Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00037 ATGGGAAAAACCCACAACCCTCTGAGTGAGTTTCAGGTAAACCCACTTCAGTTCATGCAGATTCCTGTAGCAAAAACAGCTGATTGGGGCTCTAAATCACCTAATAAGAGCAGAAAGTGGAAGGGCCAACAATGGAGAAGCTGTTCTTCATACCTGATTGCTCTCTTTTTTGCTCATCTTTTGGCCTTTTCCCTTCAACCGGTCACTGGCCAGATGTGGGACGGAGTGGCTGTTACACAAGGAGATTTTCAAGCTCTTCAAGCTATAAAACACGAACTCATCGACCTAAAAGGAGCTTTGCGTAGCTGGAATGGCAGTACTGGAGCTTGTTCCGGGCAGTGGACAGGAATCAAGTGTGTGAAGGGGCAGGTCATTGCTATACAGCTTCCATGGAAGGCTCTTGCCGGCCGGATTTCCGACAGGATTGGGCAGCTCCGGGAACTTAGAAAGCTCAGCCTCCACGACAATGTGATCTCTGGCACAGTCCCTCGGTCGCTCGGCTTCCTTCCAAATCTCAGAGGAATTTATCTTTTCAACAACAGATTCTCAGGTTCTATTCCTCCTACAATTGGTAATCTTCCCCTTCTTCAAACTCTTGATTTGAGCAACAATTTGCTCACAGGAGAAATTCCTTCTGGTCTAGCAAATTCTACCAAATTGATTAGAGTTAATCTGAGTTACAATTCATTGTCGGGATCTATCCCAAGTAGCTTTACGCAGTCGTTTTCTCTTACAATTCTCGCCCTTCAGCACAACAATATTTCTGGGACCGTCCCAGATTCTTGGGGTGGTCGAACTTGCCCACTTGCGGTTATAACGCTTGATCATAATGCAATATCTGGGGCAATTCCAGCTTCCTTGAGTAAACTGGAATGGCTTCAAGAGATTTCGATCAGTGAAAATAAGATCTCTGGGGCTATACCAGATGGAATAGGCAGGCTGAAGAGACTTCGCCATTTGGATCTGTCGAACAACGTCATTAATGGTGGCTTCCCTTCAAGTTTCTCCAATCTATCCTCTCTTGAATTATTGAATGTTGAAAATAATCGCCTGGAAAGCCAGATTCCAGGAGATATTGATAGATTGCAGAATCTCTCAGTGGTCAAGCTTGGGAAGAATCGATTTAGTGGTGAGATTCCTGCAAGTTTGGGGAACATTTCTGCTATTACCCAACTTGATTTCTCAGAAAATAACTTCACGGGACAGATTCCAACATCGCTGGCCAGTTTGTTGAATCTGACCTCTTTCAACGTCTCTTACAACAATCTCTCTGGCCCTGTCCCGGTTCTCTTATCAAATAAGTTCAATGCGAGCTCCTTTGTAGGGAACCTTCAACTGTGTGGTTTTAGTGCTTCAACTCCATGTCAACCTGCATCCTCCCCACAGAATAGTACAACTCCATCATCTGAGGTCCGGAAACCGCATCGCCGCCGCAAACTCAGTGTGAAGGACATAATTCTGATAGCCGCTGGAGCTCTGTTGGTGCTTCTTCTGCTTCTCTGCTCAATTTTGCTGTGTTGTTTGTTATCAAAAAGAGCTGCTGCTAGAAAGAATGACAAAACGGCTGGCAAGCAAGCGACAGCGAGAAGCATCGAGAAGGAAGCACCAGGCAGCACCGAAGTGGGGACGGGTGAAGCCGGAGGAAAACTAGTTCATTTTGATGGGCCATTTGTTTTCACTGCTGATGATCTTCTGTGTGCGACTGCGGAGATCATGGGCAAGAGCACATATGGAACAGCATATAAAGCAACATTAGAAGATGGTAATGAAGTTGCAGTGAAAAGATTGAGGGAAAAAACAACAAAAGGGCAGAAGGAATTTGAAACTGAAGTTGTGGCACTCGGGAAAATTAGACACCCAAATCTACTTGCTCTTAGAGCTTACTACATAGGCCCCAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCTAGAGGAAGTCTCTCTTCCTTCCTTCATGCTCGCGGGCCGGAAACCATGGTCGATTGGCCAATGAGGATGAAAATAGCGATCGGAATCACGCAAGGCTTGAACTACCTCCACACAGAGGAGAATCTAATTCATGGGTACCTCACGTCCAGCAACATTCTGCTGGATGATCAAACCAATGCTCGGATTGCAGATTTTGGGCTTCCTAAGCTCATGACTTCAGCTGCAGCCACAAATGTGATTGCCACTGCAGGAACACAGGGCTATAATGCACCAGAGCTAACAAAAACCAAGAAAACCACAACAAAGACAGATGTCTACAGCCTTGGAGTCATAATATTGGAACTTTTGACAGGAAAATCTCCTGGAGAAGCCATGGATGGAATGGATTTACCTCAGTGGGTGGCCTCAATAGTAAAGGAGGAGTGGACAAATGAAGTGTTTGATCTGGAGCTTATGAAAGACGCACCAAATATTGGTGATGAACTGCTGAACACCTTAAAACTAGCCCTGCATTGTGTCGATCCATCACCAGCTGCTCGGCCAGACATTCAGCAAATTCTCCAGCAACTGGAGGAAATTAAGACTTCTACTTCTGGTGAGGATAGCGCCAAAACTCAACCAGCAACTGAATAG 2565 45.54 