Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00835 ATGGCGACGACGACCACAAGTATTGGCGGCGGCGGCGGCGGCGGTGGTGGTGGGGAGGATAGAGTTATGGCTACTGCTCAGCAGATTGTTAAGAGCCTCAATACACCCAAGGAGGTTCAAGAAGACATGCTTTTGATCTTCTCTAGTTTTGACAATCGTCTTTCTAATATCTCCAGTTTGGTCAACAGTGGAGATTCGAAGAGGGAAGGGGATCGGTATGAAGCTTCTGAGAAGCTGATTCTTCGTTGGGATTCTGGTCCTGGAGCTTCTCGGAACTCCCTTAATTGGGAGGATTCGCCGGAGGAGGCGGTTGAGTACTTATCGGCGGTGGATGATATCATTCAGTGGATCGATGAGTTGTCAATTCGTTCGGATTCTGCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCGAGGCTTGAGGATGAGTTTCGTCATATGTTGATTCGGAACACTGTCCCTCTCGATGCTGAGCATCTCTACGGTTCAATTCGGAAGGTTTCGCTCTCTTTTGCTTCACACGACAGCGAAAATTCCGATGAGTTTGAGTCGTTTGCCGATGTTGACCGTGGTTCTGGAATCTTTCATGAGCGTGGTGTCAGTTTGGGCGATGATTTGCGAGTCGATTTGATCAATCCTGACGCTGTCGTTGATTTGAAAGAGATCGCCGACCGGATGATTCGGTCTGGTTACGAAAAAGAGTGTCTCAACGTGTATACTGGTGTCCGACGCGATGCTCTTGATGAATGCTTGGTGGTTCTTGGAGTTGAGAAGCTAAGTATTGAGGATGTCCAGAAAATTGATTGGAAGATCTTGGACGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTCCGAGTCCTTTTGACGGGCGAGAAGCGACTGTGTGACTATATCTTCAGCGGGTCCGATGACTCCGAGGAAGTCTGCTTCAATGAGACTGCTAAAGGGTGCATCAGGCAGTTACTGAATTTTGCAGAGGCCATTGCCATAGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTGGAATACGTTCTGCCGGACTTGCAGGCTATGATCACTGATGAATTTGTGATTGAGGAGGCGCAAGGAGTGCTTTCTAGGCTGGGAGAGGCCGCTAAAGGTACATTTGTTGAGTTCGAGAATGCTGTTCGGAACGAGACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTCACTCGTTATGTCATGAATTACTTAACATTGGTTGTGGTTTATAGTAAGACTCTTGATGCACTTTTAGAAGGCGACGACGAAGATTTGCATCACCTAGGGGGTGATGGTGCTGAAAATTTGGAGTTGGAAACTATGTCGCCATTGCCTCATCGGCTGTTTTCATTGTTATCATCACTGGAGACCAATCTAGAGAGAAAATCCAAACTCTATGGCGATGATTCGATTCAATATATATTTCTCATGAACAATATACAATACATTGTGCAGAAAGCAAAAGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGTAAGCGCCGAGGCCAGGTTCGCATATATGCGACGAACTATCTTAGGGCGTCTTGGGGTAAATTATTAACTTTCTTGAAGGAAGAAGGCACTGGTGGGAGCTCCAATAGTGCCCTGAAACTAGCTACTTTGAAGGAAAAGTTCAAAAATTTCAATGCTGGCTTTGAGGAAATCTATAGAATTCAGACAGGTTGGAAGGTTGCCGATGCTCAACTACGAGAGGAGCTCCGAATTTCAGTATCGGCAAAAGCGCTACCTGCATATCGTGCCTTCTTGGGAAGGCATGGAAGTCAGTTAGAGAATACAAGACATGCTGGGAGGTATATAAAGTACACATCGGATGACTTGGAGAACTATTTATTGGATTTGTTTGAAGGATCACCACAAGTTATACACAACTTAAGAAGAAAAAGTAGTTCATAG 1980 45.81 MATTTTSIGGGGGGGGGGEDRVMATAQQIVKSLNTPKEVQEDMLLIFSSFDNRLSNISSLVNSGDSKREGDRYEASEKLILRWDSGPGASRNSLNWEDSPEEAVEYLSAVDDIIQWIDELSIRSDSAEIVDRAENAIQIAMSRLEDEFRHMLIRNTVPLDAEHLYGSIRKVSLSFASHDSENSDEFESFADVDRGSGIFHERGVSLGDDLRVDLINPDAVVDLKEIADRMIRSGYEKECLNVYTGVRRDALDECLVVLGVEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEVCFNETAKGCIRQLLNFAEAIAIGERSVEKLFRILDMYEALEYVLPDLQAMITDEFVIEEAQGVLSRLGEAAKGTFVEFENAVRNETSKKTMLNAEIHPLTRYVMNYLTLVVVYSKTLDALLEGDDEDLHHLGGDGAENLELETMSPLPHRLFSLLSSLETNLERKSKLYGDDSIQYIFLMNNIQYIVQKAKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLTFLKEEGTGGSSNSALKLATLKEKFKNFNAGFEEIYRIQTGWKVADAQLREELRISVSAKALPAYRAFLGRHGSQLENTRHAGRYIKYTSDDLENYLLDLFEGSPQVIHNLRRKSSS 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7754168 7756147 - CmoCh13G008350.1 Cmo13g00835 394890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00835 659 Gene3D Exocyst complex component Exo70 92 651 - -
Cmo13g00835 659 SUPERFAMILY Cullin repeat-like 92 644 IPR016159 -
Cmo13g00835 659 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 657 IPR004140 GO:0000145|GO:0006887
Cmo13g00835 659 MobiDBLite consensus disorder prediction 1 20 - -
Cmo13g00835 659 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 54 657 - -
Cmo13g00835 659 Pfam Exo70 exocyst complex subunit 281 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g00037 Cmo13g00835 CCT
Cmo10g00061 Cmo13g00835 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00011 Cmo-Chr1:36167 Cmo13g00835 Cmo-Chr13:7754168 5.05E-148 dispersed
Cmo01g00735 Cmo-Chr1:3794549 Cmo13g00835 Cmo-Chr13:7754168 1.28E-122 dispersed
Cmo13g00020 Cmo-Chr13:176737 Cmo13g00835 Cmo-Chr13:7754168 6.93E-124 dispersed
Cmo13g00835 Cmo-Chr13:7754168 Cmo14g01223 Cmo-Chr14:10395134 1.06E-153 dispersed
Cmo15g00783 Cmo-Chr15:3851042 Cmo13g00835 Cmo-Chr13:7754168 8.57E-111 dispersed
Cmo01g00483 Cmo-Chr1:2299830 Cmo13g00835 Cmo-Chr13:7754168 2.28E-141 transposed
Cmo13g01120 Cmo-Chr13:9132537 Cmo13g00835 Cmo-Chr13:7754168 4.42E-127 transposed
Cmo10g00061 Cmo-Chr10:282379 Cmo13g00835 Cmo-Chr13:7754168 0 wgd
Cmo11g00037 Cmo-Chr11:157117 Cmo13g00835 Cmo-Chr13:7754168 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00835 K07195 - csv:101212753 1167.14