Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo13g01125 | ATGCCGGCTCCAGTGCTGGCGCCCCCAAAAACTCCAGTGGGAGATGCAGTATTGGGAAGGGAATTGGTAGTTGTGAGGGTCGATGGTGGTGGCCTTGTGACAGGCGATGTCATTCCCGTGTTTGGTTATGAAGCAGTGAAAATGTTGTTTCAGATTCCCCGATTGACCAGTTCCCTCAGGGAGCCATTCGATGTCGACCAGGCGTATCTCCATCGCAAGCTCCTTCTTCAGAATCACAAACCGACCCATTCTGTAACTTCATCTGGCGAGTCAGAGCTTGCACGGAGGATAGTGTATCAATGGGATGAAGCATCCTTTGAAGTTCGACAAGCCTATAAGCAGTTCATTGCGGGAGTTGTTGGATTGGTGGACAGAGAAGTACCATCGGAGGAGCTTGGTGAGGTAGCGCTGACTATTTATCGCCTTTTTGGAGAGCAAAAAGAAGAGAATGATCTCAACTGGACAGCTAAAAACAAAGAAGAACTGCAAAAGCTTATTGGCCATACAGTTTCAGACGCTAGGCTGCAGAAAGTTGTTTCTCTAGCTCAGAAACTATTTACTTTGCAGCCAAGGGATCATGCAACTACATTTCTGGCAGAGAAGCATGTTAATAAGGGTGACTCCGAAGTAGAGTTTGGCGCTGATCTTGTGTTTAGAGAACCTGCTAGGTTTATGGTGGATGTGTCACTGGAAAATTCAGATTTACTGGGCAAGGATTTTACTGCACCTACATTTTATGACAGACAACATGTGCATGATGATTCCATTAACTTTGATCTCTCTAATGAAAGAGGAAAGTTAAATTTGAGTTGGTTGAGGGATGCATGTGATGAGATAACCAGAAAAAGTACCTCACAACTTTCCACTGATGAACTTGCAATGGCTATTTGCCGAGTCCTTGATTCAGAAAAACCTGGCGAGGAGATAGCTGCAGATCTATTGGATCTTGTTGGTGATGGAGCATTTGAGTTTGTTCAAGATCTTATATCACACCGAAGGGAACTTGTGAATGATATTCATCACGGGTTAACAATAATAAAATCCGAAAAAACGACTTCAAGCTCTCAGTCACGAATGCCTAGCTATGGAACTCAGGTTACTGTTCAAACAGAGTCAGAAAGACAAATTGATAAGCTTCGACGTAAAGAGGAAAAGCGAAATAAACGAGGAATTGACTATGGTACTGATAGTGATTTCTCTGCTATAAGCTTTTCTTCTCTAGTTCAAGCAAGTCAAAGGAAAAGTCCATTTGACGATCTTATTGGTTCTGGTGAGGGCGCTAACTCCCTTACTGTTGGTGCCCTTCCTCAAGGAACACAAAGAAAGCATTTTAAGGGATATGAGGAGGTTATTATCCCCCCAATCCCAGCAGCACAAATGAAACCTGGAGAAAAGCTGATTGAAATAACGGAGTTGGATGATTTTGCTCAAGCTGCTTTTCGTGGATTCAAATACTTAAATCGTATACAGAGTCGCATTTTTGACACTGTTTATAACACCAACGAGAATATACTAGTCTGTGCTCCAACAGGAGCTGGGAAAACTAATATAGCCATGATCTCCATTCTCCACGAGATTTCACAGCATTTCAAGGATGGATATTTGCATAAAGATGAATTTAAGATAGTTTATGTTGCTCCTATGAAGGCGCTGGCTGCAGAGGTCACATCTACTTTTAGCCATCGCTTATCTCCCTTGAATGTTATTGTAAGAGAACTAACTGGAGACATGCAACTTTCGAAGAATGAACTTGAAGAAACTCAGATGATAGTGACAACACCTGAGAAATGGGATGTCATAACTCGCAAAAGCAGCGATATGTCACTGTCGATGTTAGTCAAACTCTTAATTATTGATGAGGTACATCTTCTAAATGATGACCGAGGGCCTGTAATTGAGGCACTAGTTGCACGAACTCTTCGTCAGGTGGAGTCAACACAATCAATGATACGTATTGTTGGCCTTTCAGCCACCCTGCCTAATTACTTAGAGGTTGCACAGTTTCTTAGAGTGAGTCCTGGAACAGGACTTTTCTTCTTTGATTCTAGCTATCGTCCTGTGCCTCTTGCACAACAATATATTGGTATCAGCGAGCACAACTTTGCAGCTCGCAATGAATTGTTAAATGAAATATGCTATAAGAAGGTTGTTGATTCATTGAAGCATGGGCATCAAGCAATGGTGTTTGTTCATTCCCGAAAGGACACAGCAAAAACAGCTGAGAAATTGGTTGAACTTGGCCGAAAGTATGATGATCTTGAGCTATTTAAGAATGATGCGCACCCACAGTTTGGTATTATCAAGAAAGAAGTCATCAAATCCAGGAATAAAGATCTCGTAGAACTTTTTGATCATGGGATTGGTGTACATCATGCTGGAATGCTACGTTCTGATAGAGGTTTAACTGAAAAGCTTTTCTCTGATGGACTATTGAAGGTTCTTGTTTGTACAGCCACCTTAGCATGGGGTGTAAATCTTCCCGCTCATACGGTTGTTATAAAGGGCACCCAATTATATGATCCAAAAGCTGGTGGATGGCGAGATTTGGGTATGCTTGATGTCATGCAGATTTTTGGACGAGCTGGGAGACCTCAGTTTGACAAAAGTGGTGAAGGCATCATAATTACATCTCATGATAAACTTGCCCATTATTTGCGATTGCTCACAAGTCAGCTCCCTATAGAGAGTCAGTTTATTGGTTCTTTGAAAGATAATTTGAATGCGGAGGTTGCACTGGGTACTGTAACGAATGTAAAGGAAGCTTGTGCCTGGCTTGGATATACATATCTCTTTATAAGGATGAGACTAAATCCTCTGGCATATGGTATTGGATGGGATGAGGTCATGGCCGATCCATCTATGAGTTCAAAGCAAAGAGATCTCATAACAGATGCTGCACGTGCGCTTGACAAATCAAAGATGATGCGTTTTGATGAAAAAAGTGGCAACTTTTATTGTACAGAGCTGGGCCGCATTGCCAGCCACTTCTATATTCAGTATTCCAGTGTTGAGACGTATAACGAGATGTTGCGACGTCACATGAATGACAGTGAGATTATTGACATGGTTGCTCATTCTTCTGAGTTTGAAAATATTGTTGTTCGAGATGAGGAGCAGAGTGAGCTGGAGATGTCAGTACGAACATCATGTCCCTTAGAAGTTAAGGGTGGCCCATCAAATAAACATGGAAAAATTTCCATCCTTATTCAGTTGTACATTTCCCGAGGTTCCATCGATTCCTTCTCGCTAGTCTCTGATGCTGCTTATATAAGTGCTAGCTTGGCTCGAATTATGCGAGCTCTATTTGAAATATGTTTGAGAAGGGGTTGGTGTGAAATGACATTGTTCATGTTGGAATACTGCAAAGCTGTTGATCGTCGAATATGGCCACACCAACATCCTCTAAGACAATTTGACAAGGATCTTTCTTTAGATATATTGCGTAAGCTTGAGGAGCGAGAGGCCGACCTGGATCGTCTGCAAGAGATGCAGGAAAAAGACATAGGAGCACTGATCCGTTATGTACCTGGTGGAAGATTGGTTAAGCAGTATTTAGGATATTTTCCACTCATCCAGTTATCAGCAACTGTCAGTCCAATAACAAGAACAGTCCTAAAGGTTGAGGTGCTCATAACGGCCGATTTTACATGGAAAGATCGTTTTCATGGTGGTTCACAACGCTGGTGGATACTAGTTGAGGACACAGAGAATGACCACATCTATCACTCTGAACTTTTCACGCTGGCAAAGAAGAAAGCTAGAGAGCCTCAAAAGCTTTCCTTTACTGTCCCAATATTTGAGCCACATCCACCTCAATATTATATTCATGCCGTTTCTGACTCCTGGCTGCAAGCAGAAGCATTTTACACTATATCTTTCCAAAATTTAGCATTGCCGGAGGCCAGTACGTCACACACTGAGCTCCTAGATTTGAAACCTCTTCCAATAACTGCGCTTGGTAACAGAAGTTACGAATCCTTGTATAAATTTTCACATTTTAATCCAATACAAACACAGATTTTTCATATGTTATATCATACAGATGATAACATTCTGTTGGGTGCTCCCACTGGGAGTGGAAAAACCATATCTGCTGAACTTGCTATGCTTCGCCTCTTCAATACTCAGCCTGATATGAAGGTTGTCTACATAGCACCTTTGAAGGCCATTGTTCGTGAAAGAATGAATGACTGGAAAAATTGTCTTGTTTCTCGGCTTCACAAAAAAATGGTTGAAATGACGGGAGATTATACCCCTGATTTGATGGCACTTTTGTCAGCTGATATTATAATATCAACCCCTGAAAAGTGGGATGGTATTAGTCGAAATTGGCATAGCCGAAGTTATGTTACAAAGGTTGGACTAATGATTTTGGATGAGATCCACTTATTGGGAGCAGATCGAGGACCCATTCTTGAGGTTATTGTTTCAAGGATGAGGTATATATCATCACAGACTGAGAGAAAAGTTAGATTTGTAGGCCTCTCAACTGCTTTAGCGAACGCAAGCAATTTGGGTGACTGGTTGGGTGTTGGAGAAAATGGACTTTTCAATTTCAAACCAAGCGTAAGGCCAGTGCCTCTTGAAGTTCATATCCAGGGATATCCTGGAAAGTTCTACTGCCCTAGGATGAACAGTATGAATAAACCAACTTATGCTGCCATCTGCACACATTCCCCAACCAAGCCAGTTCTTATATTCGTCTCATCTCGTCGTCAGACAAGACTCACAGCATTGGATCTTATTCAGTTTGCAGCTTCAGATGAGCATCCTAGACAATTTATAAATATGGCCGAAGAAGAGCTTCAGATGATCCTTTGTCAAGTTATTGATCAGAATCTCAGGCACACCTTGCAATTTGGTATCGGGCTACACCATGCAGGTCTAAATGATGGGGATAGGTCTATGGTTGAGGAGCTGTTTGCAAACAACAAAATTCAGGTATTGGTTTGTACTAGCACATTGGCTTGGGGTGTGAACCTTCCTGCACATCTAGTTATTATCAAGGGAACAGAATACTATGATGGAAAATCCAAGAGATACGTTGATTTTCCAATCACAGATATTCTGCAAATGATGGGTCGTGCAGGTCGACCACAGTATGATCAACATGGAAAAGCAGTTATTCTTGTTCATGAACCCAAAAAGAGCTTTTATAAAAAGTTTTTGTACGAACCATTCCCTGTTGAGAGCAGTCTGAAGGAGCAGTTGCATGACCATATCAATGCTGAGATAGTTTCGGGCACCATTTGTCATAAAGAGGATGCAGTGCACTATCTTACCTGGACATATTTGTTTCGTAGGCTGATGGTAAATCCTGCTTACTATGGACTTGATAGCATGGAACCTGAAACTCTAAGTTCGTACTTATCTAGTTTAGTACAAAGTACATTTGAGGATCTTGAGGATAGTGGATGCATAAAGATGGATGAAAACAGTGTGGAGCCAACGATGCTGGGCTCAATAGCATCTCAGTATTACCTCAGCTACATTACTTTATCCATGTTTGGCTCAAATATAGGTCCAGATACGTCACTTGAAGTATTTTTGCATATCCTTTCTGCTGCCTCAGAATATGATGAGCTTCCTGTGCGGCATAATGAGGAAAATTACAATGCTGCTCTATCCGAGAGAGTTCGATATGCAGTGGACAAAGATCGACTTGATGATCCACATGTGAAGACAAATTTACTTTTTCAGGCACATTTTTCTCAGTTGGAATTACCAATCAGTGACTACATTACCGACTTAAAATCGGTGTTGGATCAAAGTATACGCATTATTCAGGCCATGATTGATATCTGTGCCAACAGTGGATGGTTGTCAAGCTCGATTACTTGCATGCGTCTGTTGCAAATGGTCATGCAGGGTTTGTGGTTTGATGTAGATTCTGCATTGTGGATGCTGCCATGCATGAACGATGACCTTGCAAGTTCACTTAAAAAATCGGGATATCTTACTCTGCAGCAACTGTTGGATCTTCCTAAGACAACTTTGCAAAATTTGATTGGAAACTTTCCTGCATCAAAATTATCTCAGGATTTGCAGAATTTTCCTCGTGTCCAAATGAAGATAAAACTTCAAAGGAGGGACGAGGATGTTGAAAAACCTCCCTCTCTTCACATAAGACTGGAGAAGATAAGTTCGAGGAAAAACCGATCCAGGGCATATGCACCACGCTTTCCCAAGATAAAAGATGAAGCATGGTGGCTCGTACTTGGTAACACTGCTACGTCGGAACTGTATGCTATAAAGAGAGTTTCTTTCTCTGATCGCCTGGTCACAACCATGCAGTTGCCTCCAAAAAGAACTGATTTCCAGGAAATGAAGCTGATTTTGGTCTCAGATTGTTATCTTGGTTATGAGCAAGAGTACTCCATTAAAGAAGTGATAAGTGGAAGCAGTTGA | 6408 | 41.6 | MPAPVLAPPKTPVGDAVLGRELVVVRVDGGGLVTGDVIPVFGYEAVKMLFQIPRLTSSLREPFDVDQAYLHRKLLLQNHKPTHSVTSSGESELARRIVYQWDEASFEVRQAYKQFIAGVVGLVDREVPSEELGEVALTIYRLFGEQKEENDLNWTAKNKEELQKLIGHTVSDARLQKVVSLAQKLFTLQPRDHATTFLAEKHVNKGDSEVEFGADLVFREPARFMVDVSLENSDLLGKDFTAPTFYDRQHVHDDSINFDLSNERGKLNLSWLRDACDEITRKSTSQLSTDELAMAICRVLDSEKPGEEIAADLLDLVGDGAFEFVQDLISHRRELVNDIHHGLTIIKSEKTTSSSQSRMPSYGTQVTVQTESERQIDKLRRKEEKRNKRGIDYGTDSDFSAISFSSLVQASQRKSPFDDLIGSGEGANSLTVGALPQGTQRKHFKGYEEVIIPPIPAAQMKPGEKLIEITELDDFAQAAFRGFKYLNRIQSRIFDTVYNTNENILVCAPTGAGKTNIAMISILHEISQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVIVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQSMIRIVGLSATLPNYLEVAQFLRVSPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARNELLNEICYKKVVDSLKHGHQAMVFVHSRKDTAKTAEKLVELGRKYDDLELFKNDAHPQFGIIKKEVIKSRNKDLVELFDHGIGVHHAGMLRSDRGLTEKLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRLLTSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDEVMADPSMSSKQRDLITDAARALDKSKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEIIDMVAHSSEFENIVVRDEEQSELEMSVRTSCPLEVKGGPSNKHGKISILIQLYISRGSIDSFSLVSDAAYISASLARIMRALFEICLRRGWCEMTLFMLEYCKAVDRRIWPHQHPLRQFDKDLSLDILRKLEEREADLDRLQEMQEKDIGALIRYVPGGRLVKQYLGYFPLIQLSATVSPITRTVLKVEVLITADFTWKDRFHGGSQRWWILVEDTENDHIYHSELFTLAKKKAREPQKLSFTVPIFEPHPPQYYIHAVSDSWLQAEAFYTISFQNLALPEASTSHTELLDLKPLPITALGNRSYESLYKFSHFNPIQTQIFHMLYHTDDNILLGAPTGSGKTISAELAMLRLFNTQPDMKVVYIAPLKAIVRERMNDWKNCLVSRLHKKMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERKVRFVGLSTALANASNLGDWLGVGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFINMAEEELQMILCQVIDQNLRHTLQFGIGLHHAGLNDGDRSMVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEQLHDHINAEIVSGTICHKEDAVHYLTWTYLFRRLMVNPAYYGLDSMEPETLSSYLSSLVQSTFEDLEDSGCIKMDENSVEPTMLGSIASQYYLSYITLSMFGSNIGPDTSLEVFLHILSAASEYDELPVRHNEENYNAALSERVRYAVDKDRLDDPHVKTNLLFQAHFSQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWFDVDSALWMLPCMNDDLASSLKKSGYLTLQQLLDLPKTTLQNLIGNFPASKLSQDLQNFPRVQMKIKLQRRDEDVEKPPSLHIRLEKISSRKNRSRAYAPRFPKIKDEAWWLVLGNTATSELYAIKRVSFSDRLVTTMQLPPKRTDFQEMKLILVSDCYLGYEQEYSIKEVISGSS | 2135 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 9154080 | 9178437 | + | CmoCh13G011250.1 | Cmo13g01125 | 395180 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo13g01125 | 2135 | Gene3D | - | 686 | 888 | IPR027417 | - | |
| Cmo13g01125 | 2135 | CDD | DEXHc_ASCC3_2 | 1332 | 1520 | - | - | |
| Cmo13g01125 | 2135 | Gene3D | - | 895 | 985 | IPR036388 | - | |
| Cmo13g01125 | 2135 | Coils | Coil | 1147 | 1167 | - | - | |
| Cmo13g01125 | 2135 | Gene3D | - | 474 | 685 | IPR027417 | - | |
| Cmo13g01125 | 2135 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 445 | 670 | IPR027417 | - | |
| Cmo13g01125 | 2135 | SUPERFAMILY | Sec63 N-terminal domain-like | 1014 | 1189 | - | - | |
| Cmo13g01125 | 2135 | SUPERFAMILY | Winged helix DNA-binding domain | 893 | 998 | IPR036390 | - | |
| Cmo13g01125 | 2135 | Pfam | DEAD/DEAH box helicase | 488 | 661 | IPR011545 | GO:0003676|GO:0005524 | |
| Cmo13g01125 | 2135 | Gene3D | - | 1525 | 1729 | IPR027417 | - | |
| Cmo13g01125 | 2135 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 712 | 910 | IPR001650 | - | |
