Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00609 ATGACATCAGGGACGAGAATGCCCACTTGGAAGGAGAGGGAGAACAACAAGCGCCGTGAGAGGCGCCGACGTGCCATCGCCGCTAAGATCTTTCTCGGCCTGCGAATGTACGGAAACTATAAGCTTCCCAAGCACTGCGATAATAATGAGGTCCTCAAAGCCCTCTGTGTTGAAGCTGGGTGGACTGTAGAGGAAGACGGCACTACCTATCGGAAGGGATGCAAGCCTGTGGAACGCGATATCATGGGCGGATCAGCTTCTGCAAGTCCATGTTCATCTTATCAGCCGAGCCCATGTGCATCTTATAACCCAAGTCCTGCGTCTTCTTCCTTCCCAAGCCCTTCCCGTTACGCCATTAAAGGCAATGACAATGCTGCTGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTCTCCTCAGCTTCATCACCAGCCTCCTCCAGGCTGCCTCACCATCTTTATATTACTGGTGGCTCCATAAGTGCACCTGTTACCCCTCCGTCGAGCTCCCCAACTGCTCGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCATCGACCCCTCCGAGCCCTGGGCGTCAGATGTTGGCTGATTCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCGTCACCAACCTTCAGCCTTGTGGCTAGGAATCCTTTTGGATTTAAGGAGGCAATGTCTGCTGGAGGTCCTTCATTCGGATTTAAGGAGGCAATGTCAAATCCAATGTCTGCTGGAGGGTCTCGTAATTGGACTCCTACACAGAGCGGGACGTGCTCGCCCACGGTTGCTGCGGGCACCGATCATACTTCAGATGTTCCTATGACGGATGGGACTGCAGTGGAGTTTGCCTTCGGAAGTTGTTCGATTGGGTTGGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTTACACTTGGGAATTCAAGGACGAGGTGA 1029 52.28 MTSGTRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCVEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPCASYNPSPASSSFPSPSRYAIKGNDNAADPNSLIPWLKNLSSASSPASSRLPHHLYITGGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQMLADSAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGPSFGFKEAMSNPMSAGGSRNWTPTQSGTCSPTVAAGTDHTSDVPMTDGTAVEFAFGSCSIGLVKPWEGERIHEECISDDLELTLGNSRTR 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6674594 6677626 - CmoCh13G006090.1 Cmo13g00609 394664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00609 342 MobiDBLite consensus disorder prediction 158 186 - -
Cmo13g00609 342 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 342 - -
Cmo13g00609 342 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 342 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cmo13g00609 342 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Cmo13g00609 342 MobiDBLite consensus disorder prediction 1 21 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g00609 Cmo18g00412 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00712 Cmo-Chr4:3530555 Cmo13g00609 Cmo-Chr13:6674594 1.85E-135 dispersed
Cmo07g00506 Cmo-Chr7:2298841 Cmo13g00609 Cmo-Chr13:6674594 4.65E-49 dispersed
Cmo12g00435 Cmo-Chr12:2676074 Cmo13g00609 Cmo-Chr13:6674594 5.32E-40 dispersed
Cmo13g00609 Cmo-Chr13:6674594 Cmo16g00463 Cmo-Chr16:2222424 6.95E-127 dispersed
Cmo13g00609 Cmo-Chr13:6674594 Cmo18g00412 Cmo-Chr18:2705280 9.11E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10831 PF05687 BES1_N 5.90E-65 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00609 - - csv:101204637 535.413