Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00766 ATGGGTTCCAGAGCACTGGTTTTCTTCCTCTTCCTTTCCTTTCTGGGTGCGTCTTTCAGGTATGGTTCTGCAGCGCAGGATGAGCAAGACAATGGTCTGGTTATGAACTTTTACAAGGATTCATGTCCCCAAGCCGAGGAGATTCATGTCCCCAAGCCGAGGATATCATCAAGGAACAAGTCAGGCTTCTCTACAAGCGCCACAAGAACACCGCTTTCTCTTGGCTCAGAAACATCTTCCACGACTGTGCTGTTCAAAAGGAGCCTGTCTGAGAAGGAGACAGACAGGAGCTTTGGACTTAGGAACTTTAGGTATATTGAGACTATTAAGGAGGCTTTGGAGAGGGAGTGCCCTGGAGTTGTGTCCTGTGCGGACATCCTTGTCTTGTCCGCTAGAGATGGCATTGTTTCTCTTGGAGGGCCTTATATCCCACTTAAGACAGGTAGAAGAGATGGAAGGAGAAGCAGAGCTGATATTTTGGAAGAGTATCTTCCAGATCATAATGAAAGCATGTCTGTTGTTCTTGAGAGATTTGCAGCCATGGGCATTGACACCCCTGGAGTGGTTGCTTTACTAGGAGCTCATAGCGTTGGGAGAACACACTGTGTGAAGCTGGTGCACCGGCTGTACCCGCAGGTAGACCCTGCGCTGAACCCAGGGCATGTGGAGCACATGTTGTACAAGTGTCCTGATGAGATCCCAGACCCCAAGGCTGTGCAGTACGTGAGGAACGACCGTGGCACACCCATGATTCTGGACAACAACTACTACAGAAACATACTGGACAACAAAGGGTTGCTGATAGTGGACCACCAGCTAGCCACAGACAAGAGAACGAAGCCATATGTGAAGAAAATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCTAGAGCCATTACCATCCTTTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGGAAGCAGTGCAATGTTGCCAACAAGCTGCACTGA 987 48.73 MGSRALVFFLFLSFLGASFRYGSAAQDEQDNGLVMNFYKDSCPQAEEIHVPKPRISSRNKSGFSTSATRTPLSLGSETSSTTVLFKRSLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRADILEEYLPDHNESMSVVLERFAAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPQVDPALNPGHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7421634 7423864 - CmoCh13G007660.1 Cmo13g00766 394821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00766 328 Pfam Peroxidase 88 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 SUPERFAMILY Heme-dependent peroxidases 34 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PANTHER PEROXIDASE 42 21 324 - -
Cmo13g00766 328 MobiDBLite consensus disorder prediction 54 75 - -
Cmo13g00766 328 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 MobiDBLite consensus disorder prediction 57 75 - -
Cmo13g00766 328 PANTHER PEROXIDASE 25-RELATED 21 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 CDD secretory_peroxidase 32 323 IPR033905 GO:0004601|GO:0042744
Cmo13g00766 328 ProSiteProfiles Plant heme peroxidase family profile. 32 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo13g00766 328 Gene3D Peroxidase, domain 2 165 304 - -
Cmo13g00766 328 Gene3D - 36 325 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01246 Cmo13g00766 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01246 Cmo-Chr3:9589649 Cmo13g00766 Cmo-Chr13:7421634 7.80E-99 dispersed
Cmo06g00364 Cmo-Chr6:1759854 Cmo13g00766 Cmo-Chr13:7421634 1.11E-106 dispersed
Cmo13g00766 Cmo-Chr13:7421634 Cmo14g00193 Cmo-Chr14:873646 3.08E-105 dispersed
Cmo13g00766 Cmo-Chr13:7421634 Cmo18g00116 Cmo-Chr18:820299 4.82E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00766 K00430 - csv:101214168 540.036