Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00596 ATGGAGAATAGTCGGGGAGGAGGAAGAGGGATGGCGGCGTTTTCGTCCTCGGCGGAAAGCAATACCAGGGCTCGTCCGAGCAATACAGCTAGCACCGACAACAGAGCTGCGGCACTTGTGCAATACAATGCTGATGCTGGGCTTTTGAACAAGTTTGAGCAATCGGATGCCTCTGGTGAGTCTTTTAACTATTCGAGATCAGTTCTTGAAGCTCCACAGTCTGTACCTGAAGAACAAATTACTGCTTATCTGTCTAAGATTCAGAGGGGTGGAATGGTTCAGCCGTTTGGTTGTTTGCTTGCGATTGAAGAATCTAGTCTTAAGATTATTAGCTATAGTGAGAATTGTTTTGAATTATTGGGGATAAATGATCAGTTTGAGTCGGCACCGGGGAAGGGTCTAATTGGGGTTCATATAAGAGCTCTGTTTACGCCTTCCTCCGGTGCTTCTTTGGCTAAAGCGGCTTCATCCAGGGAGATTTCGCTGTTGAATCCTGTTTGGGTTTATTCTAGGAATACCCAGAAGCCATTTTATGCCATACTGCATAGGATTGATGTGGGGATTGTAATTGATTTGGAGCCTGCACGGTCTGTTGATCCTGCACTGTCGCTTGCCGGCGCCGTGCATTCGCAGAAACTTGCGGTTCGAGCCATTTCCAGGTTGCAGGCTCTACCTGGTGGTGATATTGGTGTTTTATGTGATACGGTTGTGGAAGATGTTCAGAAGCTTACAGGGTATGATAGAGTGATGGTGTATAAGTTCCATGATGATGAACATGGTGAAGTAGTGTCAGAAATCAGAAGGTCGGACTTGGAGCCATATCTCGGTTTGCACTATCCTGCCATTGATATACCCCAAGCTGCTCGTTTCTTGTTCAAGCAGAACCGCGTTAGGATGATTTGCGATTGCCACGCGAAGCCTGTGCAGGTCATTCAAAGTGATGAGCTAAAGCAGCCTCTTTGTTTGGTTAATTCAACACTTCGATCACCACATAGTTGTCATTTGCAGTACATGGCAAATATGGGTTCCATAGCCTCATTGGCAATGGCAGTAATCATGAACAGTGATGACTCTCCAACAAGGTTATGGGGCCTGGTAGTGTGCCACCATACTTCACCACGATATGTCCCTTTCCCACTTCGTTATGCTTGCGAGTTTCTCATGCAGGCTTTCGGGCTGCAACTTTATATGGAGCTTCAATTGGCATTACAAATAACAGAGAAAAAGGTTCTCAAGACACAAACCTTACTCTGTGACATGCTCCTCCGAGGCTCCCCTTATGCATTGCTGACCCAGTCACCTAGTATAAAGGATCTCGTGAAGTGTGATGGCGCTGCATTGTACTATCAGGGGGCATGCTGTCTACTAGGTGTAACTCCAACTGAAGCCCAAGTTAAAAACCTTGTCGAGTGGATACTCAATAACCATGGAGATTCTACAGGACTGAGCACGGATAGCTTGGCTGATGCTGGCTATCCCGAAGCTGCTTCACTAGGTGATGCAATATGTGGTATGACTGCTGCAAGAATTAGTTCAAAAGATTTCTTATTCTGGTTCCGTTCCCATGCCGCAAAAGAAATCCAATGGGGAGGAGCCAAGCATCATCCAGATGATAAGGATGATGGTGGAAGAATGCACCCAAGGTCATCATTTAAAGCATTTCTTGAAGTTGCAAAGAGTAAAAGTATGTCATGGGAAGCTCAAGAAATAAATGCCATTCACTCATTGCAGCTTATTATGAGGGAGTCTTTCTCGAGCGCTAGAGACAGTGATTCGAAGGCAGAAATGTCTGTCCAGCAGAGTGATACTGTGTCTCAGGACATCGGCGAACTCAGTTCAGTAGCTTGTGAAATGGTTAGATTAATTGAAACAGCAACCGCTCCAATTTTTGGGGTTGACTCAACTGGTGTGATCAATGGATGGAATGCTAAAATAGCTGAACTCGTAGGATTACAAACTGGAGAAGCTTTGGGGAGATCTCTGGATGAAATCGTTCATGACGATTCACGTGGAACTGTTGGAAATTTAGTTCTTCATGCTCTGCAAGGTGTGGAAGACAAAAATGTGGAGTTAAAACTGAGAAAGTTTGGAACTGATAAAGAAAACTCTGCTGTGTATATTGTAGTTAATGCTTGCACAAGTAGGAATTACACAAATAAAGTTATTGGGGTTTGCTTTGTTGGGCAAGATATAACGTCGGAGAAGGGCATGAGGGATAGATTTATCCGTCTGCAGGGAGATTATAGGACAATTATTGAAAGTCTGAGTCCATTGATTCCACCAATTTTCGTTTCGGACGAGAATGGTTACTGCTGTGAATGGACTGCTGCCATGGAGAAGCTTTCTGGTTGGAGTAAAGATGAAGTTATAGGAAAAATGCTTGTAGGGGAGATTTTTGGGAACTTCTGTAGGTTGAAAGATCTAGATACCCTCACTAGGTTTATGATCCTATTATATCAAGGCATTGGTGGTGAACAAACTGAGAAGTTTCCATTAGGATTTTTCAATAAGAATGGTAACTATATGGAGGTGCTTTTAACATCAAACAAAAGGACTGATGCAGAAGGAAATGTCATTGGTTGTATCTGTTTCCTGCAAGTTGTTGAGCCAAACTTGCAAGGGGTCTCTGAAGGACTCGGCCTGGGCGAAAGACGGGGCAATTTGCAGCTTAAGGAGTTGACTTACTTAAAGCGGGAGATGAAAAATCCTTTAAATGGCATCAAATTTACTCATGAACTCCTTGTAAATTCTGGCATTACAGACAACCAGAAACTCTTCCTTGTTACTAGTGATGCGTGCGAGAGACAGATCATGGCGATCATTGAGGATATGGACTTCAGAAGTTTAGAAGTGGGCCAAGTACAGATAAACAGAGACGAGTTTGTCCTCGGGAGTGTTCTGGATGCAATTATCTGTCAAATCATGATTGTTGTCAGAGAGAAGAACATACAACTTTTTCATGAAATTCCAGAAGAAATCAAAGTGTTAACTCTTTGTGGCGATCAAATTAAACTTCAGCTGGTTTTATCAGATTTCTTACTTAGCGTAGTGCAGAACACGCCTGCTCTGGACGGTTGGGTTGAAATCAAAATTTCAGCTGGTTTGAAGCTTATACAAGATGGAAATGAACATATTCACTTGCAGATCAGAATGTCACATCCAGGTCAAGGTCTGCCTCCTGAACTAATCCAAGATATGGTTGGAGGAGGACAACAGTGGAGTTCAGAGCAAGGCCTCGCCCTAAATCTGTCACGCAGACTTCTCAATAAATTGAACGTGCTGAAATCCAGCAGAGTCCCAGCACATTCATGTCACCTTGCATACAACCAGTCCTACACACGTTGCGATGCTAAGCGTGATTTCGTGTTAGATTGTATTCGATTTGACGAGTCGGATGTAGCTACTTCTCAGATTCTAGAAAGTGTGGAAGCTCCGACAGGATTTGTTGAAATTGGTTACATATCCAATGTTCATGGGACTGAGGGGGAAGTTCGAGTGAAACCTGTTACTGATTTTCCTGAACTGCGATTCTCCACGCCTGGCACAAGATGGTTGAAGCAGCAAGTTTCGGGAAGGGAAGAAATCCGAGAAGTTGACTTGGAAGAGGGGAGGGAACACCCTGGTCGAAAGAGTTGGATACTGAAGTTTAAAGGAATCGATACTGCTGAACAGGCAAAACTACTCATTGGATCAACTCTCCTAGTGAGGGAAGAAGACCGACCAGAGTTGGAAGAAGGTGAATTTTATTCCCGTGACCTTATTGGCATGAGTGTTATTCTGAAGGAAACTGGTCAGTCCCTGGGAACCGTTGTTAATGTATTTGATAGCGGAGGGGCGGATCTTTTGCATGTCTTGCTTGATAGTTCCGAAGATATTCTTGATGCCACTGGAAATCCAACATCAACAGAGACTGGAGTTTCTGGTCGCCTTGTTTGGATACCTTTTGTCAAAGCAATTGTTCCTGTTGTTGATCTTGAAAGACGAGAAATGAAAATTACCCCTCCAAAAGGTCTTTTGGAATTAAATTTGAATTCTAACAAGAGATCAAAGAAAGAACGACGCCAACTTGAATGGAAAGAAAGGAAAAAATTCCAAAACAGTCTCATAGCTGCAAAAAAGAAACTGTCTGAAATGGAGCAGAAACACGTGTTCAATGGTTTCAAATTTGGAGAAAAAATGCAGGGAAGGTTACTTGCCGAACAGATAGTTGGTGTCAATTCTAAGTTGCTTCAAAAAGCTTTACAAGATATTGAGATTCCTACAAGAAGATTGAATGTTAACGAGTTATTCAACGCTTTTGAATTGGAGAAAATACAAAATACTTTGAAGGTATCAGATAAATGTGTCACTTCTGGTGCAAATGAAGAGGAACTTGGTAAACATACTAGTTTGCAGAAGAAGGGACTCAATCTCATATCTTCTGGAAAAACTGCCGTTGTTTTAGTTGTTAATGATGAGGGATGGTACGCTGACCTTGATATTGTTTGTGATAATGCTGAGCATCCAACATCTTCTTCCCTTCCTGATCTACTTGGTGATGATAGGAGGTTTGCAAAGGTCATTGAAGACCGCCCATACGTGCCTCTGATTTTGGTGTGCTCAGCTTCCAGAATTCATTCAATTGAAAAGCTTTTTATGGACAATGATTACTTTTCCTTCGATTCTGGAAAGATCTGGTTTTTGGAAGAACAGAGACTTCCAGTTGTTAGCAATGTGGTAGACGAACAAAACAAATACAAGATTTTGATGAAATCACCCTGGGAAATTCTACAATCCCCAGTTGGTTCTGGAGGAGTCATAAACTTGCTCTCATCATCCAAGGTTCTGGACAATCTTGCTGAAATTGGCGTGGAGTATGTCGAGATTTGCAGCAGCAGGCATAGAAGTGCAGGCACCAACGCTCTACTTCTTGGGTATATTGCATCGTGCAGTGCTAATATCGGGGTGAAGCTTCAAAAAGGTAGCAGTGGCTTTGAGAAAAGCTTTGAGTTGATATTCTCAATGAACTTCATGAAGAAAATGATGAAGCAAATGGATAAGCCTCAGTTCTATGGCATCCCCAAATCAAATGCGCACGTTGAGAAGGTTGACAAGGAGTGGGTTGACAACGTTCCTCCATCGGATCATTTACCCATCAGTCTCAACGAAAAATCTAGGTCCGGAACGGAATAA 