Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00470 ATGGCATCCTCCACTTCACTTCTCAAGCTCATCTCAATCTTCCTCTTTCTCATCTCTTTTCTCACAACCCAAGTTGTTTCACAATCTAATCAATGTGAAACAACAACAAATTCTTGCACCAATAAAGACAAAGCAACACGTCTTAAAATCATTGCCATTTTCTCGATCCTCATTGCGAGCGTCATCGGCGTTTGCTCCCCGCTCTTCTCTCAATCCATCCCGATGTTGCACCCTGATAGAAACACGTTCATCATCCTTAAAGCCTTTGCATCTGGCATCATTCTCGCCACCGGTTTCATGCATGTTTTGCCTGATTCTTTCGATATGCTTTGGTCTAATTGTCTCCAGGAAAACCCGTGGCATAAGTTTCCCTTTTCGGGTTTTCTTGCCATGATGTCTGCCATTTTCACTCTCATGGTCGATTCCGTGGCTACTAGTTTGTATACTAAGAAACATACCGAAGTTATGCCTGAGAGTCGAGAAGTCGGTCATCATGAGTTGCCTGTAGTCAGCGGTGGCCATTTTCATGGCCACCATCATAGAGACATCAAAGAACTCAATGTTGGTTCTCAACTACTACGTTATCGAGTTATTGCCATGGTTTTGGAATTGGGAATTGTTGTCCATTCCGTTGTGATAGGACTTTCACTTGGAGCAACAAATGATACTTGCACAATCAAAGGCCTAGTGGCTGCTCTTTGTTTCCATCAAATGTTTGAAGGGATGGGTCTTGGAGGCTGTATTCTTCAGGCAGAATACAAGTGGATGAAGAAGGCAATAATGGCATTCTTTTTCTCAGTGACAACGCCATTTGGGATAGCTCTTGGAATAGGGTTGTCCAAGACATACAAAGAAAACAGCCCAGCTGCGCTCATCACTGTCGGGTTGCTGAATGCTTCTTCAGCTGGCTTGCTCATCTACATGGCTTTGGTGGATCTTCTGTCGGCTGACTTTATGGGACCAAAGCTGCAAGGCAGCATCAAACTCCAAGTCAAATCCTATGTAGCTGTGCTCTTGGGAGCTGGTGGCATGTCCTTAATGGCTAAGTGGGCTTGA 1056 44.7 MASSTSLLKLISIFLFLISFLTTQVVSQSNQCETTTNSCTNKDKATRLKIIAIFSILIASVIGVCSPLFSQSIPMLHPDRNTFIILKAFASGIILATGFMHVLPDSFDMLWSNCLQENPWHKFPFSGFLAMMSAIFTLMVDSVATSLYTKKHTEVMPESREVGHHELPVVSGGHFHGHHHRDIKELNVGSQLLRYRVIAMVLELGIVVHSVVIGLSLGATNDTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKWMKKAIMAFFFSVTTPFGIALGIGLSKTYKENSPAALITVGLLNASSAGLLIYMALVDLLSADFMGPKLQGSIKLQVKSYVAVLLGAGGMSLMAKWA 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5758732 5761265 + CmoCh13G004700.1 Cmo13g00470 394525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00470 351 TIGRFAM zip: ZIP zinc/iron transport family 35 351 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cmo13g00470 351 PANTHER ZINC/IRON TRANSPORTER 14 351 - -
Cmo13g00470 351 Pfam ZIP Zinc transporter 48 348 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cmo13g00470 351 PANTHER ZINC TRANSPORTER 10-RELATED 14 351 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01273 Cmo-Chr3:9694855 Cmo13g00470 Cmo-Chr13:5758732 1.53E-138 dispersed
Cmo12g00579 Cmo-Chr12:3584802 Cmo13g00470 Cmo-Chr13:5758732 2.05E-30 dispersed
Cmo13g00470 Cmo-Chr13:5758732 Cmo19g01145 Cmo-Chr19:9642448 2.19E-101 dispersed
Cmo13g00470 Cmo-Chr13:5758732 Cmo18g00524 Cmo-Chr18:3822705 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00470 K14709 - csv:101221552 588.956