Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00214 ATGATCGGCTGCGGTTCACCTTACTTGTTCGGAACATACTCCAAACTCTTAAAAACAAAATTCGACTACAATCAAACCCAACTTAATACCTTGGGATTTGCTAAAGATCTCGGCTCCAACCTCGGAGTTTTTGCCGGGCTTTTCGCCGAGGTGGCTCCTCCGTGGATGCTTTTCCTTGTGGGGATATCCTCCAATTTCTTCAGCTACTTTATGATTTGGCTCTCCGTTTCTAGCTACGTCCCAAAACCCCATTTATGGCTAATGTTTGTTTACATCTATATTACTTCTAATTCACAGAACTTCCCCAACACCGCCGTTATGGTCACTAGCGTTGGAAATTTTCCTGATCAACGCGGTATCATTTTGGGCCTTCTCAAGGGTTTCGTTGGCCTCGGTGGTGCCATCCTAACTCAGATTAATTTAGCAATCCACGGCAACCAAAATTCTATGGATCTTCTCCTCCTTCTTTCATGGCTACCCTCCATTGTATGTTTCTTGTGTTTTCTTCCAATTCGGACAATCAAAGCTCGAAAGCATCCACAGGAGCTCAAAGTGTTCTACCACTTGCTTTACGTGTCCATAGCGATAGCGGTGTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGCTTTCTCTCAAGCTGGCTATGCCGGTGGCGTCGCGGTCATCGGCGTCTTAATCTGTCTGCCCCTTCTAATAGCTATTAAAGAAGAACTTTTTCTCTTCAAACTCGGTAAACAAACCATGAATCCTTCTGTTGTTGTTTCGATTCCCCGTGAACAACTTAAGGAAATTTCAAAAATTTCTTTGCCGAGTGTCTTAAATGTATGTAAGGAGCCGCAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTCTTCTAAGCAAAGACATGGCTCTTATTTTCATAGCAACGGTGTCTGCATGTGGGTCGTCCGTTGCAGCCATTGACAATCTTGGGCAGATCGCCGAGTCACTTAAATATCCAAATCATTCAATAAGTATTTTGGTTTCATGGATTTCCATATTCAATTTCTTTGGTCGGGTCTTCTCCGGTTTCATCTCTGAAACCCTTATGACCAAATACAAATTACCCCGCCCTTTCATGTTCGGTCTTACCCAAGTTTTTACCTGCACCGGCTTGCTCTCCATCGCATTCCCTTATATAAATTCAGTCTATGTAGCTTCGTTGATCATTGGGTTTGGCCTTGGAGCCCAAACTCCATTGATATTCGCCATAATCTCTGATCTCTTCGGCCTCAAACATTACTCGACACTGCTCAACTGTGGGCAACTGGCTGTCCCACTTGGATCTTATATAATGAACGTGGAAGTAATAGGGAGATTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAATGGGAAGGGCCTAACTTGCACTGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTGCAGTGACGTTGTTTGGAGCGATGGCTTCATTTGTACTATCTTATAGAACTCGAGACTTCTACAAAGGTGATGTATATAAGAAATACAGAGATGACATGGAGGTTAAGCATTCGAACGTGGAATTATATTCTTCCGATGATAAGAACAATGAACACAAAATGAAAACTGATGATCAAAGTAAATAA 1632 42.52 MIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSSYVPKPHLWLMFVYIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIHGNQNSMDLLLLLSWLPSIVCFLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNIAFSQAGYAGGVAVIGVLICLPLLIAIKEELFLFKLGKQTMNPSVVVSIPREQLKEISKISLPSVLNVCKEPQRGEDFSILQALLSKDMALIFIATVSACGSSVAAIDNLGQIAESLKYPNHSISILVSWISIFNFFGRVFSGFISETLMTKYKLPRPFMFGLTQVFTCTGLLSIAFPYINSVYVASLIIGFGLGAQTPLIFAIISDLFGLKHYSTLLNCGQLAVPLGSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLSYRTRDFYKGDVYKKYRDDMEVKHSNVELYSSDDKNNEHKMKTDDQSK 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1677660 1679291 - CmoCh13G002140.1 Cmo13g00214 394269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00214 543 Gene3D MFS general substrate transporter like domains 298 538 IPR036259 -
Cmo13g00214 543 SUPERFAMILY MFS general substrate transporter 7 504 IPR036259 -
Cmo13g00214 543 Pfam Nodulin-like 4 236 IPR010658 -
Cmo13g00214 543 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 1 519 - -
Cmo13g00214 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00214 Cmo-Chr13:1677660 Cmo13g00227 Cmo-Chr13:1768272 0 dispersed
Cmo13g00220 Cmo-Chr13:1733680 Cmo13g00214 Cmo-Chr13:1677660 3.13E-21 dispersed
Cmo13g00213 Cmo-Chr13:1665792 Cmo13g00214 Cmo-Chr13:1677660 0 tandem
Cmo13g00214 Cmo-Chr13:1677660 Cmo13g00215 Cmo-Chr13:1693628 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00214 - - cmos:111464768 986.097