Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00358 TCTCACTCACATGGGTTAGAGGTATCAGCAGTAGATCTTCAAAGAGTGGTCGATTCCCATCACAAATTGCTCGGATCCTTGTTGGGGAGTTCTGAAAAGGCCAAAGATGCCATTTTTCACTCATATAAGAACCATATAAATGGGTTTGCAGCAATTCTAGAGGAGGAGGAGGCCACCAAGCTTGCAAAGCACCCAGAAGTAGCAGCAGTGTTGCCAAACAAAGCCAAAGAGTTACACACAACTCATTCATGGGAGTTCATGCATTTGGAGAAGAATGGTGTTGTTCTCCCTTTTTCTCCTTGGAGGAAGGCTAGATTTGGAAGAGATGTTATTATTGCCAATCTCGACACCGGTGTATGGCCGGAGTCCAAGAGTTTTGGAGAACAGGGCATAGTTGGAGGTGTGCCATCGAGGTGGAAAGGAGGCTGCATGGATAAAACCCCTGATGCAGTGCCTTGTAACAGGAAATTAATCGGAGCAAAGTATTTCAATCAGGGACTAATCGCGTACTTGAAATCCCACAATTTAACAGATGAACTCTCATTGATCGTCAACTCTACACGCGACTACGTAGGTCATGGAACCCACACGCTATCGACGGCCGGCGGCAGCTATGTCTCCGGCGTCAGCGTATTTGGGTCCGGTATCGGGACTGCCAAGGGCGGCTCTCCCAAGGCCCGCGTCGCTGCCTATAAGGTCTGCTGGCCGTTCCATAACAGCGGCGGCTGCTACGACATCGACGTTGTTGACGGATTTGATCAAGCGATCCACGACGGCGTCGATGTCCTTTCGCTTTCCATCGGCAGTCCACCAGCCGAATACTATGATGATACCATCGCCATTGCTTCCTTTCTTGCAATCAAGAAAGGAATCCCCGTGGTGTGCTCTGCCGGCAACTCCGGCCCGAGCATGGCGAGTGCTTCTAATATTGCTCCATGGATTTTGACGGGGTCAAGCCTTTCGAGACCATTAGCAAGAAGAAAGCTATACCCATTGATAACCGGAGCTCAGGCGAAAGCAACGACCGCCTCTGCCGACGACGCCATGCTCTGCAAGCCAAAAACTTTGGATCATTCTAAAGTGAATGGGAAGATCTTGGTTTGCTTGACAGGGGGCTCTTCGAGAATTGACAAAGGAATGCAAGCCGTCCTCGCCGGTGCTGTCGGAATGATTCTTTGCAACGATAGGTTTAGTGGATTTAAAATCATCGCCGATCTCCATGTTCTTCCAGCTTCCCATATCAATTACAATGACGGCCAAGCTGTTTTCTCGTACATCAATTCTTGGAAAAATCCGATGGGATATTTGATTCCGCCGTCGTCCAAAGTTAATACCAAACCTTCTCCGACAATGGCGGCTTTCTCATCCAGAGGGCCCAACATGGTTTCACCGGAAATTATCAAGCCGGACGTGACAGCGCCGGGAGTGAACATAATCGCGGCATTCTCCGGCGCTGTGAGCCCAACAAGGGAGCCATTCGACAACAGAACAGTTCCATACATAACAATGTCAGGGACCTCCATGTCCTGTCCCCACGTCTCCGGCATTGTCGGCCTCCTCAAAGCTCTCCACCCCGAATGGAGCCCTGCCGCCATCAAATCCGCCATAATGACCTCTGCCATAATTAGCGACAACACAATGAACCTCATCCTCGATGGCGGCTCCCCTATGTTTGCTCCAGCCACCCCCTTCATATATGGGTCAGGGCACATCCACCCCACTGGCGCCATCGACCCCGGCCTCGTCTACGACCTCTCCCCCAACGATTACTTAGAATTCCTCTGTGCCAGTGGCTACAAGGAGAAGAACATTCGAGTATTCGCCGATGAAAATTTCAAGTGCCCTATTTCTTGTTCTATTTTTAACTTTAATTACCCTTCCATTGGGGTTCAAAACTTGACTGGGAGTGTCACCCTTAAAAGAAGGCTGAAGAATGTTGGCAGGCCGGGGGTTTATAGAGTCAGAGTTCGACAGCCGGAAGGAGTTAAGGTTTCAGTGAAGCCAAGGGTTCTGAAGTTTTGGAAGATTGGAGAGGAGAAGAGGTTTGAATTGACAATGACCGGAGCTATGGCGGAGGGTCAAATTGGTTATGGTACGCTAATTTGGACCGACGGCAAGCACTTTGTTAGGAGTCCAATT 2139 49.79 SHSHGLEVSAVDLQRVVDSHHKLLGSLLGSSEKAKDAIFHSYKNHINGFAAILEEEEATKLAKHPEVAAVLPNKAKELHTTHSWEFMHLEKNGVVLPFSPWRKARFGRDVIIANLDTGVWPESKSFGEQGIVGGVPSRWKGGCMDKTPDAVPCNRKLIGAKYFNQGLIAYLKSHNLTDELSLIVNSTRDYVGHGTHTLSTAGGSYVSGVSVFGSGIGTAKGGSPKARVAAYKVCWPFHNSGGCYDIDVVDGFDQAIHDGVDVLSLSIGSPPAEYYDDTIAIASFLAIKKGIPVVCSAGNSGPSMASASNIAPWILTGSSLSRPLARRKLYPLITGAQAKATTASADDAMLCKPKTLDHSKVNGKILVCLTGGSSRIDKGMQAVLAGAVGMILCNDRFSGFKIIADLHVLPASHINYNDGQAVFSYINSWKNPMGYLIPPSSKVNTKPSPTMAAFSSRGPNMVSPEIIKPDVTAPGVNIIAAFSGAVSPTREPFDNRTVPYITMSGTSMSCPHVSGIVGLLKALHPEWSPAAIKSAIMTSAIISDNTMNLILDGGSPMFAPATPFIYGSGHIHPTGAIDPGLVYDLSPNDYLEFLCASGYKEKNIRVFADENFKCPISCSIFNFNYPSIGVQNLTGSVTLKRRLKNVGRPGVYRVRVRQPEGVKVSVKPRVLKFWKIGEEKRFELTMTGAMAEGQIGYGTLIWTDGKHFVRSPI 