Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00882 ATGGCGTCAGGACGCAAGGCTGTTGAGGATACTGACGATAGAGATAGTAGTATCTGGGTTTTGGATCAGCAGTTGGACCAGCCAATGGAGGAGGAGGCTAGGCGGATAAGAAATGCGTATCAGGAAAAGGAACATTCTGTACTTAAAATTCTACAACTTGCATTCCAAAGCCTTGGAATAGTCTACGGAGATTTGGGCACTTCCCCTTTATATGTCTTCTATAACACGTTCCCCGATGGAGTTGAAAATACAGAGGACTTGATAGGAGCTCTTTCATTGATTATATACTCTCTAACTCTCATTCCCCTTATCAAGTACGTGTTTATTGTCTGCAAGGCAAATGACGATGGTCAAGGTAATTTGTTTCCAACTGTAAGTTACCTCTACTCAAGAACATTTTTGCTGTTGCGTCTTATGTTAGGAACTCATACTTTCTTTAGGCATTATCAATCAATGTTCCTTACAAATAATGAGATACTTGTCCCGATGATTTCATGTCACAGATGGATAAATGAAGGACGCAAGAAACCAACTTGGGACGAAAAGACTTTATGA 555 40.36 MASGRKAVEDTDDRDSSIWVLDQQLDQPMEEEARRIRNAYQEKEHSVLKILQLAFQSLGIVYGDLGTSPLYVFYNTFPDGVENTEDLIGALSLIIYSLTLIPLIKYVFIVCKANDDGQGNLFPTVSYLYSRTFLLLRLMLGTHTFFRHYQSMFLTNNEILVPMISCHRWINEGRKKPTWDEKTL 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7973865 7974758 - CmoCh13G008820.1 Cmo13g00882 394937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00882 184 PANTHER POTASSIUM TRANSPORTER 9 129 - -
Cmo13g00882 184 Pfam K+ potassium transporter 54 130 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo13g00882 184 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 9 129 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00882 Cmo-Chr13:7973865 Cmo18g00252 Cmo-Chr18:1675166 1.55E-52 dispersed
Cmo13g00882 Cmo-Chr13:7973865 Cmo13g00883 Cmo-Chr13:7976775 2.60E-53 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00882 K03549 - csv:101217671 207.223