Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g01015 ATGCGAACCCAGATCGGAACTCGGTTGCTTGCTCTGTTTCTTTTGGGGTTCTGTGTTCTACTATCTACTGTGAGGCCAGATCTTGGCTCTGATAGAACAGCTCTGTTGGCCCTTCGCTCTGCTGTGGGTGGCCGAACTCTTCGGCTCTGGAATGTGACTGATCAGAATCACTGTTCTTGGCCTGGGATTCAATGCGAGGACAATCGTGTCACTGTTCTGCGTCTTCCCGGAGAGGCGCTTTTTGGTCAATTACCGACCGGCATTTTTGGGAACTTGACTCAGCTTCGCACTCTCAGCCTTCGGCTCAACGCCCTTTCCGGTCCGCTCCCATCAGATCTCTCTGCCTGCATTAATCTTCGCAACCTCTATTTGCAAGGTAATGAGTTTTCAGGTCTTGTCCCTGATTTCTTGTTCCAGCTTCATGATCTTGTTCGTCTTAATTTGGCGTCCAATAACTTTTCTGGGGAGATCTCTTCTGGGTTCAACAATTTGACCCGTCTTAGGACGCTGTTCCTCGAGAACAATCGCCTATCTGGGTCTATCCCGGATTTGAAGATCCCTATGGATCAGTTCAATGTTTCCAACAATCAATTAAATGGGTCGGTTCCAAAGGGATTACAGTCGTTTTCTTCGCGTTCCTTTTTGGGCAATTCTCTCTGCGGCCGCCCTCTAGAGGTTTGCGTTGGTGATCTTGTTGTGCCAACAGGGGAGGTTGGGGACAATGGTGGCTCTGGACACAAGAAAAAGCTGTCGGGGGGAGCCATTGCTGGGATTATCATTGGATCTGTACTGGGTTTTGTGTTGATACTTGTAATCTTAATGCTTTTGTGCCGAAAGAAAAGTGCCAAGCAAACGCGTTCAGTCGATTTAGCCACAGTGAAGGTTCCTGAAGTTGAAGTTCAGCCGGGTAAGCCAGTCGGCGATCTTGAAAATGGCGGTCATAGTGATGGTTTTACTGTACCAGCCACTGCCACTGTCACTGCCACTGCCACTGCTGCTGCAACAGCGGCGGCGGCAACAGTGAATGGCAATGGAACTGGGTCTAAAAAATTGGTGTTTTTTGGTAATGCTGCAAGGGTTTTTGATTTGGAGGATCTTTTGAGGGCTTCAGCCGAAGTGTTGGGGAAAGGAACCTTTGGGACTGCTTACAAAGCTGCATTGGAAGTGGGTTCTGTAGTGGCTGTGAAGAGGTTGAAGGATGTCACCATAACTGAGAGGGAATTCAGAGAGAAGGTTGAAGCTGTTGGATCTATGGATCATGAAAACTTGGTCCCTCTCCGGGCTTACTATTTCAGTGCTGACGAGAAGCTTATTGTCTATGATTACATGCCCATGGGAAGCTTATCTGCTCTTCTACACGGAAACAAAGGAGCTGGAAGGACTCCATTGAGTTGGGAAATCAGGTCTGGAATTGCCCTTGGAGCTGCTCGTGGAATTGAATATCTGCATTCACAAGGTCCTAATGTCTCCCATGGAAACATAAAATCGTCGAATATTCTACTAACCAAATCCTACGATGCTCGAGTCTCCGATTTCGGTCTAGCGCATCTTGTTGGACCATCGTCCAGCCCCAACAGAGTAGCTGGTTACCGCGCACCAGAGGTCACTGATCCTCGTAAAGTATCCCATAAGGCTGATGTGTATAGTTTTGGCGTATTGCTATTGGAGCTTTTGACAGGAAAGGCTCCTACCTACTCCCTTTTGAATGAGGAAGGAGTTGATTTACCTAGATGGGTGCAGTCAGTTGTTAGGGAGGAATGGACTTCTGAAGTTTTCGACCTCGAACTTCTTAGGTACCAAAACATCGAGGAGGAAATGGTTCAACTATTGCAGCTTGCAGTCGATTGCGCAGCTCAGTATCCTGACAAGCGCCCCACAATGTCCGAAGTCACAAAGCGTATAGAAGAGCTTCGCCAATCCAGCCTACACGAAGTTGTCAATCCACAACCCGACGCCACTCGTGAATCAGACGACATGTCTTCTAGGTGA 1989 48.16 MRTQIGTRLLALFLLGFCVLLSTVRPDLGSDRTALLALRSAVGGRTLRLWNVTDQNHCSWPGIQCEDNRVTVLRLPGEALFGQLPTGIFGNLTQLRTLSLRLNALSGPLPSDLSACINLRNLYLQGNEFSGLVPDFLFQLHDLVRLNLASNNFSGEISSGFNNLTRLRTLFLENNRLSGSIPDLKIPMDQFNVSNNQLNGSVPKGLQSFSSRSFLGNSLCGRPLEVCVGDLVVPTGEVGDNGGSGHKKKLSGGAIAGIIIGSVLGFVLILVILMLLCRKKSAKQTRSVDLATVKVPEVEVQPGKPVGDLENGGHSDGFTVPATATVTATATAAATAAAATVNGNGTGSKKLVFFGNAARVFDLEDLLRASAEVLGKGTFGTAYKAALEVGSVVAVKRLKDVTITEREFREKVEAVGSMDHENLVPLRAYYFSADEKLIVYDYMPMGSLSALLHGNKGAGRTPLSWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSSPNRVAGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPTYSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNIEEEMVQLLQLAVDCAAQYPDKRPTMSEVTKRIEELRQSSLHEVVNPQPDATRESDDMSSR 662
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 8615786 8618800 + CmoCh13G010150.1 Cmo13g01015 395070
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g01015 662 SUPERFAMILY Protein kinase-like (PK-like) 372 634 IPR011009 -
Cmo13g01015 662 MobiDBLite consensus disorder prediction 639 662 - -
Cmo13g01015 662 PANTHER OS05G0588300 PROTEIN 12 657 - -
Cmo13g01015 662 Gene3D Ribonuclease Inhibitor 144 227 IPR032675 -
Cmo13g01015 662 SUPERFAMILY L domain-like 47 212 - -
Cmo13g01015 662 ProSiteProfiles Protein kinase domain profile. 368 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo13g01015 662 Gene3D Phosphorylase Kinase; domain 1 334 442 - -
Cmo13g01015 662 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Cmo13g01015 662 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Cmo13g01015 662 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Cmo13g01015 662 Gene3D Transferase(Phosphotransferase) domain 1 443 658 - -
Cmo13g01015 662 PANTHER INACTIVE RECEPTOR KINASE-RELATED 12 657 - -
Cmo13g01015 662 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Cmo13g01015 662 Pfam Protein kinase domain 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo13g01015 662 CDD STKc_IRAK 374 637 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00778 Cmo-Chr1:4050900 Cmo13g01015 Cmo-Chr13:8615786 0 dispersed
Cmo13g01015 Cmo-Chr13:8615786 Cmo14g00844 Cmo-Chr14:4442207 0 dispersed
Cmo13g01015 Cmo-Chr13:8615786 Cmo18g00062 Cmo-Chr18:402885 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74799 PF00069 Pkinase 7.50E-39 CL0016 Cmo PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g01015 - - csv:101222458 1116.29