| Cmo13g01125 | 2135 | CDD | SF2_C_Ski2 | 685 | 876 | - | - | |
| Cmo13g01125 | 2135 | SUPERFAMILY | Sec63 N-terminal domain-like | 1849 | 2005 | - | - | |
| Cmo13g01125 | 2135 | MobiDBLite | consensus disorder prediction | 373 | 392 | - | - | |
| Cmo13g01125 | 2135 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 495 | 677 | IPR014001 | - | |
| Cmo13g01125 | 2135 | SUPERFAMILY | E set domains | 2003 | 2128 | IPR014756 | - | |
| Cmo13g01125 | 2135 | CDD | DEXHc_ASCC3_1 | 486 | 681 | - | - | |
| Cmo13g01125 | 2135 | Gene3D | - | 1730 | 1822 | IPR036388 | - | |
| Cmo13g01125 | 2135 | MobiDBLite | consensus disorder prediction | 350 | 372 | - | - | |
| Cmo13g01125 | 2135 | MobiDBLite | consensus disorder prediction | 350 | 392 | - | - | |
| Cmo13g01125 | 2135 | Pfam | Sec63 Brl domain | 986 | 1292 | IPR004179 | - | |
| Cmo13g01125 | 2135 | Gene3D | - | 1131 | 1185 | - | - | |
| Cmo13g01125 | 2135 | SUPERFAMILY | Winged helix DNA-binding domain | 1728 | 1828 | IPR036390 | - | |
| Cmo13g01125 | 2135 | SMART | AAA_5 | 1347 | 1497 | IPR003593 | - | |
| Cmo13g01125 | 2135 | SMART | AAA_5 | 500 | 844 | IPR003593 | - | |
| Cmo13g01125 | 2135 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1519 | 1728 | IPR027417 | - | |
| Cmo13g01125 | 2135 | Gene3D | - | 1823 | 1959 | - | - | |
| Cmo13g01125 | 2135 | PANTHER | SEC63 DOMAIN-CONTAINING | 475 | 518 | - | - | |
| Cmo13g01125 | 2135 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 680 | 893 | IPR027417 | - | |
| Cmo13g01125 | 2135 | Gene3D | C2 domain | 2017 | 2132 | IPR035892 | - | |
| Cmo13g01125 | 2135 | PANTHER | ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3 | 475 | 518 | - | - | |
| Cmo13g01125 | 2135 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1342 | 1517 | IPR014001 | - | |
| Cmo13g01125 | 2135 | CDD | SF2_C_Ski2 | 1524 | 1712 | - | - | |
| Cmo13g01125 | 2135 | Pfam | Sec63 Brl domain | 1816 | 2127 | IPR004179 | - | |
| Cmo13g01125 | 2135 | SMART | helicmild6 | 773 | 865 | IPR001650 | - | |
| Cmo13g01125 | 2135 | SMART | helicmild6 | 1608 | 1700 | IPR001650 | - | |
| Cmo13g01125 | 2135 | Gene3D | C2 domain | 1188 | 1296 | IPR035892 | - | |
| Cmo13g01125 | 2135 | PANTHER | ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3 | 516 | 2129 | - | - | |
| Cmo13g01125 | 2135 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1220 | 1517 | IPR027417 | - | |
| Cmo13g01125 | 2135 | Gene3D | - | 987 | 1129 | - | - | |
