Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo13g00277 | ATGGCGCTCTATCCATCCCTACAACTCATTCGATTCCCTCCTCAAGCACTCTCCTCGTCCTCTCGCCACCTTCTCATTTCTGACCTCGGCTCCGTATCGCGCTTCTTCCGATCTCCATGGCTTTCCTCTTTGCCTCCGTCGCGGAAGTGCAGGATGATTTTATCTTCCAGGACCAAGTGTTTCTCCATGTCCACTGAGGAGGATCAGTGGAGTGAATCGGAAGCGTTGATGTCCGATGTTGACGAAGGGGGAGATCGTGAGGATGATATTGGTGTTCAGCAAGAAAGCTCTGTGGTCTCTGCTGCTTCTGCGCAGAGGATTTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATTCGTGAGTCGGTTTATGAGGTATTAGAGGTTAAAGCCAATGGTGCCGTATCTACTAGGAAGATAAACAGACGTCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTCCGGAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAAAATGCTATTTTACTTAATCTGGGATCGCTGCGAGCAATAGCTATGCCGGACTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAGGCTTTTATTGAATCATTGTTGCCACGATTGAACCCAAAAAGCATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACACAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTGAGTATGGGAACATAG | 786 | 47.96 | MALYPSLQLIRFPPQALSSSSRHLLISDLGSVSRFFRSPWLSSLPPSRKCRMILSSRTKCFSMSTEEDQWSESEALMSDVDEGGDREDDIGVQQESSVVSAASAQRISSSSPSDYLSLAIRESVYEVLEVKANGAVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVRENAILLNLGSLRAIAMPDCVLIFDYNRPGGQAFIESLLPRLNPKSMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVSMGT | 261 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 2276986 | 2284939 | - | CmoCh13G002770.1 | Cmo13g00277 | 394332 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo13g00277 | 261 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 40 | 257 | IPR039204 | - | |
| Cmo13g00277 | 261 | Gene3D | Magnesium transport protein CorA, transmembrane region | 204 | 259 | - | - | |
| Cmo13g00277 | 261 | PANTHER | MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED | 40 | 257 | - | - | |
| Cmo13g00277 | 261 | Gene3D | - | 116 | 201 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo12g00817 | Cmo-Chr12:7350047 | Cmo13g00277 | Cmo-Chr13:2276986 | 4.54E-149 | dispersed | |
| Cmo13g00275 | Cmo-Chr13:2237131 | Cmo13g00277 | Cmo-Chr13:2276986 | 0 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo13g00277 | K16075 | - | csv:101219314 | 372.859 |