Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00808 ATGGCAGCCACGGCTCTGGCGGCGGAGCCGCCGCAAGAGGTATTTTCCTGGCTCAAAACCCTACCTCTGGCTCCTGAATACCACCCGACTTTGGCAGAGTTTCAAGATCCAATTTCATACATTTTCAAGATCGAAAAAGAGGCTTCCAAGTTTGGAATCTGCAAAATTGTGCCCCCTGTATCTCCATCACCGAAGAAAACTGTAATTGTCAATTTCAATAGGTCGCTTGCAGCTCGTGCCCCCTGTTCTGACACGAGCGATTCCAAGTCTCCGCCTACATTCACTACTCGTCAACAACAGATCGGGTTTTTCCCGCGTAAAACTCGGCCGGTTCAGAAATCAGTGTGGCAGAGCGGCGAGTACTACACATTTCAGCAATTTGAAGCTAAGGCGAAGAGCTTTGAGAAGAGCTATTTGAAGAAATGTGCGAAGAAAGGGGGGCTTTCGCCTTTAGAAATCGAGACGCTCTATTGGAGAGCCACTTTGGACAAGCCGTTTTCAGTGGAATATGCGAACGACATGCCTGGTTCAGCTTTTGTGCCGGTAAATGCAAAAATGCTTCGGGAGGCAGGGGAAGGAACAACGCTTGGGGAGACGGCATGGAACATGAGGGGGGTGTCTAGGGCGAAGGGGTCTCTATTGAAGTTTATGAGGGAAGAGATTCCAGGAGTTACTTCGCCAATGGTGTACGTAGCTATGATGTTCAGCTGGTTTGCTTGGCATGTAGAAGACCATGACTTGCATAGCTTAAATTATCTGCATATGGGGGCGGGAAAGACATGGTATGGCGTTCCTAGAGATGCTGCTGTGGCGTTTGAAGAGGTTGTAAGGGTTCAGGGATACGGAGGAGAAATCAATCCCCTCGTCACTTTTGCTGTTCTTGGTGAGAAGATCACTGTGATGTCACCTGAAGTTCTAGTTAGCGCTGGAGTTCCATGTTGCAGGTTAGTGCAAAATGCTGGTGAATTTGTTGTCACTTTTCCTCGGGCTTATCATACAGGTTTCAGTCATGGGTTTAACTGTGGGGAGGCAGCCAATATTGCAACTCCAGAATGGGTAAGGCTTGCTAAAGATGCTGCAATTCGTAGAGCTTCGATCAATTATCCTCCGATGGTCTCTCATTTTCAGTTGCTATACGATCTTGCTTTAAGTTCCAGATCACCTCTGTGCACGGGTGCTGAACCAAGAAGTTCACGACTAAAAAATAAAAGAAAGAGTGAAGGGGAAGCAGTTATAAAAGAGTTATTTGTACAGAATATTGTAGAGAATAACAGCCTGCTGGACATTCTTGGAAGAGGAGCGTCGGTTGTACTTCTTCCCCCAGGTTCTTCAGATTCTATTTATTCGAGACAGCGCATTGGATCCCACCCGAGAGCAAAATCTAGATTTCCTGTTGGTTTTTGCAGTTCTAAGGAAGAAACCAAATCTTCTCAAAGTTTTGATTATGATAATCTCACACTAGAAAATAGCCAGGGAATGAATCAAGTTAAAGGTTTCTATTCAGCTAACAGGCTGTATTCTACTCTCTCTGAAAGAAACACGGAGAATTTATGTGATTCAAGATCGAAGACTTCGAATGGCAGCAACGAACGAGGTGGTAATGTTCTTAGTGATGGATTATCAGATCAAAGGCTGTTTTCTTGTGTCACATGTGGCATTTTAAGCTTTGCCTGTGTAGCCATCGTCCGACCCAGAGAACAAGCTGCTAGGTACCTTATGTCAGCTGACTGTAGCTTCTTTAATGATTGGGCTGTTGGTTCTGGGATTGCTATTAGAGATGGGCATGCAGTTAGCTCTCAGCAGATTAGTAATAGTGGAAAACGAGATACGTGCGTTTCTGATGGTTTGTACGACGTCCCAGTCCAGGCTGTCAATCGCCAGCTTCCAATTGCAGATGGAAGTTACAAAGCTAATCTAAGTACTGAAAAACGGAATGAGACTTCTGCCCTTGGCATGCTCGCATTGGCATATGGACATTCTTCCGATTCTGAGGAGGACAATGCTGAAGCAGATGCTGCTTTAAATCCCGGCGATGCTAAACTAACGGTTTGTTCTTCAGGAAACCAATATCAGTATGACAATTCTGGTCTTACTTCTAGTGAAAATTGCAAAAATACTGCAACTTTGGATCACAATGCCTCGTCATTTGGCATTAACGCTACAGATCAAATGCACTTCCAAATCAATGACTATGAAGAATTTGGACAAGCTAGATGTTCTTCTGAGTCTGAAATGGATGGCATAGGTTCAACTAAGAAAAATGGCTTGTCACCTAGATATCAAGATTTGCATGTGAACGACAGATCTTCCTTAGACGCTGATACTGAAAAACCAACGTTTGACGAATCCACGGAACCGGTGGAGATTGAGAATATGCCATTTGCTCCAGATATTGATGAAGACTCCTCTAGGTTGCATGTATTCTGCCTAGAGCACGCAAAAGAAGTGGAACAACAACTTCGACCAATTGGAGGAGCGCACATTCTTTTACTCTGTCATCCAGACTATCCGAAGATGGAGGCAGAAGCAAAATTGGTGGCACAAGAATTAAGTATGGACCATATGTGGACCGATACGACGTTCAGAGGTGCCACCGAAGATGAAGAAAGGAGAATTCAGTTAGCTTTAGATAGCGAGGAAGCGATTCCAGGTAATGGAGATTGGGCTGTAAAGTTGGGAATAAATCTGTTCTACAGTGCCAACCTTAGTCACTCTCCTCTTTATAGTAAGCAGATGCCATACAATTCTGTTATTTATAATGCATTTGGCCGTAGTGCTACTCCCAACGCTTCTGGTAAGCCGAAAGTCTATCAAAGAAGGACTGCTGGCAAGTTGAAGCGAATAGTTGCAGGGAAATGGTGTGGGAAAGTCTGGATGTCGAATCAAGTTCATCCTTTGCTAGCAAAGCAAGATCCTCAACAAGAAGATGTAGACGTCTTCCATTCTTGGACAATGCCGGATGAGAAGTTTGACAGGAAATCGGAAAATGTCCGTAAAAATGAGACTGTTATGGTGAATAGAAAATCCGCTGGCAAGAGAAAAATGACTCGTGGGAGCGGAACAGCTAAAAAAATGAAACCTCGAGAGTCAGAGGACATGGTTTCAGATGATTCAGTCGAAGATTGTGTCGATCAGCATCATAAGATTCATCGGAACAAGCGATACAAATTTGTTGAGATCAATGATGCTATGTCTGATGATTCTGTTGAGGATGATTCTTGTGGAAAACATGGAGGAGTTTCCATCAGCAAGGGAGTGACATATTGTCGAACGTATGACACCGGTTCAGAGGACTCTCTCGGAGATCGTCGTAATCAGCAGCACAGAGGGTTCTCTGGATTCAAGCTGCCGAAATGGGGTGAGATAGAACCTGCAGTTTCTGATGATTCCTTAGAGCACGATTCTTCTCGGCATCGTGAGCAACATACAAGGATTCCAAGAAGCAAGCAAACCAATATTCTTAAAAAGAACGTCGTTTCACATGATATACGGGACGATAGTTTTCTTTGGCATCATCAAAGGACTTCCAGAAGCAAGAAGGCGAAATCAATCGAGAGTGAAGATGTTTCAGAGGACTCTGTTGAAAATGATTCTCATCAGCATAGAAGTAGGCCTCAAAGGAAACCAGCCAAACCCACATCGAGGGAAGACGTATTCTCAGACGATCCAGACGAAGATGATAATTCTCTTCTGCAGCATAGAAGAAACATGCAATTCAATACATCAGATAACCAACTTGATGATAGTGTTAATCAATACCGGAGGAGAGTACTCCGAAGTAAGCCAGTCAAGGCCGAGACAATTTCTCAAATGAAACAAGAGATCCTGCGATCTGCGAAGCGAGGAGCCTCGCAGACTTTGAAAGAAGAATTTGCTCAATCCTTAAAATGTGGAGGCCGCCATACCTCAAACTTAGAGACCCCTCAGCCAAGAATACAACATGCCACTAATCGGCACGGTAAGCAAGCTAAGAGGAATAGTAAATCGACCGATTTGGAATCAGAAAACGAGCAACCAGGTGGACCTAGCACACGTCTTCGAAAAAGAACTCTAAAGCCTACTAAACTTTCAGAAGCGAAACTAAAGGATAAAAAACCAATTAGCAAGAAAAAGGTGAAGAATAGTTCATCTTTGAAGACTCCAGCAGGCCGTAGAGATTCAAAAGCAGCAGGGGATGAGGAATCAGAATATCTTTGTGACATCGAGGGTTGCAATATGAGTTTCGGTTCAAAACAAGAACTCGTCGTGCACAAACGAAATGTTTGTCCTGTCAAAGGGTGTGGGAAGAAGTTCTTCTCACACAAGTACCTCGTGCAGCATCGTCGAGTCCACATGGACGACCGTCCCCTTAAATGTCCATGGAAGGGCTGCAAGATGACGTTCAAATGGGCATGGGCACGAACAGAACATATTCGTGTTCATACAGGTGCCCGACCTTACGTTTGTGCTGAACCAGGATGTGGTCAGACATTCAGATTCGTTTCGGATTTCAGTCGTCACAAGCGGAAGACTGGACATTCAACAAAGAAAGCTAGGGTTTCTGGGTGTTCAAATGTGAGCATAATGGAACCTTCTGAAGCCGTTTCAATCCCTAATCACTGTGAAGTATCGGCTTCTGAGTTTCAATCTTCTTCGCAGTTTCGTAGTTCTGTTCTTGATCCTGTGGCTACTGATGATCGCATCCATGCAGAGCTTCAGGAATTGGATTTGAAGGATGAGAAAGAGGAGACCGTGAAGGATTTTGATGACGGTGGAGAATGGGAAGTTGAGAAGAATCCCGATGAAGGTGAGGGAAATGATGCGAAGAAGATCGGTGAGAGTGATCGAGATAGAAGCGTTAGGAATGACGACGGCGATGACGATGACGATGAGGAGGTTGATGCAGCCGACGGCGACGGCGGTGAGGTGGAGAATAAAGGGGATTGGAGAGGCAAAAACAACCAGTATCCAGTACGACCGGAGGCGGAGGATTGTGCCTTTTACCTCAAGACTGGGACCTGCAAGTTTGGATCATTTTGCAAATTCAATCACCCTCTGCGAAAGAAAAACCAGGTTGTTTCTGAGAAATTAAAGTACGAAGACGATTCAGCTAGGCTGGCGGGCAAGACGGAATGCAAGTTTTACTTGAGGACGGGGGGTTGTAAATTCGGGGACGCATGTAGATATAACCACACGAGACCAAAAGCGTTGGCAAGCTCAATTCTAGAGCTTAACTTCCTTGGTCTGCCAATCCGACCAGATGAAAAAGAATGTCCCTTTTACATGCGCACCGGGTCCTGCAAATACGGAGCTAACTGCAAGTTTAACCATCCTGATCCCACAACTGTTGTTGTACCCGAATCTCCGTCAGGATATAACAATGGAGTGCCCCTACAAGGTGGATCACAATCACATATCCCATCCTGGAATTCACCAAGAGTACTGAATGAAGCTACAGCATTTGTACCTGCTGTGATTCCACCATCTCCAGATTCAGAATGGAACGGTTACCAGGCTCCCGTATATCCATCAGAAATCAGCGTGCTTCCACCTCCGACATACGTCGTGAACAATATAGCATCTGAGACGGATATCTATCCTTCTCATCAGCAGGCGGAAGAGTATCCCGAACGACCTGGTCAACCCGAATGCAGCTACTTTCTAAAGACGGGGGACTGTAAATTTAAAACTCTTTGCAAATATCACCATCCAAAGAATCGGAACCCGAAGTTACCTGCTTGCACTCTCAATGATAAAGGCCTGCCTTTGAGACCTGATCAGAACATATGCACATATTATAGTCGTTACGGCATCTGCAAGTTCGGGCCATCTTGCAAGTTCGACCATCCTATGCTTCCAGCTTCTTCAACCGTGGGCGTGGGCGAGCTTGAGCAGCAACCTCGCTACGGAAACTTTAGTGCTGCAGAAGGGGCTGAAATGGCTGGGGGAGGGAGCAGAAACAGCCCCACAGTTGAGCAGTCTGCTTAA 5967 45.2 MAATALAAEPPQEVFSWLKTLPLAPEYHPTLAEFQDPISYIFKIEKEASKFGICKIVPPVSPSPKKTVIVNFNRSLAARAPCSDTSDSKSPPTFTTRQQQIGFFPRKTRPVQKSVWQSGEYYTFQQFEAKAKSFEKSYLKKCAKKGGLSPLEIETLYWRATLDKPFSVEYANDMPGSAFVPVNAKMLREAGEGTTLGETAWNMRGVSRAKGSLLKFMREEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVQGYGGEINPLVTFAVLGEKITVMSPEVLVSAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWVRLAKDAAIRRASINYPPMVSHFQLLYDLALSSRSPLCTGAEPRSSRLKNKRKSEGEAVIKELFVQNIVENNSLLDILGRGASVVLLPPGSSDSIYSRQRIGSHPRAKSRFPVGFCSSKEETKSSQSFDYDNLTLENSQGMNQVKGFYSANRLYSTLSERNTENLCDSRSKTSNGSNERGGNVLSDGLSDQRLFSCVTCGILSFACVAIVRPREQAARYLMSADCSFFNDWAVGSGIAIRDGHAVSSQQISNSGKRDTCVSDGLYDVPVQAVNRQLPIADGSYKANLSTEKRNETSALGMLALAYGHSSDSEEDNAEADAALNPGDAKLTVCSSGNQYQYDNSGLTSSENCKNTATLDHNASSFGINATDQMHFQINDYEEFGQARCSSESEMDGIGSTKKNGLSPRYQDLHVNDRSSLDADTEKPTFDESTEPVEIENMPFAPDIDEDSSRLHVFCLEHAKEVEQQLRPIGGAHILLLCHPDYPKMEAEAKLVAQELSMDHMWTDTTFRGATEDEERRIQLALDSEEAIPGNGDWAVKLGINLFYSANLSHSPLYSKQMPYNSVIYNAFGRSATPNASGKPKVYQRRTAGKLKRIVAGKWCGKVWMSNQVHPLLAKQDPQQEDVDVFHSWTMPDEKFDRKSENVRKNETVMVNRKSAGKRKMTRGSGTAKKMKPRESEDMVSDDSVEDCVDQHHKIHRNKRYKFVEINDAMSDDSVEDDSCGKHGGVSISKGVTYCRTYDTGSEDSLGDRRNQQHRGFSGFKLPKWGEIEPAVSDDSLEHDSSRHREQHTRIPRSKQTNILKKNVVSHDIRDDSFLWHHQRTSRSKKAKSIESEDVSEDSVENDSHQHRSRPQRKPAKPTSREDVFSDDPDEDDNSLLQHRRNMQFNTSDNQLDDSVNQYRRRVLRSKPVKAETISQMKQEILRSAKRGASQTLKEEFAQSLKCGGRHTSNLETPQPRIQHATNRHGKQAKRNSKSTDLESENEQPGGPSTRLRKRTLKPTKLSEAKLKDKKPISKKKVKNSSSLKTPAGRRDSKAAGDEESEYLCDIEGCNMSFGSKQELVVHKRNVCPVKGCGKKFFSHKYLVQHRRVHMDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKARVSGCSNVSIMEPSEAVSIPNHCEVSASEFQSSSQFRSSVLDPVATDDRIHAELQELDLKDEKEETVKDFDDGGEWEVEKNPDEGEGNDAKKIGESDRDRSVRNDDGDDDDDEEVDAADGDGGEVENKGDWRGKNNQYPVRPEAEDCAFYLKTGTCKFGSFCKFNHPLRKKNQVVSEKLKYEDDSARLAGKTECKFYLRTGGCKFGDACRYNHTRPKALASSILELNFLGLPIRPDEKECPFYMRTGSCKYGANCKFNHPDPTTVVVPESPSGYNNGVPLQGGSQSHIPSWNSPRVLNEATAFVPAVIPPSPDSEWNGYQAPVYPSEISVLPPPTYVVNNIASETDIYPSHQQAEEYPERPGQPECSYFLKTGDCKFKTLCKYHHPKNRNPKLPACTLNDKGLPLRPDQNICTYYSRYGICKFGPSCKFDHPMLPASSTVGVGELEQQPRYGNFSAAEGAEMAGGGSRNSPTVEQSA 1988
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7608227 7620373 + CmoCh13G008080.1 Cmo13g00808 394863

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00808 1988 ProSiteProfiles Zinc finger C3H1-type profile. 1871 1899 IPR000571 GO:0046872
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1008 1038 - -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1173 1218 - -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1279 1389 - -
Cmo13g00808 1988 ProSitePatterns Zinc finger C2H2 type domain signature. 1452 1474 IPR013087 -
Cmo13g00808 1988 Gene3D - 1635 1694 - -
Cmo13g00808 1988 SMART c3hfinal6 1700 1726 IPR000571 GO:0046872
Cmo13g00808 1988 SMART c3hfinal6 1652 1679 IPR000571 GO:0046872
Cmo13g00808 1988 SMART c3hfinal6 1747 1772 IPR000571 GO:0046872
Cmo13g00808 1988 SMART c3hfinal6 1917 1944 IPR000571 GO:0046872
Cmo13g00808 1988 SMART c3hfinal6 1871 1898 IPR000571 GO:0046872
Cmo13g00808 1988 ProSiteProfiles Zinc finger C3H1-type profile. 1917 1945 IPR000571 GO:0046872
Cmo13g00808 1988 SUPERFAMILY CCCH zinc finger 1746 1773 IPR036855 GO:0046872
Cmo13g00808 1988 ProSiteProfiles Zinc finger C2H2 type domain profile. 1450 1479 IPR013087 -
Cmo13g00808 1988 SUPERFAMILY CCCH zinc finger 1652 1681 IPR036855 GO:0046872
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1125 1141 - -
Cmo13g00808 1988 Pfam jmjN domain 25 58 IPR003349 -
Cmo13g00808 1988 ProSiteProfiles Zinc finger C3H1-type profile. 1652 1680 IPR000571 GO:0046872
Cmo13g00808 1988 SMART c2h2final6 1420 1444 IPR013087 -
Cmo13g00808 1988 SMART c2h2final6 1450 1474 IPR013087 -
Cmo13g00808 1988 SMART c2h2final6 1397 1419 IPR013087 -
Cmo13g00808 1988 SMART c2h2final6 1480 1506 IPR013087 -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1566 1648 - -
Cmo13g00808 1988 SMART cupin_9 195 364 IPR003347 -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1173 1229 - -
Cmo13g00808 1988 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 4 1504 - -
Cmo13g00808 1988 SUPERFAMILY CCCH zinc finger 1915 1943 IPR036855 GO:0046872
Cmo13g00808 1988 SUPERFAMILY beta-beta-alpha zinc fingers 1436 1478 IPR036236 -
Cmo13g00808 1988 SUPERFAMILY CCCH zinc finger 1703 1727 IPR036855 GO:0046872
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1287 1316 - -
Cmo13g00808 1988 ProSiteProfiles JmjC domain profile. 198 364 IPR003347 -
Cmo13g00808 1988 PANTHER LYSINE-SPECIFIC DEMETHYLASE 4 1504 - -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1351 1365 - -
Cmo13g00808 1988 Gene3D - 1860 1945 - -
Cmo13g00808 1988 ProSitePatterns Zinc finger C2H2 type domain signature. 1482 1506 IPR013087 -
Cmo13g00808 1988 ProSiteProfiles Zinc finger C2H2 type domain profile. 1420 1449 IPR013087 -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1096 1158 - -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1617 1631 - -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1962 1988 - -
Cmo13g00808 1988 ProSiteProfiles Zinc finger C3H1-type profile. 1699 1727 IPR000571 GO:0046872
Cmo13g00808 1988 ProSiteProfiles Zinc finger C3H1-type profile. 1745 1773 IPR000571 GO:0046872
Cmo13g00808 1988 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 1656 1678 IPR000571 GO:0046872
Cmo13g00808 1988 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 1703 1724 IPR000571 GO:0046872
Cmo13g00808 1988 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 1747 1771 IPR000571 GO:0046872
Cmo13g00808 1988 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 1873 1898 IPR000571 GO:0046872
Cmo13g00808 1988 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 1920 1944 IPR000571 GO:0046872
