Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00714 ATGATGAAAATTTGGCATCATTTGCTGCAGGGGAAGCTGGTAGATGGACCAGAAATAGCAGTAAAGAGGCTTTCCAGGACCTCAGGACAAGGGCTTGAAGAGTTCACAAATGAAGTTATGTTCTTCATCTATTGTTTTAATCATCTCTTTGGAAAACAATATGCAGATTCAACTAAAGGAAGAGTTTTAGATTGGCAAAAAAGATTCAACGTTATCGAAGGAATTGTTCGAGGGCTCTTATATCTTCATAGGGATTCACGACTAAAAATCATTCATAGAGATCTCAAACCCAGTAATATTCTACTGGATAGAGATTTAAATCCCAAGATTTCTGATTTCGGTACTGCCAGAATTTTTTACGGCAATGAAGCTCAAGCTAACACTACAAGAGTTGTGGGTACCTATGGCTATATGTCTCCTGAATATGTGTTGAATGGGCAATTCTCAGAGAAATCAGATGTGTTTAGTTTTGGAGTCTTATTGCTTGAAATTATCAGCGGAAGAAAGAACACAAGTTTTTATCGGAACGAACATGCCTTGAGCCTTCTAAAATTTGCATGGAAGTTATGGATGGAGGCTAATGTAGTTGCTTTGATTGATCAAACAATGTCTAAACTGCATCATGAAGCAGAGATTTTGAGGTGTATTCATGTAGGGCTCTTGTGTGTTCAAGAATTTGCAAACGACAGACCAAACATAACAACAATTCTTTCAATGCTTCACAATGAGATCGCTGATCTTCCGATGCCAAAACAACCTGGATTTAGTAGCAGCAACCAAATTGAGATTCAGAAAAATGAGGCTCCCGACAGTGTAGCCCTGGATGTAAGAAAACAAAAAATGGCGACCAACTTCAGGCGCGACCATTTGTCTTTGCTCTGTTTCATACCTCTGTTTTTCGGACACTCAATTGCAGTCGACATCTTGAAAGCAGGACAGTCCATTAACGACACCCAAGTAATTGTCTCAGCCGGCAACAAGTTTGAATTGGGGTTCTTCACTGACCCAAAGCCCTCCAATTTCAAGTATTTAGGAATATGGTACAAGGAAATTCCCGACGTTGTCGTTTGGGTAGCGAACAGAGATAACCCAATTGTAAACTCCTCTGCCACTCTAAAATTGAATGTCGATGGGAACTTAATTCTCGTCAATCAAACAGGGTCAGCTTTTTGGACTTCGAATAATCCGATTGTATCAGTTCAAGATCCTGTTGCGCAGCTGTTGGATTCAGGTAATTTCGTGCTGAGAGTTTCAAATTCAGGGTCTGAAGATTATGCGTGGCAGAGTTTTGATTATCCGTTTGATACTCTGTTATCGGGCATGAAGCTCGGGTGGGACTCCAAGTCGGGGTTGAACCGGAAGCTGATATCAAGGAAAAATCCAAGCGATTTGTCGTCTGGAGAACTCAGCTATGGCGTTAACTTAGATGGGCTGCCTGAACTTGTTGTTCGTACAGGAAACAAGACGATTTTCAGGGGGGGGCCATGGTTTGGTGATGGGTTTGCCAGAGCTCGCTCTGAGAGAGCAAATTTCATCTATAATGCTTCTTTTGAGATAACATATTCATATGATTCTCCGAATAGTGAACCTTGGAGAGCTGTGTTGGATCCAGGTGGGTTTGTTATACACTCCGAGTGGAACGGCGTGGACAGAGCATGGAAGAAATTATACACGTTTGAAGGATCAGGCTGCAACGATTACGAATTATGTGGAAATTTTGGTCTTTGTAATTCTGTTTTATTAGCAAATTGCGATTGTTTAGATGGGTTTAAACAAAAATCTGCCCAAAACATTTCAGATGGGTGCGTGAGAAAGGATGAAAAAACCTGCAGAGCAGGGGAGGGGTTTAAGAAGATAAGCGACGTAAAATTGCCAGAATCAACAGGGAACTTGGTGAAAATCAAAGTGGATATTCAAAATTGCGAGAAGGAATGCTTGAATGATTGTTCTTGCTTGGCGTATGGCACACTGGATCTTCCTAATGTTGGGCCAACCTGCGTCACCTGGTTTGACAGATTACTTGATGTTAGACGTGTTCGTGATCCTGGAACTGGAGATACCCTCTTTGTGAGAGTGGCAGCTTCAGAATTAGCACAAGTTTTGTTGTTGAATGGAACACTCCCAACCGGGCAAGAAATTGCGGTGAAGAAGCTAGCAGAAAGCTCCCATCAAGGGCAACAGGAGTTTAAAAATGAGGTCCTCTTCGTTTCCCAGCTGCAACATCGAAACCTTGTCAAGCTTCTTGGTTTCTGCATCCACAGGGAAGAGACATTACTTATTTATGAATACATGCCAAACAAAAGCTTGGACTACTTCCTTTTTGATGACCAAAGACGTTCAGTACTTAACTGGACAATGAGAAAGGATATCATAATTGGCATAGCTAGAGGACTTCTTTATCTCCATCGAGATTCAAGACTCCGAATAATTCACCGAGATCTTAAAGCCGCTAATATTTTATTAGATGGTGAAATGAAGCCAAAAATTTCAGACTTTGGCATTGCGCGTATGTTTGGTGAAGATCAAATGGAAACGAAAACACAAAGAGTTGTTGGGACATATGGCTACATGTCTCCAGAATATGCAATAGATGGTTGTTTTTCATTTAAATCCGATGTTTATAGCTTTGGAGTTATGGTTTTAGAAATAGTTAGCGGCAAGAAGAATAAAGGATTTTTTCACTCCGAGCATCAATTGAATCTTCTCGGACATGCATGGAAGCTTTGGAATGAAGGAAACGCCTTGAAATTAATAGATGGAGAGGTGGGTGATCAAATGCAAGAACATGAAGCACTGAAATACATAAATATTGGACTTTTATGTGTTCAAGGACGTCCGAAGGATAGACCAATTATGTCATCTGTGCTTTCCATGTTAGAAAGTGATATCATGGAGTTGATTCACCCAAAGCAACCTGGGTTCTATGAGGATAGATTTGTGTTGTCTGATATTGATCCATTGTTAGATCATAAATCGACTTCTACTTCGAATAATGTTACTATTACATTGTTAGACGACGGTCCTTTATTCATCCCAAGAACATCTCTTGCTAGCCATGTAGGGATGGGGCACAACAAAATTTCATATCAAACCATTTTCTATCTCAGCCGCACATAA 3117 40.58 MMKIWHHLLQGKLVDGPEIAVKRLSRTSGQGLEEFTNEVMFFIYCFNHLFGKQYADSTKGRVLDWQKRFNVIEGIVRGLLYLHRDSRLKIIHRDLKPSNILLDRDLNPKISDFGTARIFYGNEAQANTTRVVGTYGYMSPEYVLNGQFSEKSDVFSFGVLLLEIISGRKNTSFYRNEHALSLLKFAWKLWMEANVVALIDQTMSKLHHEAEILRCIHVGLLCVQEFANDRPNITTILSMLHNEIADLPMPKQPGFSSSNQIEIQKNEAPDSVALDVRKQKMATNFRRDHLSLLCFIPLFFGHSIAVDILKAGQSINDTQVIVSAGNKFELGFFTDPKPSNFKYLGIWYKEIPDVVVWVANRDNPIVNSSATLKLNVDGNLILVNQTGSAFWTSNNPIVSVQDPVAQLLDSGNFVLRVSNSGSEDYAWQSFDYPFDTLLSGMKLGWDSKSGLNRKLISRKNPSDLSSGELSYGVNLDGLPELVVRTGNKTIFRGGPWFGDGFARARSERANFIYNASFEITYSYDSPNSEPWRAVLDPGGFVIHSEWNGVDRAWKKLYTFEGSGCNDYELCGNFGLCNSVLLANCDCLDGFKQKSAQNISDGCVRKDEKTCRAGEGFKKISDVKLPESTGNLVKIKVDIQNCEKECLNDCSCLAYGTLDLPNVGPTCVTWFDRLLDVRRVRDPGTGDTLFVRVAASELAQVLLLNGTLPTGQEIAVKKLAESSHQGQQEFKNEVLFVSQLQHRNLVKLLGFCIHREETLLIYEYMPNKSLDYFLFDDQRRSVLNWTMRKDIIIGIARGLLYLHRDSRLRIIHRDLKAANILLDGEMKPKISDFGIARMFGEDQMETKTQRVVGTYGYMSPEYAIDGCFSFKSDVYSFGVMVLEIVSGKKNKGFFHSEHQLNLLGHAWKLWNEGNALKLIDGEVGDQMQEHEALKYINIGLLCVQGRPKDRPIMSSVLSMLESDIMELIHPKQPGFYEDRFVLSDIDPLLDHKSTSTSNNVTITLLDDGPLFIPRTSLASHVGMGHNKISYQTIFYLSRT 1038
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7197589 7203114 + CmoCh13G007140.1 Cmo13g00714 394769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00714 1038 SMART blect_4 312 433 IPR001480 -
Cmo13g00714 1038 Pfam Protein kinase domain 59 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo13g00714 1038 ProSiteProfiles Bulb-type lectin domain profile. 306 428 IPR001480 -
