Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00041 ATGGCTATGGGAGTTTCGTTAGCTTGCTTTCTCATATTTGTTTTCTATGTTTCTGCTCTCTCTGCTCAACCTTCGTTTGTCTACCATGGATTCAATAATTCAGATCTTATCCTTCGTCAAGGAGCTTCTGTAGAGGCTTCTGGCTTGTTGAGGCTAACCGACAGCACCCAGTTCGTTATAGGCCAGGCTTTCAATCCTAATGCCCACCAGATGTTTGATAAAAGTTCTGAACCAGTTTTAGACGTTTCTTCTTTCAGCACAACTTTTGTGTTTGCCATAGTTCCATCAAGCTCCAGTTCGCCAGTTGGGTATGGCCTCGCCTTTGTTATAGCTCCATCGACCACATTTCCAGGTGCTGCAAGTGAACATTATTTGGGATTATTCAACTCCTCCAACAACGGCGACGCTTCCAATCATATCTTTGCAGTCGAATTCGATACTCTTAATGGCCACGACGACCCTCAAAATTCGAAGGGAAACCATGTCGGAATCAACAAGAATGGCATGCGATCAAATGCGTCTGAAACGGCTGAGTATTCTGACTATGGCTCTGATGTGAAAACGGAGGTGTATTTGGATAGTGGTGATCCAATCCAAGCTTGGATTGACTATAGTCGCCATAGTAAGGTTGTGAATGTCACGATAGCTCCTACAAATGTGGACAAACCAACTGAGCCATTGATTTCATATCGCATAAACCTGAATTCAGTTTTGAAAGAGACAATGTTTGTTGGGTTCTCTGCATCAACCGGAATAGAAACAAGCTTCCACTACATTTCAGGTTGGAGTTTTGCTATCAATGGACAAGCACCTGCGTTAAATGTTTCTCAGCTACCAAAACCACCGAAATTGGACATTTCTCCGCCCTCAAAATTCAATCCTCTACTCACCGTTGTTGTACCAATATTATCTGCCACGACATTTATAGGAATTTTGTTCTTAGCCTCTTTATTCAGAAGAAGAGTACGAGATGACAGCCTTGAGGAATGGGAAAGAGATTGTCCTCACAGATTTGGCTATAACGATCTTTATAAAGCCACAAAGGGATTTAAAGACTCTGAGCTCGTTGGATCAGGTGGCTTTGGCTCAGTATACAGAGGTGTCTTGCCTTCCACTGCAAGTGAAATTGCTGTGAAGAAGATAACACGAAATTCGACTCAGGGAATGAGGGAATTCGCTGCCGAGATCGAAAGTTTGGGCCGATTACGACACAAGAACTTGGTGAATCTCCAAGGATGGTGCAAGAAAAAGAATGATCTTCTCTTGGTTTATGACTATGTTCGAAATGGAAGCTTGGATTCTCTCCTCTACCATCCAAAACACAACTTTGTGCTGAATTGGGAACAAAGAATCAACATCCTCAAAGGCGTTGCTGGTGGATTGCTGTACCTACACGAAGAATGGGAGCAAGTAGTGATCCATCGAGATGTTAAGCCGAGTAATGTCTTGATAGATATCGACATGAATGCTCGATTAAGTGATTTCGGTCTCGCAAGGTTATACGACCACGACCAAGTATCGCATACAACCAGTGTCGTTGGCACCATTGGCTACATCTCACCCGAGTTGGCTCGCACCGGAAAAGCATCTAAAACCACGGATGTGTTCGCGTATGGAGTTCTAATCCTTGAAGTGGCTTGTGGAAGAAGACCTCTAGAATCAGATATATTCATATTGGTAGATTGGGTAATGGAATGCCATGAAAGAGGCCGTATTCTGGACGCAGCCGATCCAAAATTGAGTGCAGTTTATGACATGAATGAGATGGAGATGGTGCTGCAACTTGGGCTTCTTTGTTCCCACTACAACCCTGAAGCAAGGCCAAGCATGAGGCAAGTCACGAGATATCTTAATGGAGATGACCAAATTCTTTCTGTTCATCCTCCAAATTATTCTCGACTTACCTTCCAATCTAGCTCCGGATTCACTCAATTCATTCCACCGTCTTCGCAGACTTCATCTGCTAGTTTTATCTCAACCTCCATAGATCTAAGCAGGTAA 2001 43.48 