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4600597 4604389 + CmoCh13G003580.1 Cmo13g00358 394413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00358 713 ProSitePatterns Serine proteases, subtilase family, serine active site. 505 515 IPR023828 -
Cmo13g00358 713 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 79 IPR037045 -
Cmo13g00358 713 SUPERFAMILY PA domain 358 429 IPR046450 -
Cmo13g00358 713 Gene3D Peptidase S8/S53 domain 109 316 IPR036852 GO:0004252|GO:0006508
Cmo13g00358 713 Gene3D Peptidase S8/S53 domain 445 590 IPR036852 GO:0004252|GO:0006508
Cmo13g00358 713 PANTHER PEPTIDASE S8 1 713 - -
Cmo13g00358 713 Pfam Subtilase family 107 545 IPR000209 GO:0006508|GO:0008236
Cmo13g00358 713 PANTHER BNAC02G33520D PROTEIN 1 713 - -
Cmo13g00358 713 Pfam Fibronectin type-III domain 622 713 IPR041469 -
Cmo13g00358 713 SUPERFAMILY Subtilisin-like 78 581 IPR036852 GO:0004252|GO:0006508
Cmo13g00358 713 Gene3D - 594 713 - -
Cmo13g00358 713 Gene3D - 325 444 - -
Cmo13g00358 713 CDD Peptidases_S8_3 76 541 IPR034197 -
Cmo13g00358 713 Pfam Peptidase inhibitor I9 14 78 IPR010259 -
Cmo13g00358 713 Pfam PA domain 347 421 IPR003137 -
Cmo13g00358 713 ProSiteProfiles Serine proteases, subtilase domain profile. 83 577 - -
Cmo13g00358 713 PRINTS Subtilisin serine protease family (S8) signature 107 126 IPR015500 -
Cmo13g00358 713 PRINTS Subtilisin serine protease family (S8) signature 189 202 IPR015500 -
Cmo13g00358 713 PRINTS Subtilisin serine protease family (S8) signature 504 520 IPR015500 -
Cmo13g00358 713 CDD PA_subtilisin_like 315 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00351 Cmo-Chr13:4481971 Cmo13g00358 Cmo-Chr13:4600597 0 dispersed
Cmo13g00352 Cmo-Chr13:4498574 Cmo13g00358 Cmo-Chr13:4600597 0 dispersed
Cmo13g00353 Cmo-Chr13:4529577 Cmo13g00358 Cmo-Chr13:4600597 0 dispersed
Cmo13g00354 Cmo-Chr13:4540870 Cmo13g00358 Cmo-Chr13:4600597 3.41E-08 dispersed
Cmo13g00358 Cmo-Chr13:4600597 Cmo19g00850 Cmo-Chr19:8248897 0 dispersed
Cmo13g00355 Cmo-Chr13:4541733 Cmo13g00358 Cmo-Chr13:4600597 2.54E-12 proximal
Cmo13g00356 Cmo-Chr13:4583592 Cmo13g00358 Cmo-Chr13:4600597 8.31E-44 proximal
Cmo13g00358 Cmo-Chr13:4600597 Cmo13g00363 Cmo-Chr13:4656593 0 proximal
Cmo13g00357 Cmo-Chr13:4585035 Cmo13g00358 Cmo-Chr13:4600597 2.96E-32 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00358 - - cmos:111434037 1400.19