Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00881 ATGAGGGACTCCTTGCTCTCCCTTGATGCAGGTGGGACATTTGCTCTATATTCATTACTATGCCGTCATGCTAAAATAGGAACTATCCCTAACCATGACCACAGTGATGAGAAGCTTACAACTTATAGTTGTTCCAAGTACCGTGAACAATCATTTGCTGCAAAAACTAAGAGATGGCTGGAAGGACATCGTGTTAAGAAACACGCAATTCTTGTTCTTGTTCTTGTTGGCTCTTGCATGGTGATTGGGGATGGGATTCTAACACCTGCTATTTCAGATGTAGCTGTTCTTGTTGCTATTGTCATACTTGTTTTCTTGTTTACCATGCAACGTTATGGCACAGATAAAGTTGGTTGGCTTTTTGCCCCGGTAGTTTTTCTGTGGTTCATCTTAATAGGAGGCATCGGCATTTATAACATCTGTAAGTATGATAACGGTGTCCTTAGAGCCTTTTCTCCAGTATATATATATCGGTACTTCAAAAGGGGAGGGAAAGTTGGATGGATATCCCTTGGAGGGATCATGCTTAGTATTACAGGAACTGAAGCACTTTTTGCAGACCTATCCCATTTTCCAGTTTCCTCCATACAAATTGCTTTTACAGTTGTTGTATTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCCTATCTCATGAAAAACCCAAATTATGTTGCCGGTGCCTTCTACCATTCAATTCCAGATAGTATATATTGGCCAGTATTTTTTGTTGCAACTACCGCTGCGATCGTTGCTAGCCAAGCCACCATATCTGCAACCTTTTCATTAATCAAGCAAGCCCTTGCACTTGGTTGCTTTCCAAGAGTTAAAGTTGTTCATACTTCTAAGACGTTCCGTAATCAAATATATATTCCTGATATTAATTGGATCCTGATGGTCCTTTGCATTGCCGTGACAGCTGGGTTCAAAAATCAAAGCCAAATTGGAAATGCTTCAGGGACAGCAGTGATCATAGTGATGTTGGTAACCACATGCCTCATGACTTTAATAATGATACTAGTGTGGCACTCCCACTGGGCTCTAGTCCTGCTCTTCACTTGGTTATCACTGCTCGTGGAGGGTTTCTACCTCTCCTCAGTTATCCAGAAGGTTTATCAAGGTGGGTGGGTTCCATTGGTTATAGCAACAGCCTTTTTCATCATCATGTACACTTGGCATTATGGTACAGCCAAACGTTATGAGATTGAGATGCACACTAAGGTTTCAATGGCATGGATTCTTAGCCTCGGCCCCAGTTTAGGACTTGTAAGGGTACCTGGGATAGGACTCGTGTACACAGAACTAGCAAGTGGAGTCCCCCACATCTTTTCACACTTCATCACAAACTTACCCGCCATTCATTCTGTTGTGGTTTTTGTCTGTTTGAAGTGTTTGCCTGTCTGCACAATCCCGGAAGAAGAGAGATTTTTGGTAAAACGGATTGGACCTAAGAACTTTCGCATGTTTCGCTGTGTAGCTAGATATGGTTACAAAGACCTCCACAAGAAAGATGATGACTTTGAGAAGAAACTCTTTGATAGCCTCTTCTTATTTGTTCGACTCGAGTCTTTGATGGATGGCGGGTCTTCAGATTCGGACGTGTCGAGCCTACTTGATCCACAAAATGAAACAGTTACAGAGTTCCCATTGAACACCCTTAATTCGACTTGCTCGTCTATGGAATTTACAAACCTTCGAACGGCAGACTCGATTCAGCTTGCCAATTCTCCATTGAATCAGAACCAAATCATGGTACCATCCAATCAAGCAAACCATCAGACTGAGATAGATGAGTTAGAGTTCTTGGTTAGCTGTAAAAATGTCGGCGTTGTACACATTCTTGGAAATACAGTAATGACAGCTAGGAGGGACTCCAGCCTCTTCAAAAAGATCGCCATTGATTATGTATATGCATTTCTTAGGAAGATCTGCAGAGCGAACAGCGCGATGTTCAATATTCCGCATGAGAGTTTGCTTAATGTTGGCCAAACATTCTATGTATGA 2007 42.15 MRDSLLSLDAGGTFALYSLLCRHAKIGTIPNHDHSDEKLTTYSCSKYREQSFAAKTKRWLEGHRVKKHAILVLVLVGSCMVIGDGILTPAISDVAVLVAIVILVFLFTMQRYGTDKVGWLFAPVVFLWFILIGGIGIYNICKYDNGVLRAFSPVYIYRYFKRGGKVGWISLGGIMLSITGTEALFADLSHFPVSSIQIAFTVVVFPCLLLAYSGQAAYLMKNPNYVAGAFYHSIPDSIYWPVFFVATTAAIVASQATISATFSLIKQALALGCFPRVKVVHTSKTFRNQIYIPDINWILMVLCIAVTAGFKNQSQIGNASGTAVIIVMLVTTCLMTLIMILVWHSHWALVLLFTWLSLLVEGFYLSSVIQKVYQGGWVPLVIATAFFIIMYTWHYGTAKRYEIEMHTKVSMAWILSLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCLKCLPVCTIPEEERFLVKRIGPKNFRMFRCVARYGYKDLHKKDDDFEKKLFDSLFLFVRLESLMDGGSSDSDVSSLLDPQNETVTEFPLNTLNSTCSSMEFTNLRTADSIQLANSPLNQNQIMVPSNQANHQTEIDELEFLVSCKNVGVVHILGNTVMTARRDSSLFKKIAIDYVYAFLRKICRANSAMFNIPHESLLNVGQTFYV 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7970476 7973729 - CmoCh13G008810.1 Cmo13g00881 394936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00881 668 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 10 665 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo13g00881 668 Pfam K+ potassium transporter 10 500 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo13g00881 668 PANTHER POTASSIUM TRANSPORTER 10 665 - -
Cmo13g00881 668 TIGRFAM kup: potassium uptake protein 11 667 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00881 Cmo-Chr13:7970476 Cmo11g01562 Cmo-Chr11:11227075 0 dispersed
Cmo13g00881 Cmo-Chr13:7970476 Cmo13g00883 Cmo-Chr13:7976775 0 proximal
Cmo13g00881 Cmo-Chr13:7970476 Cmo18g00252 Cmo-Chr18:1675166 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00881 K03549 - csv:101217671 1078.16