Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00208 ATGATTGTATCAGCAACGCCGAGTTCCAATGCCGGAATTGGGAGTGGAGAGCTTGGCAGTTTTGTCCGACAAGTGGTGGCGGGGCGGTGGTTTTCTCTCTTCGCTTCGTTTCTTGTTATGGCCGGCGCCGGCGGAGTTTATTTGTTTGCTTATTACTCTAGAGACATCAAAACGACGCTCCAATGCGACCAAACGACGCTCAATAAGATTGGGTTTTACAAAGACCTGGGATCCAATGTTGGCATTGTCGCCGGCCTTCTGGCGGAGGTGGCGCCGACTTGGGTCCTTCTCCTCATCGGCGCCGCCTTAAACTTCGTCGGCTATTTCAAGATATGGCAAGGCGTCACCGGGAAAATTGTCAGCCCCACCGTCGCGTATTTTTGCTTTTACATTATGGTCGGAGCAAACTCTCAGAATTTCGCCAATACAGGCGTGCTAGTCACGTGCGTGAAGAACTTCCCGGAAAGAAGAGGGGTAATGTTGGGGCTTGCGAAGGGGTTCGTGGGTCTAAGCGGAGCAATCATGACCCAAATTTACACCGCCATTTACGGCGACGATACCAGGTCGCTAATTCTGCTACTCGGCTGGCTCCCTTCTTTAATCTCTTTGATTTTCATCTCCACCATCAGAGAAATCAAAGCCGTCAAACACCCAAACGAGTTCAGAGTCTTCGTCCACTTCCTCTGCGTCTCCGTCATTCTCGCTCTCTTTCTCGCCGCCTTGGTCTTCATCCAGAAACGAATCCGATTCGACCAATCCGCCCACGCCGCCGTCGTCGCCGCCATCGCGTCTCTGCTTCTTCTCCCCTTGTTAATCGCCATTAGAGAAGAAATCGTTCTATGGAATCTCAACAAACGGACGATCGGGATTCACCAGCCGCAAACATCCCCAAATCCTCCTTCTTCCTCCAACAAACCCTCCAGAGGCGAAGACCACACCATTCCTCAAGCCATTTTCAGCGCCGATATGCTCATCTTATGCATCACCATGCTAATCGGCGTCGGCGCTAGCTTGACCGCCATCGACAATCTCCGCCAGATCGGTGAATCCCATGGCTACCCATCCGAAACAATCAACTCATTGATCGTTCTGGTTAGTATTTTCAACTTCACCGGAAGAATCTTTTCTGGGTTTGTCTCTGACATTTTACTCGAGAAGTTCAAATTCCCAAGGCCATTAATGCTCACGCTTGTCCTCTTGGTTTCCTGCATTGGCCATCTTTTGGTAGCCTTCCCCTTCAATGATTCGCTATACATTGCATCCATTGTTATTGGGTTTTCATTGGGCGCTCAAGTCCCATTGCATTTCGCCATGATTTCTGAGCTTTTTGGGTTGAAACATTACTCCACGTTGTTTAATTTTGGGCAATTGTTTTGCCCAATTGGGTCTTATATTCTGAATGTGATGGTCACTGGGAGGCTCTATGATGAGATGGCGAAGACCACGACTGGTATAGGTGGCCTTCATTGTGAAGGCCATTCTTGTTATGAACAGTCGTTCGTAATTTTAGCTGGGTTGACGTTTTTTGTAGCGTTGGTGTCGTTGATTTTGGTGGAGAGGACGAGGGAGTTTTATAAAGGGGATATATATAAGAAGTTTAGGGAAGATATGGAGTCTTTGAAGACGAAAATGGAGTTTTATACTCTCGATGAGAAGAGGACTAGGATTGGGAATTTACTTGTTGACAAACATAGCATTAATATCAAGTCGTGA 1713 47.93 MIVSATPSSNAGIGSGELGSFVRQVVAGRWFSLFASFLVMAGAGGVYLFAYYSRDIKTTLQCDQTTLNKIGFYKDLGSNVGIVAGLLAEVAPTWVLLLIGAALNFVGYFKIWQGVTGKIVSPTVAYFCFYIMVGANSQNFANTGVLVTCVKNFPERRGVMLGLAKGFVGLSGAIMTQIYTAIYGDDTRSLILLLGWLPSLISLIFISTIREIKAVKHPNEFRVFVHFLCVSVILALFLAALVFIQKRIRFDQSAHAAVVAAIASLLLLPLLIAIREEIVLWNLNKRTIGIHQPQTSPNPPSSSNKPSRGEDHTIPQAIFSADMLILCITMLIGVGASLTAIDNLRQIGESHGYPSETINSLIVLVSIFNFTGRIFSGFVSDILLEKFKFPRPLMLTLVLLVSCIGHLLVAFPFNDSLYIASIVIGFSLGAQVPLHFAMISELFGLKHYSTLFNFGQLFCPIGSYILNVMVTGRLYDEMAKTTTGIGGLHCEGHSCYEQSFVILAGLTFFVALVSLILVERTREFYKGDIYKKFREDMESLKTKMEFYTLDEKRTRIGNLLVDKHSINIKS 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1599587 1601594 - CmoCh13G002080.1 Cmo13g00208 394263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00208 570 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 14 541 - -
Cmo13g00208 570 SUPERFAMILY MFS general substrate transporter 230 523 IPR036259 -
Cmo13g00208 570 CDD MFS_Mch1p_like 28 511 - -
Cmo13g00208 570 Gene3D MFS general substrate transporter like domains 320 555 IPR036259 -
Cmo13g00208 570 Coils Coil 530 550 - -
Cmo13g00208 570 MobiDBLite consensus disorder prediction 291 310 - -
Cmo13g00208 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 541 - -
Cmo13g00208 570 Pfam Nodulin-like 29 274 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00208 Cmo-Chr13:1599587 Cmo13g00210 Cmo-Chr13:1627205 0 dispersed
Cmo18g00914 Cmo-Chr18:10319980 Cmo13g00208 Cmo-Chr13:1599587 0 dispersed
Cmo13g00208 Cmo-Chr13:1599587 Cmo13g00209 Cmo-Chr13:1606140 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00208 - - csv:101202941 863.603