Cmo13g00714 1038 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 704 1004 - -
Cmo13g00714 1038 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 260 - -
Cmo13g00714 1038 Pfam PAN-like domain 610 676 IPR003609 -
Cmo13g00714 1038 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 704 1004 - -
Cmo13g00714 1038 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 260 - -
Cmo13g00714 1038 Pfam S-locus glycoprotein domain 491 593 IPR000858 GO:0048544
Cmo13g00714 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Cmo13g00714 1038 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 297 697 - -
Cmo13g00714 1038 Gene3D Phosphorylase Kinase; domain 1 3 48 - -
Cmo13g00714 1038 Gene3D Phosphorylase Kinase; domain 1 692 763 - -
Cmo13g00714 1038 SUPERFAMILY alpha-D-mannose-specific plant lectins 355 461 IPR036426 -
Cmo13g00714 1038 CDD STKc_IRAK 705 960 - -
Cmo13g00714 1038 SMART serkin_6 676 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo13g00714 1038 SUPERFAMILY Protein kinase-like (PK-like) 11 240 IPR011009 -
Cmo13g00714 1038 Gene3D Transferase(Phosphotransferase) domain 1 764 969 - -
Cmo13g00714 1038 Gene3D Transferase(Phosphotransferase) domain 1 51 249 - -
Cmo13g00714 1038 SMART ntp_6 611 692 IPR003609 -
Cmo13g00714 1038 ProSiteProfiles PAN/Apple domain profile. 610 693 IPR003609 -
Cmo13g00714 1038 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 297 697 - -
Cmo13g00714 1038 Pfam Protein tyrosine and serine/threonine kinase 709 958 IPR001245 GO:0004672|GO:0006468
Cmo13g00714 1038 ProSiteProfiles Protein kinase domain profile. 676 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo13g00714 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Cmo13g00714 1038 CDD B_lectin 313 433 IPR001480 -
Cmo13g00714 1038 CDD PAN_AP_plant 611 693 - -
Cmo13g00714 1038 Pfam D-mannose binding lectin 355 459 IPR001480 -
Cmo13g00714 1038 SUPERFAMILY Protein kinase-like (PK-like) 708 978 IPR011009 -
Cmo13g00714 1038 Gene3D - 303 430 IPR036426 -
Cmo13g00714 1038 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00714 Cmo-Chr13:7197589 Cmo18g00314 Cmo-Chr18:2010095 7.41E-75 dispersed
Cmo13g00714 Cmo-Chr13:7197589 Cmo13g00715 Cmo-Chr13:7204480 2.49E-76 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74778 PF07714 PK_Tyr_Ser-Thr 2.30E-43 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00714 - - cmo:103489252 1027.7