Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00014 ATGAATTGTAACGAGGAGAATAGAGGGGGAGATGATAGGGAAACTGAGGCGCCAGTTTTGAGGCACTCTGTTGAGGCAGAAGGGAAACCAGTCATCCAGATTGGATCCATAACAGACCAACACTTGACCATCGATGATAATCTTCTCGTTGATCCAAAATTACTATTTATTGGATCCAAGATTGGCGAGGGTGCTCATGGGAAGGTTTATGAAGGCAGGTACCGGAACCAAATTGTGGCCATTAAAGTTCTTCATCGAGGGAGTACTGTAGAAGAAAGGGCAGCACTTGAAAATCGTTTTGCCCGTGAAGTAAATATGATGTCCCGAGTAAAACATGAAAATCTTGTCAAGTTTATTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAATAATCGTAAGCAACAGCTGGACCCTCGGCTGGCCATTAACTTTGCTTTGGATATTGCTCGTGCTATGGATTGTCTACATGCAAATGGGATTATACATAGAGATCTCAAACCTGATAATTTGTTGCTTACTGCAAACCAAAGGTCTGTGAAGCTTGCAGACTTTGGACTTGCTAGAGAAGAATCTGTGACCGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGCTATATAGCACTGTGACATTGCGGCAGGGAGAGAAGAAGCATTACAACAACAAGGTGGACGTTTACAGCTTTGGAATTGTGTTATGGGAACTGTTGACCAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTCAAGCAAGAGAGACCGAGTATTCCAGGCGACATACCTCCAGATCTAGCATTTATCGTACAGTCGTGTTGGGTGGAAGATTCTAAGATGAGGCCCAGCTTCAGCCAGATCATCCGCATGCTTAATGCATATCTATTTACACTCCCACCTCCTTCTTCGCCGTCTTCACCGTCTTCACCAAAATCTGACACAACGGAGACACCAACGTCTAGCAATGGTACTATCACCGAGTTCTCGGCTCGTGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCAGCTAAGAGGGCTAAGAACTCGCAATAA 1134 44.8 MNCNEENRGGDDRETEAPVLRHSVEAEGKPVIQIGSITDQHLTIDDNLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAIKVLHRGSTVEERAALENRFAREVNMMSRVKHENLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQQLDPRLAINFALDIARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDSKMRPSFSQIIRMLNAYLFTLPPPSSPSSPSSPKSDTTETPTSSNGTITEFSARARGKFGFLRQLFAAKRAKNSQ 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 77131 79955 - CmoCh14G000140.1 Cmo14g00014 395280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00014 377 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Cmo14g00014 377 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Cmo14g00014 377 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Cmo14g00014 377 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Cmo14g00014 377 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Cmo14g00014 377 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Cmo14g00014 377 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00014 377 PANTHER SERINE-THREONINE PROTEIN KINASE 19 353 - -
Cmo14g00014 377 Gene3D Transferase(Phosphotransferase) domain 1 138 339 - -
Cmo14g00014 377 MobiDBLite consensus disorder prediction 326 353 - -
Cmo14g00014 377 MobiDBLite consensus disorder prediction 333 353 - -
Cmo14g00014 377 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Cmo14g00014 377 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00014 377 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 19 353 - -
Cmo14g00014 377 CDD STKc_MAP3K-like 61 316 - -
Cmo14g00014 377 SUPERFAMILY Protein kinase-like (PK-like) 53 347 IPR011009 -
Cmo14g00014 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00186 Cmo14g00014 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02810 Cmo-Chr4:20168778 Cmo14g00014 Cmo-Chr14:77131 4.66E-139 dispersed
Cmo10g00095 Cmo-Chr10:410087 Cmo14g00014 Cmo-Chr14:77131 1.29E-153 dispersed
Cmo11g01659 Cmo-Chr11:11780192 Cmo14g00014 Cmo-Chr14:77131 2.72E-145 dispersed
Cmo14g00014 Cmo-Chr14:77131 Cmo14g00693 Cmo-Chr14:3568346 7.99E-144 dispersed
Cmo06g00185 Cmo-Chr6:1005905 Cmo14g00014 Cmo-Chr14:77131 3.03E-23 transposed
Cmo06g00186 Cmo-Chr6:1006451 Cmo14g00014 Cmo-Chr14:77131 3.48E-112 transposed
Cmo11g01136 Cmo-Chr11:6412475 Cmo14g00014 Cmo-Chr14:77131 8.21E-06 transposed
Cmo14g00014 Cmo-Chr14:77131 Cmo06g00184 Cmo-Chr6:1004284 5.68E-93 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74811 PF07714 PK_Tyr_Ser-Thr 5.90E-61 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00014 - - cmax:111481423 714.916