Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00213 ATGATCCGAAAGGAGCGTCCATTAGCCCAATTGGTGACCATGGGCAACAACCGTGGAGGAGAAAGTTGGCTATTTGTGAAACAAGTCGTTGAAGGACGTTGGTTTTCAGTATTCACCTCTTTTCTAATCATGATCGGCTGTGGTTCACCTTATTTGTTCGGAACATACTCCAAACTCCTAAAAACAAAATTTGACTACAATCAAACCCAACTTAATACCTTGGGATTCGCTAAAGATCTCGGCTCCAACCTTGGAGTTTTTGCCGGGCTTTTCGCCGAGGTGGCTCCGCCGTGGATGCTTTTCCTTGTGGGGATATCCTCCAATTTCTTCAGCTACTTTATGATTTGGCTCTCAGTTTCTAACTACGTCTCGAAACCCCAATTATGGCTAATGTTTGTTTACATCTATATTACTTCTAATTCACAGAACTTCCCCAACACCGCTGTTATGGTCACCAGCGTAGGAAATTTTCCTGATCAACGCGGTATCATTTTGGGCCTTCTCAAGGGTTTCGTTGGCCTCGGTGGAGCCATCCTAACTCAAATTAATTTAGCAATTTACGGCAACCAAAATTCTATGGATCTTCTCCTCCTTCTTTCATGGCTACCCTCCATTGTATGTTCCTTGTGTTTTCTTCCAATTCGGACAATCAAAGCTCGAAAGCATCCACAGGAGCTCAAAGTGTTCTACCACTTGCTTTACGTTTCCATAGCGATAGCGGTGTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGTTTTCTCTCAGGCTGGCTATGCCAGTGGCGTCGCGGTCATCGTCCTCTTAATCTGTCTGCCCCTTCTGATAGCTATTAAAGAAGAACTTTTTCTCTTCAAACTCGATAAACAAACTATGAATCCTTCTGTTCTTGTTTCGATTCCCCATGAACAACTTGAGGAAATTTCTTTGCCGAGTGTCTCAAATGTATGTAAGAAGCCCAAAAGAGGAGAAGATTTCAGCATTTTGCAAGCTCTTCTAAGCAAAGATATGACTCTTATTTTCATAGCAACTGTTTCTGCATGTGGGTCCTCCGTTGCAGCCATTGACAATCTTGGGCAGATCGCCGAGTCACTTGAATATCCAAACCATTCCATAAGTATACTGGTTTCATGGATTTCTATATTCAATTTCTTTGGTCGAGTCTTCTCTGGTTTCATCTCTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTCGGTCTTACACAACTTTTCACCTGCACCGGCTTGCTCTCCATCGCTTTCCCTTATATAAATTCAGTCTATATAGCTTCATTGATCATTGGGTTTGGCCTTGGAGCCCAAACTCCATTGATATTCGCCATAATCTCTGATCTCTTCGGCCTCAAACATTACTCGACACTGCTCAACTGTGGGCAACTGGCTGTCCCACTTGGATCTTATATAATGAACGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGGAAGGGCCTAACTTGCACTGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTGCAGTGACTTTGTTTGGAGCGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTCTACAAAGGCGATGTATATAAGAAATACAGAGATGACATAGGGGTTACGCAGTCGAACGTGGAATTATATTCTGCCGATGATAGGAACAATGAACACAAAAAGATAACTGATGATCGAAGTAAA 1749 42.54 MIRKERPLAQLVTMGNNRGGESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVSKPQLWLMFVYIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSMDLLLLLSWLPSIVCSLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNIVFSQAGYASGVAVIVLLICLPLLIAIKEELFLFKLDKQTMNPSVLVSIPHEQLEEISLPSVSNVCKKPKRGEDFSILQALLSKDMTLIFIATVSACGSSVAAIDNLGQIAESLEYPNHSISILVSWISIFNFFGRVFSGFISETLMTKYKLPRPFMFGLTQLFTCTGLLSIAFPYINSVYIASLIIGFGLGAQTPLIFAIISDLFGLKHYSTLLNCGQLAVPLGSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTRDFYKGDVYKKYRDDIGVTQSNVELYSADDRNNEHKKITDDRSK 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1665792 1669496 - CmoCh13G002130.1 Cmo13g00213 394268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00213 583 Pfam Major Facilitator Superfamily 341 537 IPR011701 GO:0022857|GO:0055085
Cmo13g00213 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 556 - -
Cmo13g00213 583 Gene3D MFS general substrate transporter like domains 337 543 IPR036259 -
Cmo13g00213 583 SUPERFAMILY MFS general substrate transporter 235 541 IPR036259 -
Cmo13g00213 583 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 17 556 - -
Cmo13g00213 583 Pfam Nodulin-like 33 279 IPR010658 -
Cmo13g00213 583 SUPERFAMILY MFS general substrate transporter 16 222 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00213 Cmo-Chr13:1665792 Cmo13g00216 Cmo-Chr13:1698204 0 dispersed
Cmo13g00213 Cmo-Chr13:1665792 Cmo13g00214 Cmo-Chr13:1677660 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00213 - - cmos:111464768 1107.82