Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00216 ATGACACCAGGAGCTGCAAATGATGTTATGGAAGGGCGTCCATTAGCCCAATTGGTGACCATGGGCAACAACCGTGGAGGAGAAAGTTGGCTATTTGTGAAACAAGTCGTTGAAGGACGTTGGTTTTCAGTATTCACCTCTTTTCTAATCATGATCGGCTGTGGTTCACCTTATTTGTTCGGAACATACTCCAAACTCCTAAAAACAAAATTTGACTACAATCAAACCCAACTTAATACCTTGGGATTCGCTAAAGATCTCGGCTCCAACCTTGGAGTTTTTGCCGGGCTTTTCGCCGAGGTGGCTCCGCCGTGGATGCTTTTCCTTGTGGGGATATCCTCCAATTTCTTCAGCTACTTTATGATTTGGCTCTCAGTTTCTAACTACGTCTCGAAACCCCAATTATGGCTAATGTTTGTTTACATCTATATTACTTCTAATTCACAGAACTTCCCCAACACCGCTGTTATGGTCACCAGCGTAGGAAATTTTCCTGATCAACGCGGTATCATTTTGGGCCTTCTCAAGGGTTTCGTTGGCCTCGGTGGAGCCATCCTAACTCAAATTAATTTAGCAATTTACGGCAACCAAAATTCTATGGATCTTCTCCTCCTTCTTTCATGGCTACCCTCCATTGTATGTTCCTTGTGTTTTCTTCCAATTCGGACAATCAAAGCTCGAAAGCATCCACAGGAGCTCAAAGTGTTCTACCACTTGCTTTACGTTTCCATAGCGATAGCGGTGTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGTTTTCTCTCAGGCTGGCTATGCCAGTGGCGTCGCGGTCATCGTCCTCTTAATCTGTCTGCCCCTTCTGATAGCTATTAAAGAAGAACTTTTTCTCTTCAAACTCGATAAACAAACTATGAATCCTTCTGTTCTTGTTTCGATTCCCCATGAACAACTTGAGGAAATTTCTTTGCCGAGTGTCTCAAATGTATGTAAGAAGCCCAAAAGAGGAGAAGATTTCAGCATTTTGCAAGCTCTTCTAAGCAAAGATATGACTCTTATTTTCATAGCAACTGTTTCTGCATGTGGGTCCTCCGTTGCAGCCATTGACAATCTTGGGCAGATCGCCGAGTCACTTGAATATCCAAACCATTCCATAAGTATACTGGTTTCATGGATTTCTATATTCAATTTCTTTGGTCGAGTCTTCTCTGGTTTCATCTCTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTCGGTCTTACACAACTTTTCACCTGCACCGGCTTGCTCTCCATCGCTTTCCCTTATATAAATTCAGTCTATATAGCTTCATTGATCATTGGGTTTGGCCTTGGAGCCCAAACTCCATTGATATTCGCCATAATCTCTGATCTCTTCGGCCTCAAACATTACTCGACACTGCTCAACTGTGGGCAACTGGCTGTCCCACTTGGATCTTATATAATGAACGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGGAAGGGCCTAACTTGCACTGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTGCAGTGACTTTGTTTGGAGCGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTCTACAAAGGCGATGTATATAAGAAATACAGAGATGACATAGGGGTTACGCAGTCGAACGTGGAATTATATTCTGCCGATGATAGGAACAATGAACACAAAAAGATAACTGATGATCGAAGTAAATAA 1773 42.53 MTPGAANDVMEGRPLAQLVTMGNNRGGESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVSKPQLWLMFVYIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSMDLLLLLSWLPSIVCSLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNIVFSQAGYASGVAVIVLLICLPLLIAIKEELFLFKLDKQTMNPSVLVSIPHEQLEEISLPSVSNVCKKPKRGEDFSILQALLSKDMTLIFIATVSACGSSVAAIDNLGQIAESLEYPNHSISILVSWISIFNFFGRVFSGFISETLMTKYKLPRPFMFGLTQLFTCTGLLSIAFPYINSVYIASLIIGFGLGAQTPLIFAIISDLFGLKHYSTLLNCGQLAVPLGSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTRDFYKGDVYKKYRDDIGVTQSNVELYSADDRNNEHKKITDDRSK 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1698204 1700286 - CmoCh13G002160.1 Cmo13g00216 394271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00216 590 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 24 563 - -
Cmo13g00216 590 SUPERFAMILY MFS general substrate transporter 25 229 IPR036259 -
Cmo13g00216 590 SUPERFAMILY MFS general substrate transporter 243 548 IPR036259 -
Cmo13g00216 590 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 24 563 - -
Cmo13g00216 590 Pfam Nodulin-like 40 286 IPR010658 -
Cmo13g00216 590 Gene3D MFS general substrate transporter like domains 344 550 IPR036259 -
Cmo13g00216 590 Pfam Major Facilitator Superfamily 348 544 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00213 Cmo-Chr13:1665792 Cmo13g00216 Cmo-Chr13:1698204 0 dispersed
Cmo13g00216 Cmo-Chr13:1698204 Cmo13g00218 Cmo-Chr13:1713289 0 dispersed
Cmo13g00215 Cmo-Chr13:1693628 Cmo13g00216 Cmo-Chr13:1698204 0 tandem
Cmo13g00216 Cmo-Chr13:1698204 Cmo13g00217 Cmo-Chr13:1701738 2.51E-76 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00216 - - cmos:111464768 1107.82