Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00599 ATGGTAGTCGAAGAGACGATCAAAGCTACATCGATGGAAGATCTTTCTAATTCCATCGCAAATCAAAACCCTAGGGGACGAGGCAATGAGGAAGATGAGGATCTTGAGGAAGGAGAGATCGTCGGCGACGACGACTTGGACTCCTCCAATTTATCGGCGGCGATAGTGCATCAGCCTCACCCTTTGGAGCACCCTTGGACCTTTTGGTTCGATAACCCATCCGCCAAGTCCAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATATATACCTTCTCTACCGTGGAGGAGTTCTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTTAAACATAAAATTGAGCCTAAATGGGAGGATCCTGTCTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTATACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCTGTTGTCAACGTTAGATCTGGGCAGGATAAAATATCGATTTGGACTAAGAATGCTTCCAATGAAGCGGCGCAGGCGAGCATTGGGAAGCAGTGGAAGGAGTTTCTTGATTACAATGACAGCATTGGCTTTATATTCCACGACGATGCAAAGAAGTTTGACAGGCATGCGAAGAACCGATATACGGAATTTTATGTGGAAATCGCCATCGCTCAGATTCTTGTTCTGTACATGACGGCTTTAGTATGA 765 46.01 MVVEETIKATSMEDLSNSIANQNPRGRGNEEDEDLEEGEIVGDDDLDSSNLSAAIVHQPHPLEHPWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKFDRHAKNRYTEFYVEIAIAQILVLYMTALV 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6626533 6629459 + CmoCh13G005990.1 Cmo13g00599 394654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00599 254 MobiDBLite consensus disorder prediction 10 25 - -
Cmo13g00599 254 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 3 234 - -
Cmo13g00599 254 MobiDBLite consensus disorder prediction 1 36 - -
Cmo13g00599 254 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 3 234 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cmo13g00599 254 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
Cmo13g00599 254 SUPERFAMILY eIF4e-like 56 231 IPR023398 -
Cmo13g00599 254 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cmo13g00599 254 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g00599 Cmo18g00422 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00599 Cmo-Chr13:6626533 Cmo17g00144 Cmo-Chr17:812362 1.46E-71 dispersed
Cmo14g01118 Cmo-Chr14:7593714 Cmo13g00599 Cmo-Chr13:6626533 1.76E-30 transposed
Cmo13g00599 Cmo-Chr13:6626533 Cmo18g00422 Cmo-Chr18:2777211 1.28E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00599 K03259 - csv:101206312 457.218