Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g01101 ATGTTTGAGCCCCAACATTTCGTCGATTTGCAAGACGACTCTGCTTTCGGCGATCAGAAATCATGGAATTCCGGCGACCACAACGCGTCCCCGACTCGCCGCCTCACTCACTCATCACTCCCAATCCCACCAATTTCAGCTTCCGCAACTACTGCTGCTGGCGCTAATGGCAATGTGGATCGTGAACTCTTCAACAATCTCGTCGAAATCGTACCCCTCGTTCAGTCTCTTATTGATCGGAAAGCGAGCAGTTCATTCAGGAAGCGGGGTTCAATGATTTACACTAAAACACCTTCTAGAGAATCATTACACAGGAAGATGGAACAGAAAGGAAGGCATAATGGCCAATCTATTCCAACCAAGAAGAAGAAAGACCATGGGGACAAGGACCAGGGTAACAATGTTGATAGTAATTCAGATGCCGATGGCTTTTCGGTTTTCTCCTCAAGTTCTCTGGTCTCTGAAAGGGATAAAGGAGAACTAATCACATTGAGAGAACAAGTGGAAGATCTGCGAAAGAAATTGATTGAAAAGGATGAACTTCTAAAATCAGCCGAGATGTCGAAGGACCAGATGAACAACGTTTACGCAAAACTCAATGCTTTGAATCTCCAGTCTGCAGAGAAGGATTCTCGAATAAAGATGATTCATTCCCAACTTTCAGATGCAAAGATTAAGCTTGCAGATAAGCAAGCTGCGTTGGAGAAGATACAATGGGAGGTAATGACATCAAATTCAAAAATAGAAGAACTTCAAGAAGAGCTAAAGTCATCGCAAGGAGACGTTTCATCGTTTATGCTGTTACTCGAAGGCTTGTCAAAGAATGATTGCAATGAACGTGTTGAAGATTATAGTCTTTCAGTGTATCTCCCGGAGAGCTGTCCTTACATTGATGATCTGGACGATCTGAAAATGCAGGAAATGGAAGAAGCAAGACAAGACTATGTAGCTGCTGTTGCTGCTGCAAAGGCAAGGCAAGATGAAGAATCTATTGCTGCTGCTGCAGCTGCAAGTTTAGATGATCAAAACAACCCTCATAGCTTCGGAAGAAATTCTGAGGATTCATCGAGAGAAGAGAAACTAATGGCGACCAAATCCGAGAAATTTTCAGCTGATTTTGTGATGGGTGGTGTCGCCGCGATTGTGGCTAAAAGTGCAGCGGCGCCGATTGAACGGGTCAAGCTTCTGTTGCAGAATCAGGGAGAGATGATAAAGAGAGGGCATCTTAAGAAGCCATATCTGGGCATTCATGACTGTTTCAGAAGAGTTTTGAGAGAAGAAGGGCCGTTGTCACTATGGAGGGGAAATCAGGCTAACGTTATTCGATATTTCCCTACTCAGGCTTTCAACTTTGCATTCAAAGGTTACTTCAAAACGAAATTCGGGCGCTCAAAAGAGAAGGACGGATACATCAAGTGGTTTGCTGGAAATGTTGCTTCAGGAAGTGCTGCAGGAGCAACAACATCGTTTTTTCTGTATCATTTGGATTATGCACGTACTCGACTAGGCACCGATGCAACGGACGGTGGCAGAAACAGCCAGCGCCAATTTAAAGGGTTGCTGGATGTCTACAGAAAAACCTTGTCAAGTGATGGAATTGTTGGTCTATACCGAGGATTTAGTGTTTCAATTGTGGGAATTACTCTGTATAGGGGCATGTATTTTGGGATTTACGACACGTTAAAGCCTCTTGTTCTTGTTGGGCAGTTTGAGGGGAACTTTTTTGCTAGTTTCTTATTGGGGTGGAGTATCACAACATTTTCTGGGGTATGCGCTTATCCTTTCGACACGCTGCGACGAAGAATGATGCTTACCTCTGGACAAACCCTGAAGTACCGCAGTGCTTTACATGCATTCTCCGAGATCATTCGCCATGAGGGTATCGCTGCTCTTTTTCGAGGAGTCACTGCCAATATGCTTGTTGGTGTTGCAGGGGCTGGTGTTCTTGCAGGTTATGATCAACTGCACGAAATTGCATGTCGACATGGTTACTCCTATGGCGGGCAACAACATCAAATAGCCTCGAAATGA 2031 44.51 MFEPQHFVDLQDDSAFGDQKSWNSGDHNASPTRRLTHSSLPIPPISASATTAAGANGNVDRELFNNLVEIVPLVQSLIDRKASSSFRKRGSMIYTKTPSRESLHRKMEQKGRHNGQSIPTKKKKDHGDKDQGNNVDSNSDADGFSVFSSSSLVSERDKGELITLREQVEDLRKKLIEKDELLKSAEMSKDQMNNVYAKLNALNLQSAEKDSRIKMIHSQLSDAKIKLADKQAALEKIQWEVMTSNSKIEELQEELKSSQGDVSSFMLLLEGLSKNDCNERVEDYSLSVYLPESCPYIDDLDDLKMQEMEEARQDYVAAVAAAKARQDEESIAAAAAASLDDQNNPHSFGRNSEDSSREEKLMATKSEKFSADFVMGGVAAIVAKSAAAPIERVKLLLQNQGEMIKRGHLKKPYLGIHDCFRRVLREEGPLSLWRGNQANVIRYFPTQAFNFAFKGYFKTKFGRSKEKDGYIKWFAGNVASGSAAGATTSFFLYHLDYARTRLGTDATDGGRNSQRQFKGLLDVYRKTLSSDGIVGLYRGFSVSIVGITLYRGMYFGIYDTLKPLVLVGQFEGNFFASFLLGWSITTFSGVCAYPFDTLRRRMMLTSGQTLKYRSALHAFSEIIRHEGIAALFRGVTANMLVGVAGAGVLAGYDQLHEIACRHGYSYGGQQHQIASK 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9042063 9047588 + CmoCh13G011010.1 Cmo13g01101 395156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g01101 676 Coils Coil 220 261 - -
