Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00020 ATGGTTGACAACGGCGAGGAGAAGTTGCTGGCTATGGCTCGCCACATAGCCAAGACCATGGGTCGCAACGAGTCCATGGCTGATGATATTCTTCACATTTTCTCCAATTTTGATGCTAGGTTTTCCCTCGATAAGTTGTCTGATAAGCCCGATGAGCTTGATCCCAGAGGCTCCGCCGATTTGCATCGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAATACTTGGTCGCCGACCATCCAATTTGGGCTGACTCTGCTGATTCCTCTGCGTTTCTTGACGCTATCGATGAGTTGATGGCAATCATTAGGGACTGGACGCCGATGGCTAGGGATAAGTCTGTTGGGAACTACCTTGCTCGCGCTGACGATCTGATGCAGCAGGCGATGTTCCGCGTCGACCAAGAGTTCCGGTCGTTGATGGACCGTGGAGGTGAGTCTTTTGAACTTACTCGTCATTTCAGGAACGGCGAGTCAACTGGTGATTTCTGCTTCGATTCTGAGGAAGATGAGGATGTTGCGGAAGGAATTCTTGGCGATGGTCTCCAGATCCCTGTGGCGCAGCCGGTGACGGACTACAACATCGTTATCGACGCGCTTCCGTCGGGGACTATCGGCGATCTCCATGAGATATCGAAGCGTATGGTTGCGGCTGGGTTCGAGAAGGAGTGCTCGCACGCTTACAGTAGCTGCAGGAGGGAGTTCTTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAACTGAGCATCGATGAAGTTCAAAAGATGCAATGGCATGACCTTGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTAGCGTCTCCCTTCGAGTTCTCTTCCCAAGCGAACGACACCTCTGCGAACGCGTCTTCGTCGGCCTCTCCTCCACCGCTAATCTCTCTTTCATGGAGGTCTGTCGAGGATCGACGATCCAGCTACTGAATTTTGCAGATGCGGTGGCAATTGGCTCCCGCGCCCCAGAACGACTCTTCAAAATTATAGATATGTTCGAAACCTTGAGAGACTTGATGCCAGAGTTCGATTCAGTATTTCCAGACCTGTACTGTTCGTTTCTTAGAAATGAAGCACTCACAATCTGGAAAAGTTTTGGCGGAACAATCAAGGGGATCTTCATGGAGCTTGAGAATTTGATCCGTCGTGATCCGGCTAAGACTCCGGTACCGGGGGGCGGCCTTCATCCAATCACTCGATATGTGATGAATTACCTTAGAGCAGCCTGTAAGTCGCGGCAGACTCTGGAGCAAGTTTTCGAAGAAGTCGCTCTTACCTCCAAGGACTACAGCAAGCTCGAGGACAGAGCAGCAGCATCATCATCGTCATCGTTGTCAGTTCAAATGGAGTGGATTATGGAGGTTTTAGAGAGCAATTTAGAGGCGAAGTCCAAGATATACAAGGATCTTTCCTTGAGCTCTGTGTTTCTGATGAACAATGGGCGATACATTGTCCAGAAAGTGAAAGACAGTGAATTAGGATCAGTTTTAGGTGAGGATTGGATTCGAAAGCACTCCGTTAAAAACCGGCAATACCTTGGGAATTACCTGAGAAGCTCATGGAGCAAGGTGATCGGAGTGTTGAAAGTGGACAGTGGCTCTTTAGCTCCGGCTGCGATGAAGGAGAAGCTCCAATCATTCAACGTGCAGTTTGAACAAGTCTGCCAAACCCAATCCACATGGGTGATATTCGAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTCGCCAAAACCCTGTTGCCGGCATATCAAAAGTTCGTCGGAAGGTACCAGAGTTTGCCGGAGTTGGCAAAGCGTACAGACCGGTATTTGAAGTACACGGTGGAGGATGTGGAGGGTCGAATCACCGAGCTGTTCGAAGGAGGAGGAGGAGGAGGCGGCGGCGGAAGGAGGTGA 1911 50.34 MVDNGEEKLLAMARHIAKTMGRNESMADDILHIFSNFDARFSLDKLSDKPDELDPRGSADLHRSLKSLDRRISQYLVADHPIWADSADSSAFLDAIDELMAIIRDWTPMARDKSVGNYLARADDLMQQAMFRVDQEFRSLMDRGGESFELTRHFRNGESTGDFCFDSEEDEDVAEGILGDGLQIPVAQPVTDYNIVIDALPSGTIGDLHEISKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSIDEVQKMQWHDLEEEIERWMKAISVSLRVLFPSERHLCERVFVGLSSTANLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKIIDMFETLRDLMPEFDSVFPDLYCSFLRNEALTIWKSFGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLRAACKSRQTLEQVFEEVALTSKDYSKLEDRAAASSSSSLSVQMEWIMEVLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLRSSWSKVIGVLKVDSGSLAPAAMKEKLQSFNVQFEQVCQTQSTWVIFEHQLREEARISVAKTLLPAYQKFVGRYQSLPELAKRTDRYLKYTVEDVEGRITELFEGGGGGGGGGRR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 176737 178647 - CmoCh13G000200.1 Cmo13g00020 394075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00020 636 Gene3D Exocyst complex component Exo70 82 629 - -
Cmo13g00020 636 SUPERFAMILY Cullin repeat-like 83 625 IPR016159 -
Cmo13g00020 636 Pfam Exo70 exocyst complex subunit 266 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo13g00020 636 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 625 - -
Cmo13g00020 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 625 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00020 Cmo-Chr13:176737 Cmo13g00835 Cmo-Chr13:7754168 6.93E-124 dispersed
Cmo01g00735 Cmo-Chr1:3794549 Cmo13g00020 Cmo-Chr13:176737 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00020 K07195 - csv:101204511 1109.36