Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00076 ATGGCTCAAAGACTAGGAACGAACAAAGTTGGCTACACTTTTGCCCCAATCATCTTCATTTGGTTTGCTTTCATCGCTGCAATTGGTGTTTACAACTTCTTCAAATACGACCCAACTGTGATCAAGGCCTTAAATCCAGCCTACATTATTTATTATTTCCAAAGGAACAAAAAGGACGCTTGGATTTCTCTCGGCGGCGTTGTTCTTTGCATTACAGGGGCAGAAGCATTGTTCGCCGATGTCGGGCATTTCAGCATCCAATCGATCCAGCTGAGCATGTCCCTGGTGACCTACCCAGCTCTGATCTGCGCTTATGCAGGCCAATCCTCGTTTCTTCGCAAGCATAGTGATCTAGTTTCAAACACATTCTACAAGTCCACTCCTGAAAGTTTGTATTGGCCAATGTTTGTGGTGGCAGTTTTAGCATCAATCATTGCAAGCCAAGCCATGATCTCAGGAACTTTCTCTATAATTCAGCAGTCACTTTCACTTGGATGCTTCCCAAGAGTTAAAGTGGTTCATACTTCTGCTAAACATGAAGGCCAAGTTTATGTTCCTGAGATCAATTACCTTCTCATGTTGGCTTGTGTTTGTATTACTTTGGTCTTCAAGAACACTACAAAGATTGGCAATGCATACGGAATAGCAGTGGTGTTTGTGATGACACTCACGTCCTCCTTCCTAGTATTGATAATGGTAATGATATGGAAAACTCACATCCTGTTGGTAATCACTTACGTTGTCATAATTGGGAGCGTGGAATTGGTGTATCTGAGTTCAGTTCTTTACAAGTTCGACCAAGGAGGGTATCTCCCTCTGGCTTTTGCAGCTGTTTTGATGATAATAATGTATGTGTGGAATAGTGTGTTTAGAAAGAAGTACTTTTATGAGCTCAGCCACAAAATCTCTCCAGAAAAGTTCAATCAAATGGTGAGTACCACCAGCTTTAGAAGACTTCCTGGCATGGCATTTTTCTACACTGAGCTCGTTCAAGGCATCCCTCCCATCATCAAGCATTACGTCGAGCATGTCCCCGCTTTGCAGTCTGTGCTCGTCTTTGTCACCATTAAATCGCTTCCTGTCAGCAAGGTTCCAGCCGACGAACGTTTCCTCTTCCGACGAGTAGAGGCAAAGGAGATCGATGTGTTTCGTTGTGTAGTTCGATATGGATACACAGAAGTGCGCGCCGAACATGAACTGTTCGAGAAGATTTTACTCAAAAGATTGGAAGAGTTCGAAAGTGATCGACGGGCATTGTGTAACTGCGATGGGAGAGTTGAAGAAGTTGAAGAAGATGGAAATGAATTTGGAGGCGTTGCAGAAGCATGGAAGCAAGGAGTTGTTCATTTCATTGGGGAAACAGAGGTGGTTGCTAAACTGGGTGCTGGGTTTGGAGATAGGATTATGATAAACTATGCCTATAGCTTCTTGAGGAGAAATTTGAGGGAAACTGATCAAGTCTTTGAAATTCCTCACAAACGTATGCTTAAAGTGGGAATGACTTATGAACTTTAG 1515 43.04 MAQRLGTNKVGYTFAPIIFIWFAFIAAIGVYNFFKYDPTVIKALNPAYIIYYFQRNKKDAWISLGGVVLCITGAEALFADVGHFSIQSIQLSMSLVTYPALICAYAGQSSFLRKHSDLVSNTFYKSTPESLYWPMFVVAVLASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKHEGQVYVPEINYLLMLACVCITLVFKNTTKIGNAYGIAVVFVMTLTSSFLVLIMVMIWKTHILLVITYVVIIGSVELVYLSSVLYKFDQGGYLPLAFAAVLMIIMYVWNSVFRKKYFYELSHKISPEKFNQMVSTTSFRRLPGMAFFYTELVQGIPPIIKHYVEHVPALQSVLVFVTIKSLPVSKVPADERFLFRRVEAKEIDVFRCVVRYGYTEVRAEHELFEKILLKRLEEFESDRRALCNCDGRVEEVEEDGNEFGGVAEAWKQGVVHFIGETEVVAKLGAGFGDRIMINYAYSFLRRNLRETDQVFEIPHKRMLKVGMTYEL 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 464781 466689 + CmoCh13G000760.1 Cmo13g00076 394131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00076 504 Pfam K+ potassium transporter 2 393 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo13g00076 504 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 503 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo13g00076 504 PANTHER POTASSIUM TRANSPORTER 1 503 - -
Cmo13g00076 504 TIGRFAM kup: potassium uptake protein 2 503 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00076 Cmo-Chr13:464781 Cmo14g00918 Cmo-Chr14:4863779 0 dispersed
Cmo13g00076 Cmo-Chr13:464781 Cmo14g00914 Cmo-Chr14:4840633 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00076 K03549 - csv:101215797 811.216