Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo13g00659 | ATGGTGTTTTGTTGCTGCAATGATATAGATATGGCTCCAATGGTGCCGGAGACTCCACCGTTTTGTTTATCTGCTGAGTCCTTACGATTGGCTTCCTTTCCTGCCGCCACTCACCCACCACTCAACTCAGTTGCACAATCAAGATCTCATGTTCTTAACAAGCAGAGGTCCTTGTCTCCGGCTCCGCCTCCACAAACTACACTTTCCGATGCATTTAAGAGTGCACGTACCGATCAGAAGCGGTTTTCAACGCCGCCGCCTCAGAGGAAGGCACCTGGAAAAGAGAAGGGTAGAAGACTATTTAGTAAAAAAGCCAAGGAGCGCAATTCCTTAAAGGAAGAGAAGTTAAAAGGCCTTCTGAGGCATTTTGCCTCATTTAAAGGCAATGGGAAGTCCAAGTTCAAGGAGTCTTCTTGGACAAGGTTTTTTGAGCACAATGGGGGGAAGGTCACCGCTGTCGAGGCTGTAGATGAATCGTCTATTGACCTGTCCAAGTTGAGTTTCGGGCATAAATTTGCTTTCGGAGCTCATAGTCGGCTTTACCATGGACTTTACGAAGATAACGTTGTTGCTGCTAAGATGATCAATCTTCCAGTCGATGACGAAAATGGAGAACTCGCAGGTCGCTTAAAAAAGCAGTTTGATAGGGAAGTAACCCTTTTATCTCGTCTCCGCCATCCCAACGTTATAAAGTTGGTAGCAGCCGTGAAAATGCCACCCGTTTATTGCATCATCACTGAGTATCTACCTCTGGGTTCCTTAAGGGCATATCTTCACAAACTTGAAAAAAAATCTCTCCCATTGCAAAAACTATTTGCTATTGCCTTGGACATTGCTCGTGGGATGGAATACATTCACTCACAAGGCGTCGTTCATCGGGATCTCAAACCTGAAAACGTTCTTATTGATGAAAACTTTTGTCTAAAGATTGCCGATTTCGGCATCGCTTGTGAGGAGGCACGTTGTGATACACTAGCAGAGGACCCTGGAACTTTTCGTTGGATGGCCCCCGAGATGATCAAACGTAAACCTTATGGAAGAAAGGTTGATATGTACAGCTTCGGACTCATCCTGTGGGAATTAGTAGCTGGAAAAATCCCTTATGAGGATATGACTCCCATCCAAGCAGCTTTTGCAGTTGTAGATAAGAATATTAGACCGGCGATCCCGAGCGAGTGTCCTCCAGTGATGCAGGCGTTAATGGAGCAATGTTGGTCCACACAACCAGAAGAGAGGCCGGAGTTTTGGCAGGTGGTAAAAGTATTAGAGCAGCTTGAGAGTTGTGTTGGGGGAGATGGTGAAGTGTAG | 1308 | 45.95 | MVFCCCNDIDMAPMVPETPPFCLSAESLRLASFPAATHPPLNSVAQSRSHVLNKQRSLSPAPPPQTTLSDAFKSARTDQKRFSTPPPQRKAPGKEKGRRLFSKKAKERNSLKEEKLKGLLRHFASFKGNGKSKFKESSWTRFFEHNGGKVTAVEAVDESSIDLSKLSFGHKFAFGAHSRLYHGLYEDNVVAAKMINLPVDDENGELAGRLKKQFDREVTLLSRLRHPNVIKLVAAVKMPPVYCIITEYLPLGSLRAYLHKLEKKSLPLQKLFAIALDIARGMEYIHSQGVVHRDLKPENVLIDENFCLKIADFGIACEEARCDTLAEDPGTFRWMAPEMIKRKPYGRKVDMYSFGLILWELVAGKIPYEDMTPIQAAFAVVDKNIRPAIPSECPPVMQALMEQCWSTQPEERPEFWQVVKVLEQLESCVGGDGEV | 435 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 6946045 | 6948900 | + | CmoCh13G006590.1 | Cmo13g00659 | 394714 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo13g00659 | 435 | SUPERFAMILY | Protein kinase-like (PK-like) | 153 | 422 | IPR011009 | - | |
Cmo13g00659 | 435 | MobiDBLite | consensus disorder prediction | 44 | 84 | - | - | |
Cmo13g00659 | 435 | MobiDBLite | consensus disorder prediction | 44 | 107 | - | - | |
Cmo13g00659 | 435 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 290 | 302 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo13g00659 | 435 | MobiDBLite | consensus disorder prediction | 91 | 107 | - | - | |
Cmo13g00659 | 435 | CDD | STKc_MAP3K-like | 173 | 422 | - | - | |
Cmo13g00659 | 435 | SMART | serkin_6 | 166 | 425 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo13g00659 | 435 | Gene3D | Phosphorylase Kinase; domain 1 | 154 | 249 | - | - | |
Cmo13g00659 | 435 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 42 | 434 | - | - | |
Cmo13g00659 | 435 | Gene3D | Transferase(Phosphotransferase) domain 1 | 250 | 429 | - | - | |
Cmo13g00659 | 435 | Pfam | Protein tyrosine and serine/threonine kinase | 167 | 422 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo13g00659 | 435 | PANTHER | TYROSINE KINASE FAMILY PROTEIN | 42 | 434 | - | - | |
Cmo13g00659 | 435 | ProSiteProfiles | Protein kinase domain profile. | 166 | 425 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo13g00659 | 435 | PRINTS | Tyrosine kinase catalytic domain signature | 393 | 415 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo13g00659 | 435 | PRINTS | Tyrosine kinase catalytic domain signature | 246 | 259 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo13g00659 | 435 | PRINTS | Tyrosine kinase catalytic domain signature | 330 | 340 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo13g00659 | 435 | PRINTS | Tyrosine kinase catalytic domain signature | 284 | 302 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo13g00659 | 435 | PRINTS | Tyrosine kinase catalytic domain signature | 349 | 371 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo13g00659 | Cmo-Chr13:6946045 | Cmo13g00921 | Cmo-Chr13:8137683 | 2.16E-106 | dispersed | |
Cmo15g01338 | Cmo-Chr15:9162567 | Cmo13g00659 | Cmo-Chr13:6946045 | 7.26E-24 | dispersed | |
Cmo13g00659 | Cmo-Chr13:6946045 | Cmo18g00354 | Cmo-Chr18:2315755 | 0 | wgd | |
Cmo13g00659 | Cmo-Chr13:6946045 | Cmo03g01262 | Cmo-Chr3:9665644 | 0 | wgd | |
Cmo13g00659 | Cmo-Chr13:6946045 | Cmo07g00236 | Cmo-Chr7:1172838 | 6.43E-173 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74772 | PF07714 | PK_Tyr_Ser-Thr | 7.00E-61 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo13g00659 | - | - | cmax:111495774 | 822.002 |