Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g00914 ATGCAGAGCTCTTCGGTCACCTTTTCGCCTTCTCTTCCTCTTCTCAAGCCTCGGAGGCCTCATACTTCGTTCTTCAGCTCTGGATGTAACTCAATTCGATCATCTTCTTCAAATTCCAGAGATCTCAGTGACCTGAACAATGTCAGTCTTCCTTCCTCTTGGCCCCGGCGATCTTGGACTTTGTCGACTTCTCCTTTTTCGTCCTCGAAACTCCGCCCATGGACCGGTGTACCTTCGTTTGCTTCGGATTTTGATGCGAATCATTTCAAGGTTCAGGCGGCTGCGGTTCCGGAAAGCTCAGAGGAGGCCGCCAGTGCTGGCGGTAGCCTAATGAAAACGTTGGAGCTCGGATTGTTGTTTGGCCTCTGGTACCTTTTCAACATCTACTTTAACATCTTCAACAAGCAGGTCCTCAAGGTGTTTCCGTTCCCTGTAACTGTCACTGCTGTTCAATTTGCTGTAGGCACTGTACTTGTTCTTCTTATGTGGGGACTTAATCTCTACAAAAGGCCTAAGATTAGTGGCGCTCAGCTTGCTGCTGTTCTGCCGCTCGCGTTAGTTCACACATTGGGAAATCTTTTTACGAACATGAGTCTTGGGAAAGTGGCCGTATCGTTCACCCACACAATTAAAGCTATGGAGCCTTTTTTTTCAGTTATCCTGTCAGCAATGTTTCTTGGAGAGACTCCTACTCCCTGGGTTGTTGCATCCATTATACCAATTGTTGGCGGTGTTGCATTGGCATCTGCCACTGAGGCCTCCTTCAACTGGGCCGGATTTTCTAGTGCAATGGCATCCAATTTGACTAATCAATCTCGTAATGTCCTTAGCAAAAAGGTCATGGCGAAAAAAGAGGATTCAATGGACAACATCACCCTCTTTTCAATTATAACAATCATGTCCTTTTTCTTATTGTCCCCTGTTGCTGTCTTCATGGAAGGTGTCAAGGTTACTCCTGCATACTTACAATCAGCTGGATTGAACGTAAACCAAGTCTTCACTAGGTCTCTTCTTGCTGCCCTTTGTTTCCATGCATACCAACAGGTTTCTTACATGATATTGCAAAGAGTATCGCCTGTTACCCACTCAGTAGGCAATTGTGTAAAGCGTGTTGTTGTCATCGTGAGCTCTGTTATCTTCTTCCAAACACCTGTTTCTCCAATCAACTCTATTGGCACTGGAATAGCTCTTGCTGGGGTTTTCCTGTATTCAAGGGTTAAGCGCATCAAAGCCAAGCCGAAGACTGCTTAA 1251 45.88 MQSSSVTFSPSLPLLKPRRPHTSFFSSGCNSIRSSSSNSRDLSDLNNVSLPSSWPRRSWTLSTSPFSSSKLRPWTGVPSFASDFDANHFKVQAAAVPESSEEAASAGGSLMKTLELGLLFGLWYLFNIYFNIFNKQVLKVFPFPVTVTAVQFAVGTVLVLLMWGLNLYKRPKISGAQLAAVLPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGETPTPWVVASIIPIVGGVALASATEASFNWAGFSSAMASNLTNQSRNVLSKKVMAKKEDSMDNITLFSIITIMSFFLLSPVAVFMEGVKVTPAYLQSAGLNVNQVFTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINSIGTGIALAGVFLYSRVKRIKAKPKTA 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8091354 8095114 + CmoCh13G009140.1 Cmo13g00914 394969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g00914 416 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 25 391 - -
Cmo13g00914 416 Pfam Triose-phosphate Transporter family 115 404 IPR004853 -
Cmo13g00914 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 328 407 - -
Cmo13g00914 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 159 249 - -
Cmo13g00914 416 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 114 414 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cmo13g00914 416 PANTHER SOLUTE CARRIER FAMILY 35 25 391 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g00914 Cmo18g00130 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00914 Cmo-Chr13:8091354 Cmo16g00906 Cmo-Chr16:5410802 2.26E-64 dispersed
Cmo13g00914 Cmo-Chr13:8091354 Cmo18g00130 Cmo-Chr18:937564 0 wgd
Cmo13g00914 Cmo-Chr13:8091354 Cmo04g02826 Cmo-Chr4:20236593 8.17E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g00914 K15283 - csv:101203848 668.307