Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00363 ATGCATTTGGAGAAGAATGGTTTTATTTTCCCTTTTTCTCCTTGGAGGAAGGCTAGATTTGGAAAGGATGTTATTATTGCCAATCTCGACACCGGTGTATGGCCGGAGTCCAAGAGTTTTGGAGAACAGGGCATAACTGGAGGTGTGCCCTCGAGGTGGAAAGGAGGCTGCATGGATAAAACCCCTGATGCAGTGCCTTGTAACAAGAAATTAATCGGAGCAAAGTATTTCAATCAGGGGCTAATCGCGTACTTGAAATCCCACAATTTAACGGATGAACTCCCATTGATCGTCAACTCCACGCGCGACTACGTAGGTCATGGAACCCACACGCTATCGACGGCCGGCGGCAGCTATGTCTCTGGCGTCAGCGTATTTGGGTCTGGTATCGGAACTGCCAAGGGCGGCTCTCCCAAGGCCCGCGTCGCTGCCTATAAGGTCTGCTGGCCGTTCCGCAACGGTGGCGGCTGCTACGACGCCGACATTTTTGACGGATTTGATCAAGCCATCCACGACGGCGTCGATGTCCTTTCGCTTTCCATCGGCAGTCCACCAGATGAATACTATGATGATACCATCGCCATTGCTTCCTTTCATGCACTGAAGAAAGGAATCCCCGTGGTGTGCTCTGCCGGCAACTCAGGCCCGAGCATGGCGACTGCTACTAATATTGCTCCGTGGATTTTGACGGTCGGGGCTAGCACTTTGGACCGTGAATTTCAAGCCCCCATTGAGCTTGGAAACGGGCAACGCTTCTGGGGGTTGAGCCTTTCGAGACCATTAGCAAGAAGAAAGCTATACCCATTGATAACCGGAGCTCAGGCGAAAGCAACGACCACCTCTGCCGACGATGCCATGCTCTGCAAGCCGAAAACTTTGGATCATTCTAAAGTGAATGGGAAGATCTTGGTTTGCTTGACAGGGGGCTCTTCAAGAATTGACAAAGGAATGCAAGCTGTCCTCGCCGGTGCTGTCGGAATGATTCTCTGCAACGATAGGTTTAGTGGATTTAAAATCATTGCCGATCTCCATGTTCTTCCAGCTTCCCATATCAGTTACAACGACGGTCAAGCTATTTCCTCGTACATTAATTCCAGGAAAAATCCGATGGGATATTTGATCCCACCGTCGTCCAAAGTTAATACCAAACCTTCTCCGACCATGGCGGCTTTCTCATCCAGAGGACCCAACATAGTTTCTCCGGAAATTATCAAGCCGGACGTGACAGCGCCGGGAGTGGACATAATCGCGGCATTCTCCGGCGCCGTGAGCCCAACAGGGGAGCCATTCGACAACAGAACAGTTCCATACATAACAATGTCAGGGACTTCCATGTCCTGTCCCCATGTCTCCGGCATTGTCGGCCTCCTCAAAGCTCTCCACCCCCAATGGAGCCCCGCCGCCATCAAATCCGCCATAATGACCTCTGCCACAATTAGCGACAACACAATGAACCTCATCCTCGACGGCGGCTCCCCTATCTTCGCTCCAGCCACCCCCTTCATATATGGGTCAGGGCACATCCACCCCATTGGTGCCATCGACCCCGGCCTCGTCTACGACCTCTCCCCCAACGATTACTTAGAATTCCTCTGCGCCAGCGGCTACAAGGAGAAGAACATTCGAGTATTCGCCGAGGAAAATTACAAGTGCCCTGTTTCTGGTTCTATTTTAAACTTTAATTACCCTTCCATTGGGGTTCAGAACTTGACTGGATGTGTCACCCTTACTAGAAGGTTGAAGAATGTTGGCAGGCCGGGAGTTTATAGAGTCAGAGTTCGACGGCCGAAAGGAGTTAAGGTTTTAGTGAAGCCAAGAGTTCTGAAGTTTCGAAAGATTGGGGAGGAGAAGAGGTTTGAATTGACGATGACCGGAGTTGTGGCGGAGGGTCAAATTGGTTATGGTACGCTAATTTGGACCGACGGCAAACACTTTGTTAAGAGTCCAATTGTAGTTTCTTCTGGCTTTTTTTGA 1974 50.56 