Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00190 ATGGCCGCCGCTGCTGCTGCTCTGGATCCTTCCTCCCTGCAATTCACGCCGACTTGGGCCGTGGCTGCGGTTTGCTTTATCTTCATCTCCCTCTCCCTCTTCCTCGAGCATTTGATTCATCTCCTCTCCAATTGGTTGAAGCGGAAGAGGAAAACGGCATTGTTCGAGGCCGTTGAGAAGCTGAAATCAGTTTTGATGCTTCTAGGGTTCATGTCGCTAACTCTGACGGTTACGCAACAGCCAGTATCGAAGATTTGCATTCCGAATAGCGTAGCGTTTACGATGCTTCCGTGCCAGAGAGAAATACAGATCAAAGCGAATAAGAATTTGGAGATGGAGCAATTGCGATCGTCTAGTAGCGGTGATTCTTCTTCTTCTTCTTCTTCTTCTGATTACTGTAGTGCGAAGGGGAAGGCGTCGCTGATATCGCAAGGAGGAATGAATCAATTGAACAATTTCATATTCGTGTTGGCAGCTATGCAGATTCTTTACAGCCTTCTCACCATGGCGTTAGGAAAGGCCAAGATGAGACGCTGGAAAGCTTGGGAAGAAGAAACTCATACATTGGATTATCAAGTGGCCAATGATCCGCATCGCTTTAGATTTACAAGGCAAACAACATTCGGACGTCGGCATATCAGTTCTTGTGCAACACCACCATTTCTTCTCTGGATAAAATGCTTCTTGAGACAGTTCTTTCGTTCGGTGGCCAAAGTCGACTACTTGACCCTTCGCCATGGTTTCATCTCGACTCATATACAGGGAAATACTTCCTTCAACTTTCAAAAATATATTGAGAGATCATTGCACGATGATTTCAAAGTCGTGGTCGGCATCAGTCCTTTCATGTGGCTTATGGTAGTCATCTTCATTCTTGTAGATGTTCATGGTTGGAATGCGTATCTCTGGGTGTCTTTCCTTCCACTAATTATAGTGCTAGCTCTTGGAACAAAACTTGAAGTAATAGTAGCAAGGCTTGCCCTTGAGCTTCAAGACAAGACCGATGTGATCAAAGGAGCTCCAATGGTGGAACCTAGTGATGATCTTTTCTGGTTCAATCACCCCAAATTTGTTCTCACCCTTCTTCATTTCACTTTGTTCATGAACGCCTTTGAATTTTCGTTTTTCATCTGGGTTACGCTACAATATGGGATAAAATCTTGCTACCACGAACACTTGGAGGTCATCATCATAAGAGTCGTCTTAGCGGTCACCGTCCAAGTGTTGTGCAGCTACATTACTTTACCTCTTTATGCTCTGGTCACACAGATGGGGTCACAGTTCAAAGCTGCAGCATTAGAAGAACACACCGCCAAAGCCATAAAGCAATGGCACAAAGATGTGAAGCAAAGGAGAAAGAAGCATCACCATCACTATCACCATGACCTCGATTCGAGTTTGCACCAGGAAGGATCGTCTCATTCCACGGTCACCGAGCGTCAGTCGTCGAGAGTTTTCGAGAGCAGCAGCAGCAGCAGAACCCTAAGCTCCCAAGAGATGGTGAGCTCTTTCCATCACCGAGCTCCTACTTTCTCTGAGCTCAACAATCTTGATATTATTGAGTCTAATGAGATAGTTGAAGTACCAACGAAGATAAAAATAAGAGAAATTAATGAAATTCACGAAGAAAAAACCTTAACTACTCAAACTCAAAGATGGGTTTCATAG 1668 44.42 MAAAAAALDPSSLQFTPTWAVAAVCFIFISLSLFLEHLIHLLSNWLKRKRKTALFEAVEKLKSVLMLLGFMSLTLTVTQQPVSKICIPNSVAFTMLPCQREIQIKANKNLEMEQLRSSSSGDSSSSSSSSDYCSAKGKASLISQGGMNQLNNFIFVLAAMQILYSLLTMALGKAKMRRWKAWEEETHTLDYQVANDPHRFRFTRQTTFGRRHISSCATPPFLLWIKCFLRQFFRSVAKVDYLTLRHGFISTHIQGNTSFNFQKYIERSLHDDFKVVVGISPFMWLMVVIFILVDVHGWNAYLWVSFLPLIIVLALGTKLEVIVARLALELQDKTDVIKGAPMVEPSDDLFWFNHPKFVLTLLHFTLFMNAFEFSFFIWVTLQYGIKSCYHEHLEVIIIRVVLAVTVQVLCSYITLPLYALVTQMGSQFKAAALEEHTAKAIKQWHKDVKQRRKKHHHHYHHDLDSSLHQEGSSHSTVTERQSSRVFESSSSSRTLSSQEMVSSFHHRAPTFSELNNLDIIESNEIVEVPTKIKIREINEIHEEKTLTTQTQRWVS 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1336245 1341755 + CmoCh13G001900.1 Cmo13g00190 394245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00190 555 MobiDBLite consensus disorder prediction 469 491 - -
Cmo13g00190 555 PANTHER MLO-LIKE PROTEIN 1 8 504 IPR004326 GO:0006952|GO:0016021
Cmo13g00190 555 PANTHER MLO-LIKE PROTEIN 8 504 - -
Cmo13g00190 555 Pfam Mlo family 12 481 IPR004326 GO:0006952|GO:0016021
Cmo13g00190 555 MobiDBLite consensus disorder prediction 459 491 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g00190 Cmo20g00511 CCT
Cmo02g00883 Cmo13g00190 CCT
Cmo02g00883 Cmo13g00190 ECH
Cmo13g00190 Cmo20g00511 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00568 Cmo-Chr1:2853633 Cmo13g00190 Cmo-Chr13:1336245 0 dispersed
Cmo13g00190 Cmo-Chr13:1336245 Cmo18g00890 Cmo-Chr18:10160316 5.31E-176 dispersed
Cmo13g00188 Cmo-Chr13:1302615 Cmo13g00190 Cmo-Chr13:1336245 1.95E-174 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00190 K08472 - csv:101221560 827.394