MAMGVSLACFLIFVFYVSALSAQPSFVYHGFNNSDLILRQGASVEASGLLRLTDSTQFVIGQAFNPNAHQMFDKSSEPVLDVSSFSTTFVFAIVPSSSSSPVGYGLAFVIAPSTTFPGAASEHYLGLFNSSNNGDASNHIFAVEFDTLNGHDDPQNSKGNHVGINKNGMRSNASETAEYSDYGSDVKTEVYLDSGDPIQAWIDYSRHSKVVNVTIAPTNVDKPTEPLISYRINLNSVLKETMFVGFSASTGIETSFHYISGWSFAINGQAPALNVSQLPKPPKLDISPPSKFNPLLTVVVPILSATTFIGILFLASLFRRRVRDDSLEEWERDCPHRFGYNDLYKATKGFKDSELVGSGGFGSVYRGVLPSTASEIAVKKITRNSTQGMREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLLVYDYVRNGSLDSLLYHPKHNFVLNWEQRINILKGVAGGLLYLHEEWEQVVIHRDVKPSNVLIDIDMNARLSDFGLARLYDHDQVSHTTSVVGTIGYISPELARTGKASKTTDVFAYGVLILEVACGRRPLESDIFILVDWVMECHERGRILDAADPKLSAVYDMNEMEMVLQLGLLCSHYNPEARPSMRQVTRYLNGDDQILSVHPPNYSRLTFQSSSGFTQFIPPSSQTSSASFISTSIDLSR 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 206184 208184 + CmoCh14G000410.1 Cmo14g00041 395307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00041 666 ProSitePatterns Protein kinases ATP-binding region signature. 356 380 IPR017441 GO:0005524
Cmo14g00041 666 ProSiteProfiles Protein kinase domain profile. 350 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00041 666 CDD STKc_IRAK 356 619 - -
Cmo14g00041 666 SMART serkin_6 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00041 666 Gene3D Transferase(Phosphotransferase) domain 1 427 626 - -
Cmo14g00041 666 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 9 654 - -
Cmo14g00041 666 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Cmo14g00041 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 283 IPR013320 -
Cmo14g00041 666 MobiDBLite consensus disorder prediction 647 666 - -
Cmo14g00041 666 Gene3D - 22 277 - -
Cmo14g00041 666 Pfam Legume lectin domain 25 279 IPR001220 GO:0030246
Cmo14g00041 666 PANTHER - 9 654 - -
Cmo14g00041 666 CDD lectin_legume_LecRK_Arcelin_ConA 25 268 IPR001220 GO:0030246
Cmo14g00041 666 Pfam Protein kinase domain 351 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00041 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Cmo14g00041 666 SUPERFAMILY Protein kinase-like (PK-like) 334 650 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00913 Cmo-Chr1:5144874 Cmo14g00041 Cmo-Chr14:206184 0 dispersed
Cmo14g00041 Cmo-Chr14:206184 Cmo14g00123 Cmo-Chr14:542648 0 dispersed
Cmo18g01225 Cmo-Chr18:12135854 Cmo14g00041 Cmo-Chr14:206184 1.42E-13 dispersed
Cmo14g00041 Cmo-Chr14:206184 Cmo06g00208 Cmo-Chr6:1124871 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74813 PF00069 Pkinase 1.50E-50 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00041 - - csv:101216151 1079.32