5172 42.88 MENSRGGGRGMAAFSSSAESNTRARPSNTASTDNRAAALVQYNADAGLLNKFEQSDASGESFNYSRSVLEAPQSVPEEQITAYLSKIQRGGMVQPFGCLLAIEESSLKIISYSENCFELLGINDQFESAPGKGLIGVHIRALFTPSSGASLAKAASSREISLLNPVWVYSRNTQKPFYAILHRIDVGIVIDLEPARSVDPALSLAGAVHSQKLAVRAISRLQALPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDEHGEVVSEIRRSDLEPYLGLHYPAIDIPQAARFLFKQNRVRMICDCHAKPVQVIQSDELKQPLCLVNSTLRSPHSCHLQYMANMGSIASLAMAVIMNSDDSPTRLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLALQITEKKVLKTQTLLCDMLLRGSPYALLTQSPSIKDLVKCDGAALYYQGACCLLGVTPTEAQVKNLVEWILNNHGDSTGLSTDSLADAGYPEAASLGDAICGMTAARISSKDFLFWFRSHAAKEIQWGGAKHHPDDKDDGGRMHPRSSFKAFLEVAKSKSMSWEAQEINAIHSLQLIMRESFSSARDSDSKAEMSVQQSDTVSQDIGELSSVACEMVRLIETATAPIFGVDSTGVINGWNAKIAELVGLQTGEALGRSLDEIVHDDSRGTVGNLVLHALQGVEDKNVELKLRKFGTDKENSAVYIVVNACTSRNYTNKVIGVCFVGQDITSEKGMRDRFIRLQGDYRTIIESLSPLIPPIFVSDENGYCCEWTAAMEKLSGWSKDEVIGKMLVGEIFGNFCRLKDLDTLTRFMILLYQGIGGEQTEKFPLGFFNKNGNYMEVLLTSNKRTDAEGNVIGCICFLQVVEPNLQGVSEGLGLGERRGNLQLKELTYLKREMKNPLNGIKFTHELLVNSGITDNQKLFLVTSDACERQIMAIIEDMDFRSLEVGQVQINRDEFVLGSVLDAIICQIMIVVREKNIQLFHEIPEEIKVLTLCGDQIKLQLVLSDFLLSVVQNTPALDGWVEIKISAGLKLIQDGNEHIHLQIRMSHPGQGLPPELIQDMVGGGQQWSSEQGLALNLSRRLLNKLNVLKSSRVPAHSCHLAYNQSYTRCDAKRDFVLDCIRFDESDVATSQILESVEAPTGFVEIGYISNVHGTEGEVRVKPVTDFPELRFSTPGTRWLKQQVSGREEIREVDLEEGREHPGRKSWILKFKGIDTAEQAKLLIGSTLLVREEDRPELEEGEFYSRDLIGMSVILKETGQSLGTVVNVFDSGGADLLHVLLDSSEDILDATGNPTSTETGVSGRLVWIPFVKAIVPVVDLERREMKITPPKGLLELNLNSNKRSKKERRQLEWKERKKFQNSLIAAKKKLSEMEQKHVFNGFKFGEKMQGRLLAEQIVGVNSKLLQKALQDIEIPTRRLNVNELFNAFELEKIQNTLKVSDKCVTSGANEEELGKHTSLQKKGLNLISSGKTAVVLVVNDEGWYADLDIVCDNAEHPTSSSLPDLLGDDRRFAKVIEDRPYVPLILVCSASRIHSIEKLFMDNDYFSFDSGKIWFLEEQRLPVVSNVVDEQNKYKILMKSPWEILQSPVGSGGVINLLSSSKVLDNLAEIGVEYVEICSSRHRSAGTNALLLGYIASCSANIGVKLQKGSSGFEKSFELIFSMNFMKKMMKQMDKPQFYGIPKSNAHVEKVDKEWVDNVPPSDHLPISLNEKSRSGTE 1723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6604946 6618467 + CmoCh13G005960.1 Cmo13g00596 394651

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00596 1723 SMART HisKA_10 888 952 IPR003661 GO:0000155|GO:0007165
Cmo13g00596 1723 SUPERFAMILY GAF domain-like 407 584 - -
Cmo13g00596 1723 Pfam RimM N-terminal domain 1150 1239 IPR002676 GO:0006364