MGKTHNPLSEFQVNPLQFMQIPVAKTADWGSKSPNKSRKWKGQQWRSCSSYLIALFFAHLLAFSLQPVTGQMWDGVAVTQGDFQALQAIKHELIDLKGALRSWNGSTGACSGQWTGIKCVKGQVIAIQLPWKALAGRISDRIGQLRELRKLSLHDNVISGTVPRSLGFLPNLRGIYLFNNRFSGSIPPTIGNLPLLQTLDLSNNLLTGEIPSGLANSTKLIRVNLSYNSLSGSIPSSFTQSFSLTILALQHNNISGTVPDSWGGRTCPLAVITLDHNAISGAIPASLSKLEWLQEISISENKISGAIPDGIGRLKRLRHLDLSNNVINGGFPSSFSNLSSLELLNVENNRLESQIPGDIDRLQNLSVVKLGKNRFSGEIPASLGNISAITQLDFSENNFTGQIPTSLASLLNLTSFNVSYNNLSGPVPVLLSNKFNASSFVGNLQLCGFSASTPCQPASSPQNSTTPSSEVRKPHRRRKLSVKDIILIAAGALLVLLLLLCSILLCCLLSKRAAARKNDKTAGKQATARSIEKEAPGSTEVGTGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGQKEFETEVVALGKIRHPNLLALRAYYIGPKGEKLLVFDYMPRGSLSSFLHARGPETMVDWPMRMKIAIGITQGLNYLHTEENLIHGYLTSSNILLDDQTNARIADFGLPKLMTSAAATNVIATAGTQGYNAPELTKTKKTTTKTDVYSLGVIILELLTGKSPGEAMDGMDLPQWVASIVKEEWTNEVFDLELMKDAPNIGDELLNTLKLALHCVDPSPAARPDIQQILQQLEEIKTSTSGEDSAKTQPATE 854
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 184002 187159 + CmoCh14G000370.1 Cmo14g00037 395303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00037 854 Gene3D Ribonuclease Inhibitor 268 459 IPR032675 -
Cmo14g00037 854 MobiDBLite consensus disorder prediction 455 469 - -
Cmo14g00037 854 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 24 842 - -
Cmo14g00037 854 MobiDBLite consensus disorder prediction 455 475 - -
Cmo14g00037 854 SUPERFAMILY L domain-like 110 447 - -
Cmo14g00037 854 CDD STKc_IRAK 572 837 - -
Cmo14g00037 854 ProSiteProfiles Protein kinase domain profile. 566 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00037 854 SUPERFAMILY Protein kinase-like (PK-like) 570 838 IPR011009 -
Cmo14g00037 854 MobiDBLite consensus disorder prediction 519 545 - -
Cmo14g00037 854 SMART LRR_typ_2 410 433 IPR003591 -
Cmo14g00037 854 SMART LRR_typ_2 193 217 IPR003591 -
Cmo14g00037 854 SMART LRR_typ_2 314 337 IPR003591 -
Cmo14g00037 854 SMART LRR_typ_2 338 362 IPR003591 -
Cmo14g00037 854 SMART LRR_typ_2 145 169 IPR003591 -
Cmo14g00037 854 Pfam Leucine rich repeat 269 327 IPR001611 GO:0005515
Cmo14g00037 854 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 24 842 - -
Cmo14g00037 854 Pfam Leucine rich repeat N-terminal domain 81 119 IPR013210 -
Cmo14g00037 854 Gene3D Phosphorylase Kinase; domain 1 572 643 - -
Cmo14g00037 854 Pfam Leucine Rich Repeat 196 214 IPR001611 GO:0005515
Cmo14g00037 854 Gene3D Ribonuclease Inhibitor 81 194 IPR032675 -
Cmo14g00037 854 Gene3D Ribonuclease Inhibitor 195 267 IPR032675 -
Cmo14g00037 854 Pfam Protein tyrosine and serine/threonine kinase 570 834 IPR001245 GO:0004672|GO:0006468
Cmo14g00037 854 MobiDBLite consensus disorder prediction 833 854 - -
Cmo14g00037 854 Gene3D Transferase(Phosphotransferase) domain 1 644 852 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00334 Cmo14g00037 CCT
Cmo06g00205 Cmo14g00037 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00119 Cmo-Chr4:620315 Cmo14g00037 Cmo-Chr14:184002 0 dispersed
Cmo14g00037 Cmo-Chr14:184002 Cmo03g00727 Cmo-Chr3:6230533 2.86E-21 dispersed
Cmo14g00037 Cmo-Chr14:184002 Cmo04g01155 Cmo-Chr4:5892448 0 wgd
Cmo14g00037 Cmo-Chr14:184002 Cmo06g00205 Cmo-Chr6:1113470 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74812 PF07714 PK_Tyr_Ser-Thr 2.80E-41 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00037 - - bhj:120090401 1429.08