Cmo13g00808 1988 SMART JmjN_1 23 64 IPR003349 -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1566 1616 - -
Cmo13g00808 1988 Gene3D - 1700 1782 - -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 1022 1038 - -
Cmo13g00808 1988 ProSitePatterns Zinc finger C2H2 type domain signature. 1422 1444 IPR013087 -
Cmo13g00808 1988 ProSiteProfiles JmjN domain profile. 24 65 IPR003349 -
Cmo13g00808 1988 SUPERFAMILY Clavaminate synthase-like 209 378 - -
Cmo13g00808 1988 Gene3D Cupin 17 368 - -
Cmo13g00808 1988 ProSiteProfiles Zinc finger C2H2 type domain profile. 1480 1511 IPR013087 -
Cmo13g00808 1988 Pfam JmjC domain, hydroxylase 228 346 IPR003347 -
Cmo13g00808 1988 MobiDBLite consensus disorder prediction 516 535 - -
Cmo13g00808 1988 Gene3D Classic Zinc Finger 1418 1506 - -
Cmo13g00808 1988 SUPERFAMILY beta-beta-alpha zinc fingers 1468 1502 IPR036236 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00808 - - - csv:101210063 2501.09
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cmo13g00808 Cmo18g00184 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00808 Cmo-Chr13:7608227 Cmo19g00232 Cmo-Chr19:1610482 4.04E-73 dispersed
Cmo14g01672 Cmo-Chr14:13175212 Cmo13g00808 Cmo-Chr13:7608227 7.03E-17 dispersed
Cmo18g00184 Cmo-Chr18:1268440 Cmo13g00808 Cmo-Chr13:7608227 0 transposed
Cmo18g00647 Cmo-Chr18:8136617 Cmo13g00808 Cmo-Chr13:7608227 9.81E-13 transposed
Cmo13g00808 Cmo-Chr13:7608227 Cmo18g00183 Cmo-Chr18:1259893 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g893 Blo04g00708 Blo16g00248 . . . Bpe13g00218 Bma06g00242 . Cmo13g00808 Cmo18g00184 . . . . . Cpe20g00333 . . . . . . . . . . . . . . . Cone2ag0950 Cone16ag0051 . . Lsi02g00466 Csa01g00921 Chy12g01205 Cme12g01626 . . Bda11g01626 Bda14g00777 . Bpe15g00167 Bma03g00756 . Sed08g2465 . . Cma13g00777 Cma18g00208 Car13g00625 Car18g00202 Cpe09g00988 . Bhi08g01694 Tan05g2898 Cmetu12g0034 Lac10g0537 Hepe07g2163 . . Cla03g00322 Cam03g0338 Cec03g0330 Cco03g0344 Clacu03g0340 Cmu03g0946 Cre03g0639 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008005 0 1 1 1 1 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10850 PF02373 JmjC 3.30E-36 CL0029 Cmo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo13g00808 Cmo_Chr13 FPKM 1.510885 1.842224 2.184186 2.10476 1.388192 2.578531 2.037718 0.0 1.67185 0.0