Cmo13g00596 1723 PRINTS Phytochrome signature 429 449 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 PRINTS Phytochrome signature 514 533 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 PRINTS Phytochrome signature 617 633 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 PRINTS Phytochrome signature 729 749 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 PRINTS Phytochrome signature 328 349 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 PRINTS Phytochrome signature 709 726 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 PRINTS Phytochrome signature 636 651 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 PRINTS Phytochrome signature 143 165 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 PRINTS Phytochrome signature 243 262 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 PRINTS Phytochrome signature 547 565 IPR001294 GO:0006355|GO:0009584
Cmo13g00596 1723 CDD PAS 625 731 IPR000014 -
Cmo13g00596 1723 TIGRFAM 16S_RimM: 16S rRNA processing protein RimM 1149 1338 IPR011961 GO:0005840|GO:0006364|GO:0043022
Cmo13g00596 1723 Pfam PAS fold 82 195 IPR013654 GO:0006355
Cmo13g00596 1723 PANTHER TWO-COMPONENT HISTIDINE KINASE 34 1089 - -
Cmo13g00596 1723 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1369 1688 IPR029044 -
Cmo13g00596 1723 Pfam Phytochrome region 412 586 IPR013515 GO:0006355|GO:0009584
Cmo13g00596 1723 SUPERFAMILY PYP-like sensor domain (PAS domain) 87 196 IPR035965 -
Cmo13g00596 1723 ProSitePatterns Phytochrome chromophore attachment site signature. 328 337 IPR013516 -
Cmo13g00596 1723 ProSiteProfiles PAC domain profile. 687 743 IPR000700 -
Cmo13g00596 1723 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1356 1661 IPR029044 -
Cmo13g00596 1723 Gene3D - 1243 1343 - -
Cmo13g00596 1723 Gene3D RimM 1140 1241 IPR036976 GO:0006364
Cmo13g00596 1723 SUPERFAMILY Translation proteins 1148 1242 IPR009000 -
Cmo13g00596 1723 Gene3D PAS domain 615 735 - -
Cmo13g00596 1723 Gene3D - 404 577 IPR043150 -
Cmo13g00596 1723 SUPERFAMILY PRC-barrel domain 1248 1338 IPR011033 -
Cmo13g00596 1723 MobiDBLite consensus disorder prediction 1703 1723 - -
Cmo13g00596 1723 Hamap Ribosome maturation factor RimM [rimM]. 1148 1338 IPR011961 GO:0005840|GO:0006364|GO:0043022
Cmo13g00596 1723 Gene3D - 931 1094 IPR036890 -
Cmo13g00596 1723 Pfam PAS fold 747 867 IPR013767 GO:0006355
Cmo13g00596 1723 Pfam PAS fold 617 731 IPR013767 GO:0006355
Cmo13g00596 1723 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 228 389 IPR016132 -
Cmo13g00596 1723 SMART gaf_1 228 409 IPR003018 GO:0005515
Cmo13g00596 1723 CDD HisKA 899 948 IPR003661 GO:0000155|GO:0007165
Cmo13g00596 1723 Gene3D - 209 560 IPR029016 -
Cmo13g00596 1723 Gene3D PAS domain 86 331 - -
Cmo13g00596 1723 SUPERFAMILY PYP-like sensor domain (PAS domain) 749 863 IPR035965 -
Cmo13g00596 1723 ProSiteProfiles PAS repeat profile. 614 684 IPR000014 -
Cmo13g00596 1723 Coils Coil 1361 1381 - -
