Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00353 ATGAACATTCTTACTAATTTCATCTTTATGTTGTTCGGGTTCTTTTGGTTAATATCACCGGTCATTGCTGTCAAAAAGTCCTATATTGTGTTATTAGGATCTCATTCACATGGGTTAGAGGTATCAGCAGTAGATCTTCAAAGAGCGGTCGATTCCCATCACAAATTGCTCGGATCCTTCTTGGGGAGTTCTGAAAAGGCAAAAGATGCAATTTTTTACTCGTATAAGAACCACATCAATGGGTTTGCAGCCATTCTAGAGGAGGAGGAGGCCACCAAACTTGCAAAGCACCCAGAAGTAGCAGCAGTGCTGCCAAACAAAGCTAAAGAGTTACACACAACTCATTCATGGGAGTCCATGCATTTGGAGAAGAATGATGTTATTCCTTCTTCTTCTCCTTGGAGGAAGGCTAGATTTGGAGAAGATGTTATTATCGCCAATCTTGACTCAGGTGTATGGCCGGAGTCCAAGAGTTTTGGAGAACAAGGCATAGTTGGAGGCGTGCCATCGAGGTGGAAAGGAGGCTGCATGGATAAAACCCCTGATGGAGTGCCTTGCAACCGGAAATTAATCGGAGCAAAGTATTTCAACCAAGGGGCACTCGCGTACTTGAAATCCCAAAATTTAATGGAGGAACTCCCATTGATCGTCAACTCCACGCGCGACTACAAAGGTCATGGATCCCACACGCTGTCGACGGCTGGCGGCAGTTATGTCTCCAACGTTAGCGTATTTGGGTCCGGTATCGGAACTGCCAAGGGCGGCTCTCCCAAGGCCCGCGTTGCTGCCTATAAGGTCTGCTGGCCGCTTCCTAACATTGGTGGCTGCTTTGACGCCGACGTTGCCGAGGCATTTGATCATGCCATCCACGACGGCGTCGATGTCCTTTCGCTTTCCATCGGCAGTCCACCAGCCGAATACTATGATGATATCATTGCCATTGGTTCCTTTCATGCACTAAAGAAAGGAATCCCCGTTGTGTGCTCCGCCGGAAACTCCGGCCCGAGCATGGCGACTGCTTCTAATATTGCTCCGTGGATTTTGACAGTCGGGGCTAGCACTTTGGACCGTGAATTTCAGGCGCCCATTGAACTTGGAAACGGACAACGCTTCACGGGATCGAGCCTTTCGAATCCATTAGCGGGAAGAAAGCTATACCCATTGATAACGGGAGCTCAGGTGAAAGCGACGACTGCCTTTGCCCAGGACTCCATTCTCTGCAAACCGGAAACCTTGGATCATTCTAAAGTGAAAGGGAAGATCTTGGTTTGCTTGAGAGGGGGTTCTTCGAGAATTGACAAAGGAATGCAAGCCCTCCTCGCCGGTGCTGTCGGAATGATTCTCTGCAATGATAGGCTTAGTGGATTTGAAATCATGGCCGATCTCCATGTTCTTCCAACTTCCCATATCAATTACAATGACGGCCAAGCTGTTTTCTCGTACATCTATTCCACGAAGTAA 1461 48.12 MNILTNFIFMLFGFFWLISPVIAVKKSYIVLLGSHSHGLEVSAVDLQRAVDSHHKLLGSFLGSSEKAKDAIFYSYKNHINGFAAILEEEEATKLAKHPEVAAVLPNKAKELHTTHSWESMHLEKNDVIPSSSPWRKARFGEDVIIANLDSGVWPESKSFGEQGIVGGVPSRWKGGCMDKTPDGVPCNRKLIGAKYFNQGALAYLKSQNLMEELPLIVNSTRDYKGHGSHTLSTAGGSYVSNVSVFGSGIGTAKGGSPKARVAAYKVCWPLPNIGGCFDADVAEAFDHAIHDGVDVLSLSIGSPPAEYYDDIIAIGSFHALKKGIPVVCSAGNSGPSMATASNIAPWILTVGASTLDREFQAPIELGNGQRFTGSSLSNPLAGRKLYPLITGAQVKATTAFAQDSILCKPETLDHSKVKGKILVCLRGGSSRIDKGMQALLAGAVGMILCNDRLSGFEIMADLHVLPTSHINYNDGQAVFSYIYSTK 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4529577 4531656 + CmoCh13G003530.1 Cmo13g00353 394408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00353 486 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 20 484 - -
Cmo13g00353 486 Gene3D Peptidase S8/S53 domain 142 355 IPR036852 GO:0004252|GO:0006508
Cmo13g00353 486 CDD Peptidases_S8_3 109 399 IPR034197 -
Cmo13g00353 486 Gene3D - 356 486 - -
Cmo13g00353 486 Pfam Subtilase family 141 366 IPR000209 GO:0006508|GO:0008236
Cmo13g00353 486 ProSiteProfiles Serine proteases, subtilase domain profile. 116 486 - -
Cmo13g00353 486 Pfam PA domain 407 477 IPR003137 -
Cmo13g00353 486 Pfam Peptidase inhibitor I9 27 111 IPR010259 -
Cmo13g00353 486 SUPERFAMILY Protease propeptides/inhibitors 26 106 - -
Cmo13g00353 486 SUPERFAMILY Subtilisin-like 127 379 IPR036852 GO:0004252|GO:0006508
Cmo13g00353 486 CDD PA_subtilisin_like 363 486 - -
Cmo13g00353 486 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 112 IPR037045 -
Cmo13g00353 486 SUPERFAMILY PA domain 414 478 IPR046450 -
Cmo13g00353 486 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 484 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00353 Cmo-Chr13:4529577 Cmo13g00358 Cmo-Chr13:4600597 0 dispersed
Cmo13g00352 Cmo-Chr13:4498574 Cmo13g00353 Cmo-Chr13:4529577 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00353 - - cmos:111434035 982.245