Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo13g01199 ATGAAGTTTAAATCCACTAACCGTTCATTCAATTCATACCCAGATGAAAATCATGCAAGTATTAGGAGATTGATGAGGCACACTGAGGATGATCACAAGAACCTATGGGACAAGGATCCGCTCAGCGATTTGAAGAACAACCAGGAAATGAAATGTGGGTTCAGTTCGATTCGAGTAATGGGTATGTTTGCGGTTTTAATGATGTTCATTTCTGTGGTCTTTTCTGTCTCTGTGGTTCTTAGAGACCCACCATCCGATGCTGTAATTGAAGGTTCAGATGTGTGGATTCCTCAGTGGAACTCCGACCCAGTAGATTCTAAGGATGGAGATCTTCATAGGGATATAGAGGCAGTTGATAAACTGCTTAGTGGCCTTCTTTCTGCCAAACATGAGGAAGGTTCTTGTCTTAGTAGGTACAATTCAGCTTCATATCAACGCAAGCTGGCGTACCAACCCTCTTCTTACCTGATCTCCAAATTGCGGAGTTATGAAGATCTTCATAAGCGTTGTGGAGTCTACACTGAGTCTTACAACAAAACTTTGGAGCAGCTTGGGTCTAATGGTAGTAGCAGCTCCTCGGACTGTAAATATGTTGTGTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACCCTCGCTTCAGCATTTCTTTATGCTCTCCTCACAAATCGGGTTCTACTTGTTGACCCTGGAACTGACATGGCTGATCTCTTCTGTGAACCGTTTCCTGAGGTTTCCTGGTTTCTGCCCCAAGATTTCCCGTTGAAACATAAATTCAGCAAATTCAACCACAACTCTCCTAATTGCTATGGGAAAATAATGAAGAACAATAGGAGCACAGATCCAAGTGGAATGATTTTGCCATCTCTTGTTTATCTTCATTTGGTCCATGATTATGATGATGATGACAAGCTTTTTTTCTGTGATCAACACCAATCTCTTCTGCACCAATCCCCTTGGCTTGTTATGAAAACAGACAACTATTTTGTCCCCTCTCTCTTTTTGATCCCATCATTCGAGAAAGAACTTCATGATCTTTTCCCAAATAAAGATACAGTTTTCCACTTCTTGGGTCGATATCTGATTCATCCCGTGAATTCAGTTTGGGGACTGATTACGAGATATTATCAGGCTTACTTGGCTAGAGCTAGTGAAAGAATAGGCATTCAGATTAGAGTGTTTGATACAGGAACTGGACCTTTTCAACACATCTTGGATCAGGTTTTGGACTGTACCCTGAAGGAGAATCTGTTGCCACAAACGGAAAGGCGAACAAATGTGGTCGGTCTGGCTAGTAGTCGAAAGTCAAAGGCCGTGCTGATAACTTCCTTGACCGCTGGTTACTTCGAGAAGTTGAGAGATATTTACTGGGAGAATCCGACGGTGACGGGAGAGAGAGTTAGTTTCTACCAACCAAGTCATGAGGAACACCAGCAAACTGAGAAGAGTATACATAACCAGAAGGCATTGGCAGAGATGTATTTGTTAAGTACAACTAATGTAGTGGTCACTAGTTCATGGTCGACCTTTGGATATGTGGCTCAAGGTCTTGGCGGTCTGAAACCATGGATATTGTACAAACCCGAGAATCGTACTGCACCGAATCCACCCTGCGGTCGAGCCATGTCCATGGAGCCCTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGCAAACTTGTTCCTCATGTGAGGCATTGCGAGGACATGGCCTGGGGGCTTAAGTTGGTTGATCAACAGGATTGA 1770 43.45 MKFKSTNRSFNSYPDENHASIRRLMRHTEDDHKNLWDKDPLSDLKNNQEMKCGFSSIRVMGMFAVLMMFISVVFSVSVVLRDPPSDAVIEGSDVWIPQWNSDPVDSKDGDLHRDIEAVDKLLSGLLSAKHEEGSCLSRYNSASYQRKLAYQPSSYLISKLRSYEDLHKRCGVYTESYNKTLEQLGSNGSSSSSDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKHKFSKFNHNSPNCYGKIMKNNRSTDPSGMILPSLVYLHLVHDYDDDDKLFFCDQHQSLLHQSPWLVMKTDNYFVPSLFLIPSFEKELHDLFPNKDTVFHFLGRYLIHPVNSVWGLITRYYQAYLARASERIGIQIRVFDTGTGPFQHILDQVLDCTLKENLLPQTERRTNVVGLASSRKSKAVLITSLTAGYFEKLRDIYWENPTVTGERVSFYQPSHEEHQQTEKSIHNQKALAEMYLLSTTNVVVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCGRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMAWGLKLVDQQD 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9446633 9448774 - CmoCh13G011990.1 Cmo13g01199 395254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo13g01199 589 Gene3D - 372 531 - -
Cmo13g01199 589 PANTHER 2-ALPHA-L-FUCOSYLTRANSFERASE, PUTATIVE-RELATED 23 588 - -
Cmo13g01199 589 PANTHER FUCOSYLTRANSFERASE 2-RELATED 23 588 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cmo13g01199 589 Pfam Xyloglucan fucosyltransferase 116 558 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cmo13g01199 589 Gene3D - 192 245 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g01199 Cmo-Chr13:9446633 Cmo16g00514 Cmo-Chr16:2484209 1.35E-167 dispersed
Cmo01g00838 Cmo-Chr1:4470695 Cmo13g01199 Cmo-Chr13:9446633 0 wgd
Cmo13g01199 Cmo-Chr13:9446633 Cmo04g01754 Cmo-Chr4:8850998 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo13g01199 K13681 - csv:101219153 986.867