Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00229 ATGGGTGCAGAAACACCCACGAACAGGGGACCCGACGCCGCCCGGGGCGGCGGATTGCTCCAATTCGCGCTGCACGTCTTAAAAGGCCGGTGGTTCACTGTCTTCGCCACATTTCTGATCATGGCCGGCGCCGGCGCCACTTATCTCTTCGGCGTCTACTCGAAACAGATCAAATCCACGCTCGGATACGACCAGACGACACTAAATCTGATGGGTTTTTTCAAGGATCTCGGAGCCAATGTCGGTGTACTCTCCGGCTTAGTGGCGGAGGTGACACCGACATGGTTCGTCCTCCTCCTCGGCTCCGTCTTGAATTTCACCGGCTACTTCATGATCTGGCTCGCCGTCACTGGCCGGATCACAAAGCCCAAAGTCTGGCAAATGTGTCTTTATATCTGCGTTGGCGCAAATTCTCAAAACTTCGCTAATACCGGCGCGTTGGTCACTTGCATCCAGAATTTCCCCGAGAGCCGTGGCGCTATGATGGGCCTTTTAAAGGGCTTCACAGGGCTGAGCGGCGCTATTCTTACAGAGATTTATTTAGCCGTTTACGGCGAGGATGCCACCGCGTTGATCCTTCTAATTGCGTGGCTTCCGGCGGCTCTCTCCGTCGTGTTCATTTTCAATATCCGAAAGCTCAAGGCGGAGAGACAGCCAAACGAGACAAGGGTTTTTTACCATTTTCTTTATATCTCAATTGGGTTGGCGATTTTCATTATGCTTATGAATATTATTCAGAAGAAAGTGGAATTTAATCATACGGCTTATGCGTTAAGCGCCACCGTAATTTGTGCTCTGCTTTTCCTTCCTCTGTTCATCGTGATCAGAGAAGAGCTTCATATTTGGAATTCCAAGATCAACCCACCAATTCCAATCGAAAACCCAATAGAACCCAAAATTTCCATAGAAGAATCAAAGGAAATCAAGAACAATCCAGACCCAAAACCATACCCACCGCCGCCGTCCTGTTTCTCCAGCATCTGCAACAAACCAGCAAGAGGCGACGACTACACAATACTCCAAGCCCTTCTCAGCATCGACATGATGGTGCTTTTCATCGCGACATTCTGCGGCCTCGGCACAAGCTTAACCGCCGTCGACAATTTGGGGCAGATCGGAGAATCCCTCGGCTACCCATTAAAAACAGTAAAATCCTTCGTTTCATTAGTAAGCATATGGAATTACTTCGGCAGAGTATTCTCCGGCTTCGTCTCTGAAACCCTTCTCGCAAAATTCAAATTCCCAAGACCTTTAATGATGACATTGGTTCTTCTTCTATCTTGCATCGGCCAACTCCTAATCGCCTTCCCAATTCCCGGCTCCGTCTACATTGCATCGATCATCATCGGATTCTCCTTCGGCGCGCAGCTTCCGTTACTTTTCGCCATAATTTCCGAGCTCTTCGGGCTTAAATATTTCTCCACTCTGTTCAATTGCGGCCAAATCGCAAGCCCGTTGGGGTCGTATATTCTGAACGTGAAGGTCGCCGGAATGATGTACGATGCGGAGGCGTTGAAGCAGCTGAAGGAGATGGGAATGGACAGGGCGGCGGTGAAGGAATTGACCTGCATTGGGAAGCAGTGTTACAGGAAATCGTTTACGTTAATGGCGATTGTGACGTTTGTTGGGGCTCTGGTTTCGCTGGTTTTGGTGATGAGGACGAGGGAGTTTTACAGAGGAGATATTTACAAGAGGTTCAGAGAGGAAGTGAAGCAGGAGACGAGTGTGGGAGAGGCTGCCGCTGTGGAATCCAAGTGA 1758 49.6 MGAETPTNRGPDAARGGGLLQFALHVLKGRWFTVFATFLIMAGAGATYLFGVYSKQIKSTLGYDQTTLNLMGFFKDLGANVGVLSGLVAEVTPTWFVLLLGSVLNFTGYFMIWLAVTGRITKPKVWQMCLYICVGANSQNFANTGALVTCIQNFPESRGAMMGLLKGFTGLSGAILTEIYLAVYGEDATALILLIAWLPAALSVVFIFNIRKLKAERQPNETRVFYHFLYISIGLAIFIMLMNIIQKKVEFNHTAYALSATVICALLFLPLFIVIREELHIWNSKINPPIPIENPIEPKISIEESKEIKNNPDPKPYPPPPSCFSSICNKPARGDDYTILQALLSIDMMVLFIATFCGLGTSLTAVDNLGQIGESLGYPLKTVKSFVSLVSIWNYFGRVFSGFVSETLLAKFKFPRPLMMTLVLLLSCIGQLLIAFPIPGSVYIASIIIGFSFGAQLPLLFAIISELFGLKYFSTLFNCGQIASPLGSYILNVKVAGMMYDAEALKQLKEMGMDRAAVKELTCIGKQCYRKSFTLMAIVTFVGALVSLVLVMRTREFYRGDIYKRFREEVKQETSVGEAAAVESK 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1783837 1785594 - CmoCh13G002290.1 Cmo13g00229 394284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00229 585 CDD MFS_Mch1p_like 29 544 - -
Cmo13g00229 585 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 16 573 - -
Cmo13g00229 585 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 573 - -
Cmo13g00229 585 Pfam Nodulin-like 30 275 IPR010658 -
Cmo13g00229 585 Gene3D MFS general substrate transporter like domains 343 558 IPR036259 -
Cmo13g00229 585 SUPERFAMILY MFS general substrate transporter 31 558 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00210 Cmo-Chr13:1627205 Cmo13g00229 Cmo-Chr13:1783837 0 dispersed
Cmo13g00211 Cmo-Chr13:1631725 Cmo13g00229 Cmo-Chr13:1783837 0 dispersed
Cmo13g00229 Cmo-Chr13:1783837 Cmo18g00914 Cmo-Chr18:10319980 0 dispersed
Cmo20g00758 Cmo-Chr20:3808290 Cmo13g00229 Cmo-Chr13:1783837 4.63E-98 dispersed
Cmo13g00228 Cmo-Chr13:1772961 Cmo13g00229 Cmo-Chr13:1783837 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00229 - - csv:101217765 926.006