Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo13g01025 | ATGGCAGGTTCACCAAAAAGTCCAGAGTGCGGCGGAGAGGGAGCCCAACCTTCGTCTTCGTTAATGGATAGCTTATTGGGTCTTCTTCGGGTTCGGGTCATTCGCGGCGTCAACCTCGCCGTACGCGACGTCCGCAGCAGCGATCCTTACATTGTCGTTAAAATGTCCAAACAGAAGTTGAAGACCCGCGTTATAAAAAAGGACATCAATCCCGAATGGAACGAGGACCTCACTCTATCTGTTATAGAACCGAACGCTACAGTCAAGCTGACGGTGTACGACCACGACACGTTCAGCATGGACGACAAGATGGGAGTCGCAGAGTTCGAGATCGGACCATTCATCGAAGCATTGCAAATGAACTTAGCAGAGGTACCAAGTGGAACGGTGGTGTCAAGAGTGCAGCCAAGCAGGCAAAATTGCCTAGCTGAAGAGAGCACCATTGTGTGGGAGGATGGCAAGGTTGTTCAAAACATTTGCCTACGCTTGCGCAACGTCGAGCGCGGCGAAGTCGAGATCCAGCTGCTATGGATCGATCTACCCGGTTCTAAAGCTGCATTGACCACGTGCTCCAAGACATGGATGGAACTGAGCGGTTACACGACGGTTGAACCTGGTAAAGAAAAGGAGCGTCTTGAGAAGATACCGGCAAAAACAAAGAAGGCTTGGGGTCCCGCGTGGCGTGTACCCGGCGTCGCTAACTATGTGAATCGCTTCAAGTCTACACTTCTTCTCCAACGCTGTTTATATAAGAAATGA | 759 | 50.86 | MAGSPKSPECGGEGAQPSSSLMDSLLGLLRVRVIRGVNLAVRDVRSSDPYIVVKMSKQKLKTRVIKKDINPEWNEDLTLSVIEPNATVKLTVYDHDTFSMDDKMGVAEFEIGPFIEALQMNLAEVPSGTVVSRVQPSRQNCLAEESTIVWEDGKVVQNICLRLRNVERGEVEIQLLWIDLPGSKAALTTCSKTWMELSGYTTVEPGKEKERLEKIPAKTKKAWGPAWRVPGVANYVNRFKSTLLLQRCLYKK | 252 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 8651244 | 8652684 | - | CmoCh13G010250.1 | Cmo13g01025 | 395080 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo13g01025 | 252 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 27 | 170 | IPR035892 | - | |
| Cmo13g01025 | 252 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE | 14 | 185 | - | - | |
| Cmo13g01025 | 252 | SMART | C2_3c | 28 | 123 | IPR000008 | - | |
| Cmo13g01025 | 252 | CDD | C2_ArfGAP | 26 | 169 | - | - | |
| Cmo13g01025 | 252 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 14 | 185 | IPR044562 | - | |
| Cmo13g01025 | 252 | Gene3D | C2 domain | 23 | 192 | IPR035892 | - | |
| Cmo13g01025 | 252 | ProSiteProfiles | C2 domain profile. | 10 | 127 | IPR000008 | - | |
| Cmo13g01025 | 252 | Pfam | C2 domain | 27 | 113 | IPR000008 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo13g01025 | Cmo18g00057 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo13g01025 | Cmo-Chr13:8651244 | Cmo14g00852 | Cmo-Chr14:4511055 | 1.83E-78 | dispersed | |
| Cmo18g00573 | Cmo-Chr18:5416529 | Cmo13g01025 | Cmo-Chr13:8651244 | 1.12E-36 | dispersed | |
| Cmo10g00353 | Cmo-Chr10:1600544 | Cmo13g01025 | Cmo-Chr13:8651244 | 7.78E-91 | wgd | |
| Cmo11g00319 | Cmo-Chr11:1548827 | Cmo13g01025 | Cmo-Chr13:8651244 | 7.97E-87 | wgd | |
| Cmo13g01025 | Cmo-Chr13:8651244 | Cmo18g00057 | Cmo-Chr18:373965 | 9.64E-101 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo13g01025 | - | - | cmax:111495729 | 444.121 |