Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00218 ATGGTGTCCCAAGCTGAAATAAACAGCAACTTCCTATTCTACACCCTGTCAACAGTCAGCTTTCAGCGTCCATTAGCCCAATTGGTGACCATGGGCAACAACCGTGGAGGAGAAAGTTGGCTATTTGTGAAACAAGTCGTTGAAGGACGTTGGTTTTCAGTATTCACCTCTTTTCTAATCATGATCGGCTGTGGTTCACCTTATTTGTTCGGAACATACTCCAAACTCCTAAAAACAAAATTTGACTACAATCAAACCCAACTTAATACCTTGGGATTCGCTAAAGATCTCGGCTCCAACCTTGGAGTTTTTGCCGGGCTTTTCGCCGAGGTGGCTCCGCCGTGGATGCTTTTCCTTGTGGGGATATCCTCCAATTTCTTCAGCTACTTTATGATTTGGCTCTCTGTTTCTAACTACGTCTCGAAACCCCAATTATGGCTAATGTTTGTTTACATCTATATTACTTCTAATTCACAGAACTTCCCCAACACCGCTGTTATGGTCACCAGCGTTGGAAATTTTCCTGATCAACGCGGTATCATTTTGGGCCTTCTCAAGGGTTTCGTTGGCCTCGGTGGAGCCATCCTAACTCAAATTAATTTAGCAATTTACGGCAACCAAAATTCTATGGATCTTCTCCTCCTTCTTTCATGGCTACCCTCCATTGTATGTTCCTTGTGTTTTCTTCCAATTCGGACAATCAAAGCTCGAAAGCATCCACAGGAGCTCAAAGTGTTCTACCACTTGCTTTACGTTTCCATAGCGATAGCGGTGTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGTTTTCTCTCAGGCTGGCTATGCCAGTGGCGTCGCGGTCATCGTCGTCTTAATCTGTCTGCCCCTTCTGATAGCTATTAAAGAAGAACTTTTTCTCTTCAAACTCGATAAACAAACTATGAATCCTTCTGTTCTTGTTTCGATTCCCCATGAACAACTTGAGGAAATTTCTTTGCCGAGTGTCTCAAATGTATGTAAGAAGCCCAAAAGAGGAGAAGATTTCAGCATTTTGCAAGCTCTTCTAAGCAAAGATATGGCTCTTATTTTCATAGCAACGGTTTCTGCATGTGGGTCGTCCGTTGCAGCCATTGACAATCTTGGGCAGATCGCCGAGTCACTTGAATATCCAAACCATTCCATAAGTATACTGGTTTCATGGATTTCTATATTCAATTTCTTTGGTCGGGTCTTCTCCGGTTTCATCTCTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTCGGTCTTACACAACTTTTCACCTGCACCGGCTTGCTCTCCATCGCTTTCCCTTATATAAATTCAGTCTATGTAGCTTCGTTGATCATTGGGTTTGGCCTTGGAGCCCAAACTCCGTTGATATTCGCCATAATCTCTGATCTTTTCGGCCTCAAACATTACTCGACACTGCTCAACTGTGGGCAACTGGCTGTCCCACTTGGATCTTACATAATGAACGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGGAAGGGCCTAACTTGCACGGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTGCAGTGACTTTGTTTGGAGCGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTCTACAAAGGCGATGTATATAAGAAATACAGAGATGACATAGGGGTTACGCAGTCGAACGTGGAATTATATTCTGCCGATGATAGGAACAATGAACACAAAAAGATAACTGATGATCGAAGTAAATAA 1803 42.93 MVSQAEINSNFLFYTLSTVSFQRPLAQLVTMGNNRGGESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVSKPQLWLMFVYIYITSNSQNFPNTAVMVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSMDLLLLLSWLPSIVCSLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNIVFSQAGYASGVAVIVVLICLPLLIAIKEELFLFKLDKQTMNPSVLVSIPHEQLEEISLPSVSNVCKKPKRGEDFSILQALLSKDMALIFIATVSACGSSVAAIDNLGQIAESLEYPNHSISILVSWISIFNFFGRVFSGFISETLMTKYKLPRPFMFGLTQLFTCTGLLSIAFPYINSVYVASLIIGFGLGAQTPLIFAIISDLFGLKHYSTLLNCGQLAVPLGSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGAMASFVLAYRTRDFYKGDVYKKYRDDIGVTQSNVELYSADDRNNEHKKITDDRSK 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1713289 1716572 + CmoCh13G002180.1 Cmo13g00218 394273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00218 600 SUPERFAMILY MFS general substrate transporter 253 558 IPR036259 -
Cmo13g00218 600 Pfam Nodulin-like 50 296 IPR010658 -
Cmo13g00218 600 Gene3D MFS general substrate transporter like domains 354 560 IPR036259 -
Cmo13g00218 600 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 34 573 - -
Cmo13g00218 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 34 573 - -
Cmo13g00218 600 SUPERFAMILY MFS general substrate transporter 33 239 IPR036259 -
Cmo13g00218 600 Pfam Major Facilitator Superfamily 358 554 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00216 Cmo-Chr13:1698204 Cmo13g00218 Cmo-Chr13:1713289 0 dispersed
Cmo13g00218 Cmo-Chr13:1713289 Cmo13g00227 Cmo-Chr13:1768272 0 dispersed
Cmo13g00223 Cmo-Chr13:1755607 Cmo13g00218 Cmo-Chr13:1713289 2.02E-12 dispersed
Cmo13g00217 Cmo-Chr13:1701738 Cmo13g00218 Cmo-Chr13:1713289 1.23E-76 tandem
Cmo13g00218 Cmo-Chr13:1713289 Cmo13g00219 Cmo-Chr13:1719451 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00218 - - cmos:111464768 1104.35