Cmo13g01101 676 ProSiteProfiles Solute carrier (Solcar) repeat profile. 572 658 IPR018108 -
Cmo13g01101 676 MobiDBLite consensus disorder prediction 118 135 - -
Cmo13g01101 676 SUPERFAMILY Mitochondrial carrier 367 655 IPR023395 -
Cmo13g01101 676 MobiDBLite consensus disorder prediction 336 359 - -
Cmo13g01101 676 Pfam Mitochondrial carrier protein 367 463 IPR018108 -
Cmo13g01101 676 Pfam Mitochondrial carrier protein 473 565 IPR018108 -
Cmo13g01101 676 Pfam Mitochondrial carrier protein 573 658 IPR018108 -
Cmo13g01101 676 PRINTS Adenine nucleotide translocator signature 577 593 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo13g01101 676 PRINTS Adenine nucleotide translocator signature 369 381 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo13g01101 676 PRINTS Adenine nucleotide translocator signature 413 434 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo13g01101 676 PRINTS Adenine nucleotide translocator signature 446 458 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo13g01101 676 PRINTS Adenine nucleotide translocator signature 472 485 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo13g01101 676 ProSiteProfiles Solute carrier (Solcar) repeat profile. 472 564 IPR018108 -
Cmo13g01101 676 Gene3D Mitochondrial carrier domain 370 664 IPR023395 -
Cmo13g01101 676 ProSiteProfiles Solute carrier (Solcar) repeat profile. 367 460 IPR018108 -
Cmo13g01101 676 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 362 669 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo13g01101 676 MobiDBLite consensus disorder prediction 16 38 - -
Cmo13g01101 676 MobiDBLite consensus disorder prediction 13 38 - -
Cmo13g01101 676 Coils Coil 305 325 - -
Cmo13g01101 676 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 362 669 - -
Cmo13g01101 676 Coils Coil 154 202 - -
Cmo13g01101 676 MobiDBLite consensus disorder prediction 89 142 - -
Cmo13g01101 676 PRINTS Mitochondrial carrier protein signature 372 385 IPR002067 GO:0055085
Cmo13g01101 676 PRINTS Mitochondrial carrier protein signature 581 603 IPR002067 GO:0055085
Cmo13g01101 676 PRINTS Mitochondrial carrier protein signature 435 455 IPR002067 GO:0055085
Cmo13g01101 676 PRINTS Mitochondrial carrier protein signature 487 505 IPR002067 GO:0055085
Cmo13g01101 676 PRINTS Mitochondrial carrier protein signature 537 555 IPR002067 GO:0055085
Cmo13g01101 676 PRINTS Mitochondrial carrier protein signature 385 399 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g01101 Cmo-Chr13:9042063 Cmo19g01035 Cmo-Chr19:9038739 2.59E-125 dispersed
Cmo18g00018 Cmo-Chr18:72583 Cmo13g01101 Cmo-Chr13:9042063 0 transposed
Cmo13g01101 Cmo-Chr13:9042063 Cmo18g00017 Cmo-Chr18:70330 8.54E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g01101 K05863 - csv:101207715 551.977