Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo13g01109 | ATGTCTTTAGAGCATGAATTTCTGTTTGTTCCGGCATCTGGGTTTGCCTCAACAATGGCAAATAATGTGAATCTCTTTCTTTGTTTCCTTCTCTTTGTGGCTGTTTTTGGCCTTTGCCTTAGCCCCGGTGGTCTAGCTTGGGCTCTGGTTTCAAGGCCAAGAAACAAACCCATCATTCCTGGCCCTTGTGGCACTCCTTTTTTAGGTCAAGTTTTTACCTTTACTACTTCTCTCACTCATAGAGTTCTTGCCAACCTCGCCCATACCTTAAAGGCCAAATCTTTGATGTCATTCTCTGTTGGGTTCACTCGTTTTGTGATCTCTAGCAACCCCATCACTGCCAAAGAGCTTTTGAACAGCTCGGCGTTTGCTGATCGTCCCATTAAGGAGTCAGCTTACGAGCTTTTGTTCCATAGAGCAATGGGGTTCGCTCCATATGGGGAGTATTGGAGGAACCTTAGGAGAATCTCAGCCACTCATTTGTTTAGCCCCAAAAGGATATCTAATTTTGGGGAATTGAGGCAGAGAATTGGGGTTGAAATGGTGGAGGAAATTAAGGGTTTGATGGAAAAAAATGGGGAAATTGAAGTGAGGAAGGTTTTGCATTTTGGGTCGTTGAATAATGTTATGGGGAGTGTGTTTGGGAAAAGGTATGAGTTTTTTGGTGATGGTGGGAGTAATTGCGAGGTTGAGGGATTGGTGAGTGAAGGGTATGATTTGCTTGGGAGTTTCAATTGGAGTGATCACTTCCCTGTTTTGGGTTGGTTGGATTTGCAAGGCGTGAGGAAAAGGTGTAAAATTTTGGTGGGGAAAGTGAATGTTTTTGTTGGGAAAATCATAGAAGATCATAGAATGAATAGAAAAGGAAAGGGTGTTGTTGTTCATAATGATAATGACGATGAAGATGATGACACCAAATCTGGAGATTTCGTTGATGTATTGCTTGATTTGGAAAAGGAAAACAAGCTCACCGACTCTGATATGATTGCTGTGTTATGGGAAATGATCTTCCGAGGAACAGACACGGTGGCGATTCTCCTAGAATGGATATTAGCCAGAATGGTTCTTCATCCCGACATCCAATCCAAACTCCAATCGGAAATCGACCGCGTTGTTATACCCGGCCGGAATGTCTCCGATTCCGACCTCCCAAATCTCCCTTATCTCCATGCAGTCGTTAAAGAGACTCTACGAATGCACCCTCCTGGCCCACTTCTCTCGTGGGCCCGCCTCGCCATCCACGACACCCACGTCGGCGGTCACTTCATTCCCGCCGGTACTACGGCGATGGTCAACATGTGGGCCATAACCCACGACCAACATATCTGGTCCGACCCGACAACATATGACCCGGAGAGGTTCCTTAAAGAGGAGGTGGCTATAATGGGGTCTGACTTACGGCTAGCACCGTTTGGATCTGGAAGACGGGTGTGCCCTGGGAAAGCCATGGGGTTAGCCACTGTGGAGCTTTGGCTAGCTCAGTTGGTTCACAGGTTCAAATGGGTTCAGGTGAATGGTGGGTGTGGAAATGGCGTGGACTTGTCCGAGTGTTTGAAGCTGTCGCTGGAGATGAAACAGCCTTTGATCTGTAGGGCTGTTCCGAGGTTTTAG | 1611 | 46.68 | MSLEHEFLFVPASGFASTMANNVNLFLCFLLFVAVFGLCLSPGGLAWALVSRPRNKPIIPGPCGTPFLGQVFTFTTSLTHRVLANLAHTLKAKSLMSFSVGFTRFVISSNPITAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFSPKRISNFGELRQRIGVEMVEEIKGLMEKNGEIEVRKVLHFGSLNNVMGSVFGKRYEFFGDGGSNCEVEGLVSEGYDLLGSFNWSDHFPVLGWLDLQGVRKRCKILVGKVNVFVGKIIEDHRMNRKGKGVVVHNDNDDEDDDTKSGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQSKLQSEIDRVVIPGRNVSDSDLPNLPYLHAVVKETLRMHPPGPLLSWARLAIHDTHVGGHFIPAGTTAMVNMWAITHDQHIWSDPTTYDPERFLKEEVAIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLVHRFKWVQVNGGCGNGVDLSECLKLSLEMKQPLICRAVPRF | 536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 9082814 | 9084507 | - | CmoCh13G011090.1 | Cmo13g01109 | 395164 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo13g01109 | 536 | PRINTS | P450 superfamily signature | 338 | 355 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PRINTS | P450 superfamily signature | 391 | 402 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PRINTS | P450 superfamily signature | 469 | 478 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 8 | 535 | - | - | |
Cmo13g01109 | 536 | Pfam | Cytochrome P450 | 60 | 503 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 471 | 480 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo13g01109 | 536 | PRINTS | E-class P450 group I signature | 204 | 222 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PRINTS | E-class P450 group I signature | 327 | 344 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PRINTS | E-class P450 group I signature | 347 | 373 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PRINTS | E-class P450 group I signature | 390 | 408 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PRINTS | E-class P450 group I signature | 468 | 478 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PRINTS | E-class P450 group I signature | 478 | 501 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | PANTHER | CYTOCHROME P450 78A7-RELATED | 8 | 535 | - | - | |
Cmo13g01109 | 536 | Gene3D | Cytochrome P450 | 48 | 531 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo13g01109 | 536 | SUPERFAMILY | Cytochrome P450 | 59 | 535 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g00479 | Cmo-Chr5:2236593 | Cmo13g01109 | Cmo-Chr13:9082814 | 0 | dispersed | |
Cmo08g00824 | Cmo-Chr8:5248033 | Cmo13g01109 | Cmo-Chr13:9082814 | 1.28E-174 | dispersed | |
Cmo13g01109 | Cmo-Chr13:9082814 | Cmo18g00685 | Cmo-Chr18:8754063 | 0 | dispersed | |
Cmo13g01109 | Cmo-Chr13:9082814 | Cmo12g00085 | Cmo-Chr12:453319 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo13g01109 | K20619 | - | csv:101203458 | 846.269 |