MHLEKNGFIFPFSPWRKARFGKDVIIANLDTGVWPESKSFGEQGITGGVPSRWKGGCMDKTPDAVPCNKKLIGAKYFNQGLIAYLKSHNLTDELPLIVNSTRDYVGHGTHTLSTAGGSYVSGVSVFGSGIGTAKGGSPKARVAAYKVCWPFRNGGGCYDADIFDGFDQAIHDGVDVLSLSIGSPPDEYYDDTIAIASFHALKKGIPVVCSAGNSGPSMATATNIAPWILTVGASTLDREFQAPIELGNGQRFWGLSLSRPLARRKLYPLITGAQAKATTTSADDAMLCKPKTLDHSKVNGKILVCLTGGSSRIDKGMQAVLAGAVGMILCNDRFSGFKIIADLHVLPASHISYNDGQAISSYINSRKNPMGYLIPPSSKVNTKPSPTMAAFSSRGPNIVSPEIIKPDVTAPGVDIIAAFSGAVSPTGEPFDNRTVPYITMSGTSMSCPHVSGIVGLLKALHPQWSPAAIKSAIMTSATISDNTMNLILDGGSPIFAPATPFIYGSGHIHPIGAIDPGLVYDLSPNDYLEFLCASGYKEKNIRVFAEENYKCPVSGSILNFNYPSIGVQNLTGCVTLTRRLKNVGRPGVYRVRVRRPKGVKVLVKPRVLKFRKIGEEKRFELTMTGVVAEGQIGYGTLIWTDGKHFVKSPIVVSSGFF 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4656593 4659259 - CmoCh13G003630.1 Cmo13g00363 394418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00363 657 PRINTS Subtilisin serine protease family (S8) signature 21 40 IPR015500 -
Cmo13g00363 657 PRINTS Subtilisin serine protease family (S8) signature 441 457 IPR015500 -
Cmo13g00363 657 PRINTS Subtilisin serine protease family (S8) signature 103 116 IPR015500 -
Cmo13g00363 657 ProSitePatterns Serine proteases, subtilase family, serine active site. 442 452 IPR023828 -
Cmo13g00363 657 SUPERFAMILY PA domain 295 367 IPR046450 -
Cmo13g00363 657 CDD PA_subtilisin_like 244 373 - -
Cmo13g00363 657 Gene3D Peptidase S8/S53 domain 23 527 IPR036852 GO:0004252|GO:0006508
Cmo13g00363 657 ProSiteProfiles Serine proteases, subtilase domain profile. 1 514 - -
Cmo13g00363 657 Pfam Subtilase family 21 483 IPR000209 GO:0006508|GO:0008236
Cmo13g00363 657 Pfam PA domain 284 359 IPR003137 -
Cmo13g00363 657 CDD Peptidases_S8_3 9 478 IPR034197 -
Cmo13g00363 657 Pfam Fibronectin type-III domain 559 652 IPR041469 -
Cmo13g00363 657 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 12 655 IPR045051 -
Cmo13g00363 657 SUPERFAMILY Subtilisin-like 15 518 IPR036852 GO:0004252|GO:0006508
Cmo13g00363 657 Gene3D - 531 655 - -
Cmo13g00363 657 Gene3D - 237 381 - -
Cmo13g00363 657 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 12 655 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00363 Cmo-Chr13:4656593 Cmo19g00850 Cmo-Chr19:8248897 0 dispersed
Cmo13g00358 Cmo-Chr13:4600597 Cmo13g00363 Cmo-Chr13:4656593 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00363 - - cmos:111434037 1196.8