Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00294 ATGTCCTCTTCCGACCCCAAATCCCGCCAACGTCCGGGTCCATGGCCGCCCGCGCCGGACTCCTCTTCAATGCCGCCGGCTTCTTGGGCCAAACGCACCGGCTTCCGTCCCAAGTTCTCTGGCGAGACCAATGCCACTGATTCCGGCAACCTCGCTCTTCCCCCGAGGTCGAAGGATCCCCATGCCCACACGGATCTTGAAGCCGGCCGTCTCCGGGGAAGTTCTGCCGTTAATGGAGAGCAGGAGAGTGTGAAGGCGGCTCAGCCGCAGTTGGAGAAGGCTAAAGATGAGTCGGTGAGGAGGAGGAGGGATTCTGATAGCTTACCGAAGGGTTCTGCTCCTGTACAGAATGGACAAACGCTGCCTCCCCCTCCGCCTTCCGAACCGGCGAATCAACCACGGCGGCCGGCTAGAAATGAGGATGTGGTGGATGTTCTGCCGCAGATTGGGGATGATGATGGATTTGTGGCCAGACACTCGCACATGAAGTACGAACTCAGAGATACGCCTGGTCTTGTCCCGATCGGTCTATATGGATTCCAGCATTATATTTCGATGTTGGCTTCGTTGATTCTTATTCCGCTTGTTATTGTTCCTGCAATGGGTGGCACTTACGAGGATACTTCAAATGTGGTATCGACGGTGCTCTTCGTGTCGGGCATCACTACCCTTTTGCATACTTCTTTCGGCTCAAGGTTACCATTGATACAAGGTCCATCATTTGTTTTCCTGGCTCCAGCATTGGCAATTATCAATTCCCCTGAGTTTCAAGGACTTAACGGGAACAATTTTAAGCACATAATGAAGGAGTTACAAGGTGCAATTATCATAGCTTCAGCTTTTCAAGCAATACTTGGATATAGTGGACTGATGTCACTGCTTTTGAGGCTGATCCATCCTGTAGTTGTGGCCCCAACCATTGCTGCTGTTGGACTTTCGTTTTATAGTTATGGTTTTCCACTAGTTGGTGCCTGTCTTGAGATTGGTGTAGTGCAGATACTGTTGTACCTCCGGAAGATATCTATTCTCGGCCATCGGATTTTTCTAATATATGCAGTTCCACTTGGAATTGTTATCACGTGGGCTTTGGCGTTTTTGCTGACTGAAGCTGGAGTTTATAGTTACAAAGGTTGTGATACAAATGTTCCTGCCTCAAATATAATATCTGATCACTGCAGAAGACATGTTTCAAGGATGAAGCATTGTCGAGTTGATACTTCTCACGCACTAAAATCTTCACCGTGGTTTAGATTTCCATATCCGTTACAGTGGGGCACTCCCGTCTTCCACTGGAAAACAGCAATTATTATGTGTGTTGTGTCTGTCATCTCATCTGTGGATTCGGTTGGTTCGTATCATGCAGCTTCATTATTGGTGGCATCCAGACCGCCATCACCTGGTGTTCTTAGTCGAGGAATTGGACTGGAAGGTCTTTGTAGTATTTTGGCTGGTCTATGGGGCACAGGAACCGGGTCTACAACTCTTACTGAAAATGTTCATACTATAGCAGTTACAAAAATGGGAAGCCGCAGAGCAGTTGAACTGGGTGCATGCATTTTGATAGTGTTATCTCTTGTAGGTAAAGTTGGGGGCCTTATTGCTTCCATTCCTGACGTCATGGTTGCTGCTCTTCTTTGCTTCATGTGGGCAATGCTTACGGCACTAGGCTTGTCAAATCTTCGATATAGTGAAGCAGGAAGCTCTCGGAATATTATCATTGTTGGATTATCATTATTTTTCTCACTTTCTGTACCAGCCTACTTTCAACAGTACGGTATCTCCCCAGGCTCCAACATGTCTGTTCCAAGTTATTTTCAGCCGTATATTGTTGCTTCCCATGGACCTTTCAACAGTAAATCGGGAGGGCTGAATTTCGTTCTCAACACATTGTTCTCTTTACACATGGTGATTGGATTCCTAGTCGCCATCATCCTTGATAACACTGTGCCCGGCAGTCGACAGGAACGTGGTGTATATGTGTGGTCTGATCCTGAGACTGCAAGGAGGGAGCCTGCAGTTACCAAAGACTATGAACTTCCATTCAGGGTTGGTCGAGTTTTCAGATGGGTGAAATGGGTCGGATTCTAA 2088 47.56 MSSSDPKSRQRPGPWPPAPDSSSMPPASWAKRTGFRPKFSGETNATDSGNLALPPRSKDPHAHTDLEAGRLRGSSAVNGEQESVKAAQPQLEKAKDESVRRRRDSDSLPKGSAPVQNGQTLPPPPPSEPANQPRRPARNEDVVDVLPQIGDDDGFVARHSHMKYELRDTPGLVPIGLYGFQHYISMLASLILIPLVIVPAMGGTYEDTSNVVSTVLFVSGITTLLHTSFGSRLPLIQGPSFVFLAPALAIINSPEFQGLNGNNFKHIMKELQGAIIIASAFQAILGYSGLMSLLLRLIHPVVVAPTIAAVGLSFYSYGFPLVGACLEIGVVQILLYLRKISILGHRIFLIYAVPLGIVITWALAFLLTEAGVYSYKGCDTNVPASNIISDHCRRHVSRMKHCRVDTSHALKSSPWFRFPYPLQWGTPVFHWKTAIIMCVVSVISSVDSVGSYHAASLLVASRPPSPGVLSRGIGLEGLCSILAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVELGACILIVLSLVGKVGGLIASIPDVMVAALLCFMWAMLTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSVPAYFQQYGISPGSNMSVPSYFQPYIVASHGPFNSKSGGLNFVLNTLFSLHMVIGFLVAIILDNTVPGSRQERGVYVWSDPETARREPAVTKDYELPFRVGRVFRWVKWVGF 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2929877 2941361 - CmoCh13G002940.1 Cmo13g00294 394349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00294 695 MobiDBLite consensus disorder prediction 89 108 - -
Cmo13g00294 695 MobiDBLite consensus disorder prediction 118 132 - -
Cmo13g00294 695 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 28 694 - -
Cmo13g00294 695 Pfam Permease family 177 588 IPR006043 GO:0016020|GO:0022857|GO:0055085
Cmo13g00294 695 MobiDBLite consensus disorder prediction 1 138 - -
Cmo13g00294 695 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 12 28 694 IPR029946 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g00294 Cmo20g00250 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00294 Cmo-Chr13:2929877 Cmo20g00250 Cmo-Chr20:1206450 3.61E-111 dispersed
Cmo04g00923 Cmo-Chr4:4646141 Cmo13g00294 Cmo-Chr13:2929877 5.87E-111 transposed
Cmo04g00924 Cmo-Chr4:4649533 Cmo13g00294 Cmo-Chr13:2929877 8.97E-39 transposed
Cmo12g00801 Cmo-Chr12:6922313 Cmo13g00294 Cmo-Chr13:2929877 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00294 - - csv:101222389 1258.82