Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00069 ATGGCCAACGACGTCGTTTTCCCCTTCCCCACTTTTTTTCTCTCTCTCTTTCTCACCTATTTGATTTGGTTTTATTTCCTCGCCCGTAAGCTCACCGGTCCAAGAGTATGGCCGGTCATCGGCAGTCTACCGGCTCTTTTCTCGAACCGGCAGAGACTCCATGACTGGATGGCCGGGAACCTCCGCGACACAGGCGCCGCTGCCACGTACCAAACCTGCACAGTGGCGGTTCCATTCATTGCTAAAAAGCAAGGATTTTACACTGTCACGTGCCACCCGAGAAACATCGAGCACGTGCTGCGAACCCGGTTCGAAAATTACCCTAAAGGACCGGACTGGCAAGCGGCTTTTCACGATTTACTGGGACAGGGGATTTTCAACAGCGACGGCGAAATTTGGCTGATTCAGCGGAAAACGGCGGCGCTGGAGTTCACGACGAGGACGCTCCGGCAGGCGATGGATCGGTGGGTTAATCGGACGATAAGGACGCGACTGTGGTGCATTTTGGACAAGGCGGCGGAGTATAAGACGGCGGTGGATTTGCAGGATTTGTTGCTCCGGTTGACTTTTGATAATATTTGTGGGCTGACTTTTGGGAAAGATCCTGAAACTCTGTCGCCGGAATTGCCTACAAACTCCTTCGCTTTGGCCTTTGACACCGCCACTGAGGCCACTCTCCAGCGCCTTCTTTACCCTGGTCTTATATGGAGGTTCGAGAAGCTTCTGGGGATTGGAATGGAAAGAAGGTTGAAGAAGTGTCTGAAAGTGGTAGAAGAATACATAAACGACGCCGTTGCAGCCCGTAAAGAATCTCCCTCAGACGACTTATTATCACGCTTCATGAAGAAGCGCGACGACGACCGCTTCTCCGCCACCGTGCTCCACCGCATCGCATTAAACTTCGTCCTCGCCGGTCGGGACACCTCCTCCGTCGCTCTCACCTGGTTCTTTTGGCTCGTAATGAACCACCCACACGTAGAGGAAAAAATCCTCACCGAAATCTCAACGGTCCTCCGTCAAACACGTGGCGACGATATGCGCCGTTGGATCGAAGAGCCGTTGGTGTTCGACGAGGCCGACAAATTGGTGTACTTAAAAGCCGCATTGGCTGAAACGCTTCGTCTATACCCGTCCGTACCACAGGATTTCAAATATGTCGTGGCTGATGACGTGTTGCCAGATGGCACTTTTGTGCCGGCCGGTTCGACTGTGACGTATTCGATTTATTCGGTCGGGAGAATGAACAGCATTTGGGGGGAGGATTGTGAGGAATTTAAACCGGACCGGTGGTTATCGCCGGCTGGAGACCGGTTCGAGGGGCAGAAGGATGTGTATAAGTTTGTGGCGTTTAATGCTGGACCGAGGACTTGTTTGGGGAAGGATTTGGCTTATTTGCAGATGAAGTCCGTCGCCTCTGCCGTACTTCTCCGGTACCGGCTGGCGCCAGTTCCCGGTCACCGGGTGGAACAAAAGATGTCTCTCACTCTTTTTATGAAGAATGGGCTTCGTGTTTATTTGCATCCCCGCCGGCTCGGCTAG 1539 52.96 MANDVVFPFPTFFLSLFLTYLIWFYFLARKLTGPRVWPVIGSLPALFSNRQRLHDWMAGNLRDTGAAATYQTCTVAVPFIAKKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILDKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPETLSPELPTNSFALAFDTATEATLQRLLYPGLIWRFEKLLGIGMERRLKKCLKVVEEYINDAVAARKESPSDDLLSRFMKKRDDDRFSATVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEEKILTEISTVLRQTRGDDMRRWIEEPLVFDEADKLVYLKAALAETLRLYPSVPQDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMNSIWGEDCEEFKPDRWLSPAGDRFEGQKDVYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLAPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLG 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 416652 418190 - CmoCh13G000690.1 Cmo13g00069 394124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00069 512 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 Pfam Cytochrome P450 88 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 Gene3D Cytochrome P450 27 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 SUPERFAMILY Cytochrome P450 23 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Cmo13g00069 512 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo13g00069 512 PANTHER CYTOCHROME P450 12 510 - -
Cmo13g00069 512 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 12 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00069 Cmo-Chr13:416652 Cmo15g01299 Cmo-Chr15:8915667 0 dispersed
Cmo01g00687 Cmo-Chr1:3503986 Cmo13g00069 Cmo-Chr13:416652 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00069 K15401 - csv:101214516 963.755