Cmo13g00596 1723 SUPERFAMILY GAF domain-like 210 395 - -
Cmo13g00596 1723 SMART pas_2 616 682 IPR000014 -
Cmo13g00596 1723 SMART pas_2 746 816 IPR000014 -
Cmo13g00596 1723 PANTHER PHYTOCHROME E 34 1089 - -
Cmo13g00596 1723 MobiDBLite consensus disorder prediction 14 34 - -
Cmo13g00596 1723 Gene3D PAS domain 760 870 - -
Cmo13g00596 1723 ProSiteProfiles PAS repeat profile. 747 799 IPR000014 -
Cmo13g00596 1723 CDD PAS 758 868 IPR000014 -
Cmo13g00596 1723 ProSiteProfiles Histidine kinase domain profile. 895 1099 IPR005467 -
Cmo13g00596 1723 Pfam GAF domain 228 399 IPR003018 GO:0005515
Cmo13g00596 1723 SUPERFAMILY PYP-like sensor domain (PAS domain) 620 727 IPR035965 -
Cmo13g00596 1723 TIGRFAM sensory_box: PAS domain S-box protein 748 865 IPR000014 -
Cmo13g00596 1723 TIGRFAM sensory_box: PAS domain S-box protein 621 738 IPR000014 -
Cmo13g00596 1723 Pfam PRC-barrel domain 1245 1339 IPR027275 -
Cmo13g00596 1723 MobiDBLite consensus disorder prediction 1 34 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00596 K12123 PHYE; phytochrome E - csv:101214900 1855.88
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01491 Cmo-Chr3:10671732 Cmo13g00596 Cmo-Chr13:6604946 2.04E-07 dispersed
Cmo07g00029 Cmo-Chr7:180339 Cmo13g00596 Cmo-Chr13:6604946 1.36E-07 dispersed
Cmo13g00596 Cmo-Chr13:6604946 Cmo14g01619 Cmo-Chr14:12864015 0 dispersed
Cmo13g00596 Cmo-Chr13:6604946 Cmo18g00427 Cmo-Chr18:2811865 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g341 . Blo11g00254 . . . . Bma14g00962 . Cmo13g00596 . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0918 . . . Chy12g00014 . . . . Bda07g00948 . . . . Sed08g2698 . . . . Car13g00450 . . Cpe20g00492 Bhi08g02112 Tan05g2564 Cmetu12g2051 Lac10g1013 Hepe07g1807 . . Cla03g00673 Cam03g0720 Cec03g0696 Cco03g0732 Clacu03g0720 Cmu03g1311 Cre03g1004 Lsi02g00856 Csa01g02270 . Cme12g01235
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo16g01290 . 31 1193 Histidine Kinase Gene Family AT2G17820 65.0 0.0e+00 1438.7
Cmo06g00111 . 515 1725 Histidine Kinase Gene Family AT2G17820 63.1 0.0e+00 1428.3
Cmo04g00017 . 53 1033 Histidine Kinase Gene Family AT2G01830 70.5 0.0e+00 1321.6
Cmo04g02235 CST 23 1023 Histidine Kinase Gene Family AT2G01830 69.3 0.0e+00 1304.7
Cmo15g00925 CST 155 1182 Histidine Kinase Gene Family AT2G01830 67.1 0.0e+00 1268.4
Cmo11g01837 . 279 1229 Histidine Kinase Gene Family AT2G01830 53.2 2.1e-273 939.5
Cmo20g00674 . 297 1240 Histidine Kinase Gene Family AT2G01830 53.5 8.1e-273 937.6
Cmo08g00183 . 51 984 Histidine Kinase Gene Family AT2G01830 52.3 1.3e-265 913.7
Cmo02g00226 . 283 1214 Histidine Kinase Gene Family AT2G01830 51.2 8.2e-257 884.4
Cmo17g01385 . 58 980 Histidine Kinase Gene Family AT2G01830 50.7 6.9e-256 881.3
Cmo01g01734 CST 1 999 Histidine Kinase Gene Family AT5G10720 57.1 2.2e-290 995.7
Cmo09g00388 CST 1 996 Histidine Kinase Gene Family AT5G10720 56.5 4.1e-289 991.5
Cmo05g00967 . 1 1120 Histidine Kinase Gene Family AT1G09570 79.4 0.0e+00 1817.7
Cmo12g00639 . 23 1087 Histidine Kinase Gene Family AT1G09570 69.9 0.0e+00 1566.2
Cmo19g00869 . 18 1111 Histidine Kinase Gene Family AT1G09570 54.4 0.0e+00 1205.7
Cmo14g01619 CST 35 1120 Histidine Kinase Gene Family AT1G09570 54.4 0.0e+00 1195.6
Cmo06g01560 CST 29 1109 Histidine Kinase Gene Family AT1G09570 52.0 0.0e+00 1137.1
Cmo14g01619 CST 13 1061 Histidine Kinase Gene Family AT2G18790 79.1 0.0e+00 1670.6
Cmo06g01560 CST 28 1050 Histidine Kinase Gene Family AT2G18790 76.7 0.0e+00 1585.5
Cmo18g00427 . 31 1051 Histidine Kinase Gene Family AT2G18790 59.3 0.0e+00 1226.1
Cmo13g00596 . 31 1050 Histidine Kinase Gene Family AT2G18790 59.5 0.0e+00 1226.1
Cmo05g00967 . 21 1054 Histidine Kinase Gene Family AT2G18790 53.3 0.0e+00 1086.2
Cmo19g00869 . 26 1068 Histidine Kinase Gene Family AT2G18790 52.1 0.0e+00 1075.8
Cmo19g00869 . 12 1115 Histidine Kinase Gene Family AT5G35840 61.1 0.0e+00 1368.2
Cmo14g01619 CST 21 1122 Histidine Kinase Gene Family AT5G35840 52.7 0.0e+00 1147.5
Cmo05g00967 . 9 1114 Histidine Kinase Gene Family AT5G35840 51.8 0.0e+00 1110.5
Cmo06g01560 CST 29 1111 Histidine Kinase Gene Family AT5G35840 51.3 0.0e+00 1100.5
Cmo14g01619 CST 30 1122 Histidine Kinase Gene Family AT4G16250 77.2 0.0e+00 1710.3
Cmo06g01560 CST 32 1111 Histidine Kinase Gene Family AT4G16250 73.4 0.0e+00 1619.8
Cmo18g00427 . 38 1113 Histidine Kinase Gene Family AT4G16250 57.3 0.0e+00 1256.5
Cmo13g00596 . 32 1092 Histidine Kinase Gene Family AT4G16250 57.9 0.0e+00 1245.3
Cmo05g00967 . 8 1115 Histidine Kinase Gene Family AT4G16250 52.8 0.0e+00 1131.7
Cmo19g00869 . 26 1114 Histidine Kinase Gene Family AT4G16250 52.0 0.0e+00 1107.4
Cmo18g00427 . 15 1130 Histidine Kinase Gene Family AT4G18130 61.2 0.0e+00 1349.7
Cmo13g00596 . 15 1092 Histidine Kinase Gene Family AT4G18130 63.4 0.0e+00 1345.1
Cmo14g01619 CST 38 1120 Histidine Kinase Gene Family AT4G18130 59.0 0.0e+00 1275.4
Cmo06g01560 CST 40 1109 Histidine Kinase Gene Family AT4G18130 56.7 0.0e+00 1231.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0021256 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo13g00596 Cmo_Chr13 FPKM 10.933212 10.886409 13.735642 13.980983 13.212971 11.076537 12.727646 19.425535 20.739174 18.793526