Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo13g01015 | ATGCGAACCCAGATCGGAACTCGGTTGCTTGCTCTGTTTCTTTTGGGGTTCTGTGTTCTACTATCTACTGTGAGGCCAGATCTTGGCTCTGATAGAACAGCTCTGTTGGCCCTTCGCTCTGCTGTGGGTGGCCGAACTCTTCGGCTCTGGAATGTGACTGATCAGAATCACTGTTCTTGGCCTGGGATTCAATGCGAGGACAATCGTGTCACTGTTCTGCGTCTTCCCGGAGAGGCGCTTTTTGGTCAATTACCGACCGGCATTTTTGGGAACTTGACTCAGCTTCGCACTCTCAGCCTTCGGCTCAACGCCCTTTCCGGTCCGCTCCCATCAGATCTCTCTGCCTGCATTAATCTTCGCAACCTCTATTTGCAAGGTAATGAGTTTTCAGGTCTTGTCCCTGATTTCTTGTTCCAGCTTCATGATCTTGTTCGTCTTAATTTGGCGTCCAATAACTTTTCTGGGGAGATCTCTTCTGGGTTCAACAATTTGACCCGTCTTAGGACGCTGTTCCTCGAGAACAATCGCCTATCTGGGTCTATCCCGGATTTGAAGATCCCTATGGATCAGTTCAATGTTTCCAACAATCAATTAAATGGGTCGGTTCCAAAGGGATTACAGTCGTTTTCTTCGCGTTCCTTTTTGGGCAATTCTCTCTGCGGCCGCCCTCTAGAGGTTTGCGTTGGTGATCTTGTTGTGCCAACAGGGGAGGTTGGGGACAATGGTGGCTCTGGACACAAGAAAAAGCTGTCGGGGGGAGCCATTGCTGGGATTATCATTGGATCTGTACTGGGTTTTGTGTTGATACTTGTAATCTTAATGCTTTTGTGCCGAAAGAAAAGTGCCAAGCAAACGCGTTCAGTCGATTTAGCCACAGTGAAGGTTCCTGAAGTTGAAGTTCAGCCGGGTAAGCCAGTCGGCGATCTTGAAAATGGCGGTCATAGTGATGGTTTTACTGTACCAGCCACTGCCACTGTCACTGCCACTGCCACTGCTGCTGCAACAGCGGCGGCGGCAACAGTGAATGGCAATGGAACTGGGTCTAAAAAATTGGTGTTTTTTGGTAATGCTGCAAGGGTTTTTGATTTGGAGGATCTTTTGAGGGCTTCAGCCGAAGTGTTGGGGAAAGGAACCTTTGGGACTGCTTACAAAGCTGCATTGGAAGTGGGTTCTGTAGTGGCTGTGAAGAGGTTGAAGGATGTCACCATAACTGAGAGGGAATTCAGAGAGAAGGTTGAAGCTGTTGGATCTATGGATCATGAAAACTTGGTCCCTCTCCGGGCTTACTATTTCAGTGCTGACGAGAAGCTTATTGTCTATGATTACATGCCCATGGGAAGCTTATCTGCTCTTCTACACGGAAACAAAGGAGCTGGAAGGACTCCATTGAGTTGGGAAATCAGGTCTGGAATTGCCCTTGGAGCTGCTCGTGGAATTGAATATCTGCATTCACAAGGTCCTAATGTCTCCCATGGAAACATAAAATCGTCGAATATTCTACTAACCAAATCCTACGATGCTCGAGTCTCCGATTTCGGTCTAGCGCATCTTGTTGGACCATCGTCCAGCCCCAACAGAGTAGCTGGTTACCGCGCACCAGAGGTCACTGATCCTCGTAAAGTATCCCATAAGGCTGATGTGTATAGTTTTGGCGTATTGCTATTGGAGCTTTTGACAGGAAAGGCTCCTACCTACTCCCTTTTGAATGAGGAAGGAGTTGATTTACCTAGATGGGTGCAGTCAGTTGTTAGGGAGGAATGGACTTCTGAAGTTTTCGACCTCGAACTTCTTAGGTACCAAAACATCGAGGAGGAAATGGTTCAACTATTGCAGCTTGCAGTCGATTGCGCAGCTCAGTATCCTGACAAGCGCCCCACAATGTCCGAAGTCACAAAGCGTATAGAAGAGCTTCGCCAATCCAGCCTACACGAAGTTGTCAATCCACAACCCGACGCCACTCGTGAATCAGACGACATGTCTTCTAGGTGA | 1989 | 48.16 | MRTQIGTRLLALFLLGFCVLLSTVRPDLGSDRTALLALRSAVGGRTLRLWNVTDQNHCSWPGIQCEDNRVTVLRLPGEALFGQLPTGIFGNLTQLRTLSLRLNALSGPLPSDLSACINLRNLYLQGNEFSGLVPDFLFQLHDLVRLNLASNNFSGEISSGFNNLTRLRTLFLENNRLSGSIPDLKIPMDQFNVSNNQLNGSVPKGLQSFSSRSFLGNSLCGRPLEVCVGDLVVPTGEVGDNGGSGHKKKLSGGAIAGIIIGSVLGFVLILVILMLLCRKKSAKQTRSVDLATVKVPEVEVQPGKPVGDLENGGHSDGFTVPATATVTATATAAATAAAATVNGNGTGSKKLVFFGNAARVFDLEDLLRASAEVLGKGTFGTAYKAALEVGSVVAVKRLKDVTITEREFREKVEAVGSMDHENLVPLRAYYFSADEKLIVYDYMPMGSLSALLHGNKGAGRTPLSWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSSPNRVAGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPTYSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNIEEEMVQLLQLAVDCAAQYPDKRPTMSEVTKRIEELRQSSLHEVVNPQPDATRESDDMSSR | 662 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8615786 | 8618800 | + | CmoCh13G010150.1 | Cmo13g01015 | 395070 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo13g01015 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 372 | 634 | IPR011009 | - | |
Cmo13g01015 | 662 | MobiDBLite | consensus disorder prediction | 639 | 662 | - | - | |
Cmo13g01015 | 662 | PANTHER | OS05G0588300 PROTEIN | 12 | 657 | - | - | |
Cmo13g01015 | 662 | Gene3D | Ribonuclease Inhibitor | 144 | 227 | IPR032675 | - | |
Cmo13g01015 | 662 | SUPERFAMILY | L domain-like | 47 | 212 | - | - | |
Cmo13g01015 | 662 | ProSiteProfiles | Protein kinase domain profile. | 368 | 646 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo13g01015 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 334 | 442 | - | - | |
Cmo13g01015 | 662 | Pfam | Leucine rich repeat | 118 | 177 | IPR001611 | GO:0005515 | |
Cmo13g01015 | 662 | Pfam | Leucine rich repeat N-terminal domain | 29 | 65 | IPR013210 | - | |
Cmo13g01015 | 662 | Gene3D | Ribonuclease Inhibitor | 30 | 141 | IPR032675 | - | |
Cmo13g01015 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 443 | 658 | - | - | |
Cmo13g01015 | 662 | PANTHER | INACTIVE RECEPTOR KINASE-RELATED | 12 | 657 | - | - | |
Cmo13g01015 | 662 | ProSitePatterns | Protein kinases ATP-binding region signature. | 374 | 396 | IPR017441 | GO:0005524 | |
Cmo13g01015 | 662 | Pfam | Protein kinase domain | 371 | 632 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo13g01015 | 662 | CDD | STKc_IRAK | 374 | 637 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00778 | Cmo-Chr1:4050900 | Cmo13g01015 | Cmo-Chr13:8615786 | 0 | dispersed | |
Cmo13g01015 | Cmo-Chr13:8615786 | Cmo14g00844 | Cmo-Chr14:4442207 | 0 | dispersed | |
Cmo13g01015 | Cmo-Chr13:8615786 | Cmo18g00062 | Cmo-Chr18:402885 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74799 | PF00069 | Pkinase | 7.50E-39 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo13g01015 | - | - | csv:101222458 | 1116.29 |