATGTCAGCAGCTTCCGGTGAGGTGGAAATTGAAGTTTCCGAATGGTTCCAAACCCTAACCGAAGACGTCATCACTAGGACTGCCTTTGGCTCCAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCTCAACAAATGGTCCTTGCTTCCCAAGCCTTCGAGAAAGTTTTCATCCCTGGCTACAGATTCTTACCGACGAGAACAAACGTGAATTCGTGGAGACTGGATCGAGAAATAAGAAAATCGTTGTTGAAACTGATCGACCGACGTCGGGAGAGCTCGATCGAGAGCTCGAAGGATTTACTAGGGTTAATGATAAGGGCATCAAACACTTCTCCTTCATCAACTATCACTGTTAATGACATTGTTGAAGAGTGCAAAGGGTTCTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCCATGCACCCACAATGGCAGGTAAAGGCACGTGATGAGGTACTAAGGGAGTGTGGAGCACGTGACATACCCTCCAAAGATGATATTACAAAGCTTAAAACGTTGAGTATGATTGTCAATGAATCGTTACGGTTATATCCACCAACAGTGGCAACTATTCGACAAGCGAAAGCTGACGTGGAGCTTGGTGGCTACATGATTCCACGTGGCACTGAGCTGTTGATTCCGATTTTAGCAGTTCACCATGATCAAAAGATATGGGGTAATGATGTGAACGAATTCAACCCAGGGCGATTTGCTGAAGGAGTGGCTAGGGCGGCCAATCATCGAGTTGGATTCATACCATTTGGACTTGGAGCTCGAACCTGTATTGGCCAAAATTTGGCTATATTGCAAGCTAAATTGGCTCTTGCAATCATACTCCAAAGATTCTCCTTTCGGTTGGGACCTTCTTATCAGCACGCACCAGCAGTACAGATGCTACTTTATCCACGATATGGCGCACCAATTATCTTCCAAAAATTATCCACTCCATCAATCCAGCAAGATTAA | 1566 | 44.89 | MVGGVLEWIKVSILGCFLVVVALRAAVVLWWRPRRIEDHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDHSFPNFSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVDMLEKWSAMSAASGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFEKVFIPGYRFLPTRTNVNSWRLDREIRKSLLKLIDRRRESSIESSKDLLGLMIRASNTSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVKARDEVLRECGARDIPSKDDITKLKTLSMIVNESLRLYPPTVATIRQAKADVELGGYMIPRGTELLIPILAVHHDQKIWGNDVNEFNPGRFAEGVARAANHRVGFIPFGLGARTCIGQNLAILQAKLALAIILQRFSFRLGPSYQHAPAVQMLLYPRYGAPIIFQKLSTPSIQQD | 521 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 11107044 | 11110069 | - | CmoCh12G012540.1 | Cmo12g01254 | 393942 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo12g01254 | 521 | Gene3D | Cytochrome P450 | 30 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PRINTS | E-class P450 group I signature | 92 | 111 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PRINTS | E-class P450 group I signature | 208 | 226 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PRINTS | E-class P450 group I signature | 311 | 328 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PRINTS | E-class P450 group I signature | 331 | 357 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PANTHER | CYTOCHROMEA2 | 7 | 508 | - | - | |
Cmo12g01254 | 521 | PRINTS | P450 superfamily signature | 322 | 339 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | SUPERFAMILY | Cytochrome P450 | 45 | 511 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo12g01254 | 521 | Pfam | Cytochrome P450 | 87 | 489 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo12g01254 | 521 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 7 | 508 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00614 | Cmo12g01254 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g00556 | Cmo-Chr11:2717443 | Cmo12g01254 | Cmo-Chr12:11107044 | 0 | dispersed | |
Cmo12g01254 | Cmo-Chr12:11107044 | Cmo09g00674 | Cmo-Chr9:3349383 | 2.08E-137 | dispersed | |
Cmo09g00342 | Cmo-Chr9:1476828 | Cmo12g01254 | Cmo-Chr12:11107044 | 8.73E-35 | transposed | |
Cmo10g00614 | Cmo-Chr10:2779472 | Cmo12g01254 | Cmo-Chr12:11107044 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo12g01254 | K15639 | - | csv:101208789 | 929.472 |