Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00188 ATGGCTGCCGCAGGCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTGGCCGTCGTCTGCTTCATCTTACTCTTCATCTCCATCATCATCGAATATATAATCCACCTCATCGGACAGTGGCTGAAGAAGAGACACAAACGAGCTTTATTTGAAGCTCTTGAGAAGATCAAATCAGAGTTGATGTTATTGGGATTCATATCGCTGCTTTTAACGGTCGGGCAAGGTCCGATCTCTGACATATGTATTCCTGAACACGTGGCTGCCACGTGGCATCCTTGTACGAAGGAGAAAGAAGCGAAGATGAATGAAGATATGGAGAAATCCGTGGAACATTTGGCTAATAATGGCCGGAGACTCCTCCATCTGAACGGAACTGGTGGAAGTTTCCGGCGGGTTTTGGCCGCGCCTGGTGGAGCCGACAAGTGTGCTGCTAAGGGATTAGTGTCGTTTATTTCCGCAGAAGGAATTCATCAACTTCATATCTTCATATTTGTGTTGGCAGTTTGTCATGTCTTGTATTGTGTCCTAACGTATGCTTTGGCTAGAGCAAAGATGAGGAGTTGGAAAACATGGGAAAAGGAAACCAAAACGGCGGAATACCAATTCTCACACGATCCCGAGAGATTTAGGTTTGCAAGAGACACCTCGTTCGGGAGAAGACATCTGAACTTCTGGACGAAGAATTCTGCTCTAATGTGGATAGTTTGTTTCTTCCGGCAGTTTGTAAGATCGGTTCCAAAAGTTGATTACTTGACGTTACGACACGGATTTATAATGGCACATTTAGCTCCTCAAAGTCATACACAATTCGATTTCCAAAAGTACATTAATCGTTCTCTTGAAGAAGACTTCAAAGTGGTCGTGGGAATCAGCCCACCAATCTGGTTCTTCGCTGTGCTATTCCTCCTCTCAAACACACACGGTTGGAGGGCATATCTATGGCTGCCATTCATCCCATTAATCATTCTGCTGCTGATCGGGACGAAGTTGCAGGTGATCATAACGAAGATGGCGCTGAGAATACAAGAGCGCGGGGAAGTGGTGAAGGGCGTGCCGGTGGTGGAGCCTGGCGATGACCTGTTCTGGTTCAATCGCCCTCGCCTCATTCTTTATCTTATTAACTTCGTTCTCTTTCAAAACGCTTTCCAAGTTGGCTTCTTTGCTTGGACTTGGTATGAGTTCGGGCTGAATTCTTGTTTTCACGAGCACGTAGAGGATGTGGTGATCAGAATCTCAATGGGGGTGATTGTACAAATCCTTTGCAGTTATGTAACTCTACCTCTTTATGCATTAGTTACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAATGAGAGAGTGGCAGCAGCCCTTCGAAATTGGTACCACACGGCTCGAAAGCACATCAAACACAATCGTGGTTCGATCACCCCAATGTCGAGTCGACCCACCACTCCAACTCACCACATGTCACCAGTTCACCTTCTTCGACATTACAAGAGTGAGGTCGATAGCTTCCATAACTCGCCGAGAAGGTCACCTGTTGAACTTGATCGTTGGGACAATGATTCGCCTTCCCCCTCTCGTCATGCTGATGGTTCGTCCTCGTCACAACCCCACGTTGAGATGGGGGGAAGCTATGATAAAGATCCAATTGAACCGGGTTTGACTGAAGTTAACCTTGTTCGACCGTCTCGAACGCGTACTCAACATGAGATTGATATTGGTCATAAAGACTTTTCGTTTGATAGAATTGAATGA 1749 46.54 MAAAGGGKSLEQTPTWAVAVVCFILLFISIIIEYIIHLIGQWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPISDICIPEHVAATWHPCTKEKEAKMNEDMEKSVEHLANNGRRLLHLNGTGGSFRRVLAAPGGADKCAAKGLVSFISAEGIHQLHIFIFVLAVCHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLNFWTKNSALMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVGFFAWTWYEFGLNSCFHEHVEDVVIRISMGVIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHTARKHIKHNRGSITPMSSRPTTPTHHMSPVHLLRHYKSEVDSFHNSPRRSPVELDRWDNDSPSPSRHADGSSSSQPHVEMGGSYDKDPIEPGLTEVNLVRPSRTRTQHEIDIGHKDFSFDRIE 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1302615 1307908 - CmoCh13G001880.1 Cmo13g00188 394243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00188 582 MobiDBLite consensus disorder prediction 561 582 - -
Cmo13g00188 582 MobiDBLite consensus disorder prediction 501 582 - -
Cmo13g00188 582 Pfam Mlo family 8 495 IPR004326 GO:0006952|GO:0016021
Cmo13g00188 582 PANTHER MLO-LIKE PROTEIN 2 579 - -
Cmo13g00188 582 Coils Coil 97 117 - -
Cmo13g00188 582 MobiDBLite consensus disorder prediction 523 538 - -
Cmo13g00188 582 MobiDBLite consensus disorder prediction 501 522 - -
Cmo13g00188 582 PANTHER MLO-LIKE PROTEIN 1 2 579 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00188 Cmo-Chr13:1302615 Cmo18g00890 Cmo-Chr18:10160316 0 dispersed
Cmo13g00188 Cmo-Chr13:1302615 Cmo13g00190 Cmo-Chr13:1336245 1.95E-174 proximal
Cmo01g00568 Cmo-Chr1:2853633 Cmo13g00188 Cmo-Chr13:1302615 5.40E-154 wgd
Cmo13g00188 Cmo-Chr13:1302615 Cmo02g00883 Cmo-Chr2:5467485 0 wgd
Cmo13g00188 Cmo-Chr13:1302615 Cmo20g00511 Cmo-Chr20:2450421 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00188 K08472 - csv:101217225 1036.94