Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo13g00317 | ATGGCTTCAACCATCATGTTCTTATTCTCCGGTGCCTCCGACCACCTACTCCACTCTCTCCCCTCCCTTATCTCCATCCTATTCTTCTCCTTCACGGCGGCCTTCACGGTGTTCTCCTTCTCTTTGTTCATCCTCCGCCTTAGACCCTGCTGCAACTGCCCCATCTGCCACTCCTACCTCTCCTCCACATGGCTCTCCTCCTTCCCCAACTTATCCGATTGGTACGCCCACCTCCTCTCCCACTCCCCCACCGCCACCATCACCATCCACGTCCTCTCCAACATCCTCACCGCCAACCCCGACAACGTCCACCACATCCTCAAAACCAACTTCCACAACTACCCAAAAGGCAAGCCCTTCTCCTCCATCCTCGGCGACCTCCTCGGCCAAGGCATCTTCAACGTCGACGGCCACTCCTGGACCTTCCAACGCAAAATGGCTAGCTTGGAGCTCGGCAGCCTCTCCGTCCGCTCCCACGCCTTCCACATCCTAACCTCCCAGATTCAAACAAGGCTGCTTCCGGTCCTGTGTTCGAATCACGGCATGCTGGATTTACAGGATATTTTTAAACGATTTTCTTTTGATAATATTTGTCGATTCTCCTTTGGGTTGGACCCTGGCTGTTTGAGCTTGTCTTTGCCTATTTCGGAGTTTGCTGTTGCCTTTGACTTGGCGTCTAAATTGTCGGCGGAGAGGGCTATTACGCCTTACCCTGTTATGTGGAGGATTAAGCGGCTGTTTGGATTTGGGTCGGAGAGGAAGCTTAGGGATGCTATTAAAATGGTGGATGATCTTGCCATGGAAGTCATACGCCAACGCCGGGAAATTGGATTCTCTCATCGGAATGATCTTCTCTCTAGATTCATGGCTTCCGTTGATGATGACAGATATCTTAGAGACATTGTTGTCAGCTTCCTCCTCGCCGGCCGGGACACGGTGGCGTCGGCTTTGACTAGCTTCTTCTGGCTACTATCTCAAAACCCAGAAGTGGAGGACGAGATTCTCGCCGAGTCGGATCGGGTCATGGGACCCGACCCGGACGCGGTACCCAGTTTCGACAACCTTAAAGACATGCAATATCTTCACGCAGCGGTGTACGAGAATCTGCGCCTCTTTCCACCGGTTCAGTTCGACTCCAAGTTCGCTGAGGAAGACGATATCTTGCCGGACGGCACGTTTGTTCAGAAGGGTACAAGGGTAACTTACCACCCCTACGCCATGGGTCGGATGGACCGGATTTGGGGACCCGATTGTCTCCAGTTTAAACCGGAGAGGTGGCTCAAGAATGGAAGCTTTGCACCTGTAAACCCGTTTAAATTCCCTGTTTTTCAGGCCGGTTTACGGGTTTGTTTGGGGAAGGAGTTAGCGGTGATGGACGTGAAATGTACTGTGGTGGTTTTGATTCGGAAGTTTAAGATCCGGTTGGTTGGAACTGACCGGGTTGCCCGGTTTGCTCCCGGTCTGACGGCTAGCTGGAGAGGTGGGTTGCCGGTTCGAATTGAACAAAGAACCACCAGTTAG | 1521 | 52.73 | MASTIMFLFSGASDHLLHSLPSLISILFFSFTAAFTVFSFSLFILRLRPCCNCPICHSYLSSTWLSSFPNLSDWYAHLLSHSPTATITIHVLSNILTANPDNVHHILKTNFHNYPKGKPFSSILGDLLGQGIFNVDGHSWTFQRKMASLELGSLSVRSHAFHILTSQIQTRLLPVLCSNHGMLDLQDIFKRFSFDNICRFSFGLDPGCLSLSLPISEFAVAFDLASKLSAERAITPYPVMWRIKRLFGFGSERKLRDAIKMVDDLAMEVIRQRREIGFSHRNDLLSRFMASVDDDRYLRDIVVSFLLAGRDTVASALTSFFWLLSQNPEVEDEILAESDRVMGPDPDAVPSFDNLKDMQYLHAAVYENLRLFPPVQFDSKFAEEDDILPDGTFVQKGTRVTYHPYAMGRMDRIWGPDCLQFKPERWLKNGSFAPVNPFKFPVFQAGLRVCLGKELAVMDVKCTVVVLIRKFKIRLVGTDRVARFAPGLTASWRGGLPVRIEQRTTS | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 3460255 | 3462618 | - | CmoCh13G003170.1 | Cmo13g00317 | 394372 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo13g00317 | 506 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | PANTHER | CYTOCHROME P450 94C1 | 26 | 501 | - | - | |
Cmo13g00317 | 506 | SUPERFAMILY | Cytochrome P450 | 60 | 503 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | Pfam | Cytochrome P450 | 94 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | Gene3D | Cytochrome P450 | 59 | 506 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | PANTHER | CYTOCHROME P450 | 26 | 501 | - | - | |
Cmo13g00317 | 506 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g00317 | 506 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00465 | Cmo-Chr6:2251502 | Cmo13g00317 | Cmo-Chr13:3460255 | 0 | dispersed | |
Cmo11g00039 | Cmo-Chr11:163670 | Cmo13g00317 | Cmo-Chr13:3460255 | 3.65E-133 | dispersed | |
Cmo13g00317 | Cmo-Chr13:3460255 | Cmo14g00504 | Cmo-Chr14:2496929 | 4.70E-121 | dispersed | |
Cmo13g00317 | Cmo-Chr13:3460255 | Cmo10g00063 | Cmo-Chr10:287927 | 4.20E-139 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo13g00317 | K20624 | - | csv:101207724 | 816.609 |