| Cmo13g01125 | 2135 | Gene3D | - | 1297 | 1524 | IPR027417 | - | |
| Cmo13g01125 | 2135 | SMART | ultradead3 | 1329 | 1533 | IPR014001 | - | |
| Cmo13g01125 | 2135 | SMART | ultradead3 | 482 | 693 | IPR014001 | - | |
| Cmo13g01125 | 2135 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1571 | 1757 | IPR001650 | - | |
| Cmo13g01125 | 2135 | Pfam | DEAD/DEAH box helicase | 1335 | 1500 | IPR011545 | GO:0003676|GO:0005524 | |
| Cmo13g01125 | 2135 | Pfam | Helicase conserved C-terminal domain | 1600 | 1698 | IPR001650 | - | |
| Cmo13g01125 | 2135 | Pfam | Helicase conserved C-terminal domain | 718 | 863 | IPR001650 | - | |
| Cmo13g01125 | 2135 | SMART | Sec63_2 | 986 | 1293 | IPR004179 | - | |
| Cmo13g01125 | 2135 | SMART | Sec63_2 | 1816 | 2129 | IPR004179 | - | |
| Cmo13g01125 | 2135 | PANTHER | SEC63 DOMAIN-CONTAINING | 516 | 2129 | - | - | |
| Cmo13g01125 | 2135 | PIRSF | BRR2 | 62 | 2134 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo13g01125 | K18663 | ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4] | - | csv:101222457 | 3954.83 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo01g02106 | Cmo-Chr1:14562333 | Cmo13g01125 | Cmo-Chr13:9154080 | 0 | dispersed | |
| Cmo04g02824 | Cmo-Chr4:20220589 | Cmo13g01125 | Cmo-Chr13:9154080 | 9.31E-76 | dispersed | |
| Cmo05g00632 | Cmo-Chr5:3185501 | Cmo13g01125 | Cmo-Chr13:9154080 | 1.87E-27 | dispersed | |
| Cmo13g01125 | Cmo-Chr13:9154080 | Cmo17g00449 | Cmo-Chr17:3052046 | 1.64E-22 | dispersed | |
| Cmo13g01125 | Cmo-Chr13:9154080 | Cmo18g01308 | Cmo-Chr18:12514598 | 2.19E-08 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi17g647 | . | Blo16g00171 | . | . | . | Bpe13g00309 | Bma06g00154 | . | Cmo13g01125 | . | . | . | . | . | . | Cpe20g00069 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone2ag0807 | . | . | . | Lsi02g00115 | Csa01g00593 | Chy12g01505 | Cme12g01949 | . | . | Bda11g01720 | . | . | . | . | . | . | . | . | Cma13g01078 | . | Car13g00915 | . | . | . | Bhi08g01095 | . | . | . | . | . | . | Cla04g01159 | Cam04g1218 | Cec01g1729 | Cco01g1775 | Clacu04g1245 | Cmu04g1224 | Cre01g1520 | . | . | . | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0009577 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 32 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cmo13g01125 | Cmo_Chr13 | FPKM | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |