Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00527 ATGGACAATGGTGAAATTGAGAGCGGGGAAGAGGAGTTTCATGGGCAGAGGGGAAGGAAGTACCGACCTGTGGAAGCTCATGATCGTGCTGTTCTTGAAATGTCTTCTATGGATCCGGGGGCATCATCTTCTTCGTCCTCCGTTCCCCCCATTTCTCTGAAGAATGTAAAAGTGGATTCTCAGACGGGCACTGAAGCAGATGGGAATTCTCCTACTCGTATTGAAGTTGATGGCCCCCAGCGAGAATCCAAGCTGGAGTTTTTTGGTTTTGATTCTCTTGTCAATATTCTTGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCACCTACTAGTCCTCGAGATGGTGAGAACATTTCTATCACTCAAGGATTGCCAAAGACCACTGATGTCAAATCGGGTACATTGATGGGTGTATTTATCCCATGCTTACAGAACATATTGGGAATCATTTACTTTATTCGATTTACTTGGATTGTTGGCATGGCTGGTATTGGTGAGTCATTAGTGCTGGTGTCGTTTTGTGGTTTATGTACGTTCTTGACTTCGATCTCACTAAGTGCTATTGCAACTAATGGTGCAATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTCGGAAATGCAGTTGCTGGTGCTCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGAATGCTGTACCAGCTGCAGGGCTATTCAGAGAGACTGTAACAAAAGTTAATGGAACAACTGTTGCAGCACCAATACAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATTGTGACGATTCTTCTGTGCTTCATTGTATTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTGGTTAGCATATTTCTTGGAATTTTTGTGGCAAGAAAAAACGACCCTTCAGATGGCATCACAGGATTGAGTTTGGAATCTTTTAAAGAAAATTGGAGTTCAGATTATCAGATGACGAACAGTGCTGGAATTCCTGATCCTTTAGGAAAAGTCTATTGGAATTTCAATGCATTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGATCAGCTTCACTGAAGGATACTCAGCGTTCAATTCCTATTGGAACATTGGCTGCAACTCTGACAACAACTGCATTATATCTGGTCTCTGTGTTGTTGTTTGGAGCACTGGCAACTAGAGAGAAATTGTTGACGGACAGGCTTCTTACTGCTACGGTTGCTTGGCCTTTCCCAGCACTTATTTATGTTGGAATTATTTTATCAACCCTTGGAGCTGCCCTTCAGAGTCTGACAGGAGCCCCTCGCTTACTAGCAGCCATAGCCAATGATGATATATTGCCTATTCTAAACTATTTTAAAGTAGCAGATGGCAGTGAGCCATACTTTGCAACCCTCTTTACTGCATTTCTCTGCATCGGATGTGTGATAATTGGGAATCTTGATCTTATCACACCAACTGTAACCATGTTTTTCCTACTTTGTTATGCTGGTGTGAACTTATCCTGCTTCCTTTTGGACCTACTAGACGCTCCCAGTTGGCGTCCACGCTGGAGATTCCATCATTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCGTGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTACTATATTATTATGTATGCCTTAGAGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTTCGCAGTCTTCGTTCGCTTGGAGCTAGCCAAGTCCACCCAAAGAATTGGTATCCCATTCCCTTGATATTTTGCCGGCCATGGGGAAAGCTGCCAGAAAATGTACCCTGTCACCCTAAACTTGCAGATTTTGCAAACTGCATGAAGAAAAAAGGCCGTGGAATGTCCATATTTGTCTCCATTCTAGATGGAGATTACCATGAACGGGTTGAAGATGCAAAATCTGCCTGCAAGCAGCTTGCTACATATATTGATTACAAACGCTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCACAATGTCTGAAGGTTTCAGGGGGATCGTTCAGACGATGGGTCTCGGAAATCTCAAGCCAAATATTGTAGTGATGCGATATCCAGAAATATGGCGTCGTGAAAATCTAATAGAAATTCCGACTACTTTTGTTGGAATAATTAACGACTGCATTGATGCTAACAAAGCAGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATTTCAGAGGCAGTATGGAACTATCGACTTGTACTGGATTGTGAGAGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGACCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATTGCAGAGGAGGATTCCGACGCGGAGGGCCTCAAAGCTGATGTCAAAAAGTTTTTGTATGATCTTCGGATGCAAGCTGAGGTGATCGTTATAACGATAAAATCATGGGACACGCAAGTGGAGGGCGCGCAACCAGATGAATCGATGGAAGCCTTCACTGCTGCTCAAGGGAGGATTGCTAGTTATTTAGGTGAAATGAAGGCAGCAGCTAAGAGCAGAGGTACCACACTCATGGCTGATGGGAAGCCTGTCAGTGTGAATGAGCAGCAGGTTGGGAAGTTTCTAAATACAACTCTCAAGTTGAACTCGACGATTCTGAGATACTCGAGGATGGCTGCTGTCGTGCTCGTTAGCCTCCCGCCACCTCCTGTCGACCATCCTGCATACTTCTATATGGAGTACTTGGATTTGTTGGTTGAGAACGTGCCTCGGCTCTTGATCGTTAGAGGATACCGCAGAGACGTTGTAACTTTGTTCACTTAG 2940 44.18 MDNGEIESGEEEFHGQRGRKYRPVEAHDRAVLEMSSMDPGASSSSSSVPPISLKNVKVDSQTGTEADGNSPTRIEVDGPQRESKLEFFGFDSLVNILGLKSMMGEQIQAPTSPRDGENISITQGLPKTTDVKSGTLMGVFIPCLQNILGIIYFIRFTWIVGMAGIGESLVLVSFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLNAVPAAGLFRETVTKVNGTTVAAPIQSPSSHDLQVYGIIVTILLCFIVFGGVKMINRVAPAFLIPVLFSVVSIFLGIFVARKNDPSDGITGLSLESFKENWSSDYQMTNSAGIPDPLGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTALYLVSVLLFGALATREKLLTDRLLTATVAWPFPALIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPYFATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLLYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDAKSACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLIEIPTTFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKETFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQVEGAQPDESMEAFTAAQGRIASYLGEMKAAAKSRGTTLMADGKPVSVNEQQVGKFLNTTLKLNSTILRYSRMAAVVLVSLPPPPVDHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLFT 979
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6164214 6185267 - CmoCh13G005270.1 Cmo13g00527 394582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00527 979 MobiDBLite consensus disorder prediction 1 78 - -
Cmo13g00527 979 Pfam Solute carrier family 12 779 978 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cmo13g00527 979 Pfam Solute carrier family 12 648 769 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cmo13g00527 979 TIGRFAM 2a30: K-Cl cotransporter 70 979 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cmo13g00527 979 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 13 978 - -
Cmo13g00527 979 Pfam Amino acid permease 138 614 IPR004841 GO:0016020|GO:0055085
Cmo13g00527 979 MobiDBLite consensus disorder prediction 37 69 - -
Cmo13g00527 979 MobiDBLite consensus disorder prediction 8 32 - -
Cmo13g00527 979 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 13 978 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cmo13g00527 979 Gene3D Amino acid/polyamine transporter I 131 596 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g00527 Cmo18g00478 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00527 Cmo-Chr13:6164214 Cmo18g00478 Cmo-Chr18:3263640 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00527 K14427 - csv:101216218 1790.39